Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc17g0007340 Simmondsia chinensis HOM05D003074 ORTHO05D002434 8.5e-54 213.4 106 100.0
AUR62012700 Chenopodium quinoa HOM05D003074 ORTHO05D002434 2.3e-14 82.4 118 48.3
AUR62021958 Chenopodium quinoa HOM05D003074 ORTHO05D002434 3.9e-14 81.6 117 48.7
Haze_06793 Corylus avellana HOM05D003074 ORTHO05D002434 2.1e-12 75.9 131 38.2
Manes.16G007700 Manihot esculenta HOM05D003074 ORTHO05D002434 2.1e-12 75.9 127 44.1
Sabra04G0008200 Salix brachista HOM05D003074 ORTHO05D002434 2.1e-12 75.9 130 36.9
Sed0026688 Sechium edule HOM05D003074 ORTHO05D002434 4.7e-12 74.7 114 39.5
Sc03g0008600 Simmondsia chinensis HOM05D003074 ORTHO05D002434 4.7e-12 74.7 115 37.4
Eucgr.E04061 Eucalyptus grandis HOM05D003074 ORTHO05D002434 6.2e-12 74.3 119 37.0
Sed0010919 Sechium edule HOM05D003074 ORTHO05D002434 1.1e-11 73.6 120 36.7
MBI02_g07159_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 1.4e-11 73.2 120 40.0
QL05p073377 Quercus lobata HOM05D003074 ORTHO05D002434 1.8e-11 72.8 132 37.9
CiPaw.09G091000 Carya illinoinensis HOM05D003074 ORTHO05D002434 3.1e-11 72.0 138 36.2
ClCG03G004770 Citrullus lanatus HOM05D003074 ORTHO05D002434 4.0e-11 71.6 120 35.8
Eucgr.E04063 Eucalyptus grandis HOM05D003074 ORTHO05D002434 4.0e-11 71.6 114 36.0
Eucgr.E04062 Eucalyptus grandis HOM05D003074 ORTHO05D002434 5.2e-11 71.2 123 35.0
Manes.17G038600 Manihot esculenta HOM05D003074 ORTHO05D002434 6.8e-11 70.9 125 40.8
Sed0007461 Sechium edule HOM05D003074 ORTHO05D002434 6.8e-11 70.9 118 39.8
Gohir.A04G016900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 8.9e-11 70.5 129 40.3
Gohir.D05G369300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 8.9e-11 70.5 129 40.3
Gorai.009G438000 Gossypium raimondii HOM05D003074 ORTHO05D002434 8.9e-11 70.5 129 40.3
Ciclev10009680m.g Citrus clementina HOM05D003074 ORTHO05D002434 1.2e-10 70.1 129 37.2
Eucgr.E04060 Eucalyptus grandis HOM05D003074 ORTHO05D002434 1.2e-10 70.1 124 35.5
Cpa.g.sc97.7 Carica papaya HOM05D003074 ORTHO05D002434 2.0e-10 69.3 122 37.7
Peaxi162Scf01097g00039 Petunia axillaris HOM05D003074 ORTHO05D002434 2.0e-10 69.3 114 35.1
Potri.004G015900 Populus trichocarpa HOM05D003074 ORTHO05D002434 4.4e-10 68.2 130 34.6
Cc09_g01730 Coffea canephora HOM05D003074 ORTHO05D002434 5.8e-10 67.8 129 39.5
Duzib235G0239 Durio zibethinus HOM05D003074 ORTHO05D002434 5.8e-10 67.8 118 35.6
PSO541G1700 Papaver somniferum HOM05D003074 ORTHO05D002434 5.8e-10 67.8 129 36.4
PSO675G3145 Papaver somniferum HOM05D003074 ORTHO05D002434 5.8e-10 67.8 129 36.4
TAR624G1270 Trochodendron aralioides HOM05D003074 ORTHO05D002434 5.8e-10 67.8 120 39.2
vmacro03644 Vaccinium macrocarpon HOM05D003074 ORTHO05D002434 5.8e-10 67.8 122 41.0
Cfa000232 Carpinus fangiana HOM05D003074 ORTHO05D002434 7.6e-10 67.4 133 36.1
TWI38G1886 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 7.6e-10 67.4 122 37.7
MBI18_g22612_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 9.9e-10 67.0 117 39.3
Eucgr.E04064 Eucalyptus grandis HOM05D003074 ORTHO05D002434 1.3e-09 66.6 115 34.8
TAR626G1667 Trochodendron aralioides HOM05D003074 ORTHO05D002434 1.7e-09 66.2 128 36.7
MELO3C002460.2 Cucumis melo HOM05D003074 ORTHO05D002434 2.2e-09 65.9 121 36.4
Duzib268G1655 Durio zibethinus HOM05D003074 ORTHO05D002434 2.2e-09 65.9 131 39.7
Glyma.15G107300 Glycine max HOM05D008677 ORTHO05D002434 2.9e-09 65.5 130 33.8
Gorai.002G088300 Gossypium raimondii HOM05D003074 ORTHO05D002434 2.9e-09 65.5 116 37.9
CSS0019776 Camellia sinensis var. sinensis HOM05D003074 ORTHO05D002434 3.8e-09 65.1 109 39.4
Potri.011G003100 Populus trichocarpa HOM05D003074 ORTHO05D002434 3.8e-09 65.1 128 35.2
AUR62015772 Chenopodium quinoa HOM05D003074 ORTHO05D002434 1.1e-08 63.5 114 36.0
Ca_00651_v3 Cicer arietinum L. HOM05D008677 ORTHO05D002434 1.1e-08 63.5 134 33.6
Cc05_g13710 Coffea canephora HOM05D003074 ORTHO05D002434 1.1e-08 63.5 139 31.7
Haze_09674 Corylus avellana HOM05D003074 ORTHO05D002434 1.1e-08 63.5 127 36.2
Gohir.A01G079300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 1.1e-08 63.5 116 37.1
PGR031G1144 Punica granatum HOM05D003074 ORTHO05D002434 1.1e-08 63.5 114 35.1
QL08p010341 Quercus lobata HOM05D003074 ORTHO05D002434 1.4e-08 63.2 136 37.5
PGSC0003DMG400001089 Solanum tuberosum HOM05D003074 ORTHO05D002434 1.4e-08 63.2 125 36.8
Rhsim13G0146000 Rhododendron simsii HOM05D002761 ORTHO05D003351 1.9e-08 62.8 121 38.0
RhsimUnG0109700 Rhododendron simsii HOM05D003074 ORTHO05D002434 1.9e-08 62.8 121 38.0
EL10Ac4g07810 Beta vulgaris HOM05D003074 ORTHO05D002434 3.2e-08 62.0 108 35.2
Eucgr.E04065 Eucalyptus grandis HOM05D003074 ORTHO05D002434 3.2e-08 62.0 124 31.5
Hma1.2p1_0673F.1_g201330 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 3.2e-08 62.0 129 36.4
Sc16g0006080 Simmondsia chinensis HOM05D003074 ORTHO05D002434 3.2e-08 62.0 115 35.7
AUR62020442 Chenopodium quinoa HOM05D003074 ORTHO05D002434 4.1e-08 61.6 112 34.8
Nn5g29371 Nelumbo nucifera HOM05D003074 ORTHO05D002434 4.1e-08 61.6 127 35.4
PGR004G0474 Punica granatum HOM05D003074 ORTHO05D002434 4.1e-08 61.6 132 34.8
Thecc.07G037400 Theobroma cacao HOM05D003074 ORTHO05D002434 4.1e-08 61.6 135 35.6
Psat1g181240 Pisum sativum HOM05D008677 ORTHO05D002434 5.4e-08 61.2 134 32.1
COL.COLO4_09658 Corchorus olitorius HOM05D003074 ORTHO05D002434 9.2e-08 60.5 138 34.8
Eucgr.E04066 Eucalyptus grandis HOM05D003074 ORTHO05D002434 9.2e-08 60.5 116 34.5
FAN11G2929 Fragaria x ananassa HOM05D003074 ORTHO05D002434 9.2e-08 60.5 145 32.4
RhsimUnG0250800 Rhododendron simsii HOM05D003074 ORTHO05D002434 9.2e-08 60.5 115 37.4
ATR0752G060 Amborella trichopoda HOM05D003074 ORTHO05D002434 1.2e-07 60.1 111 34.2
MSTRG.6917 Avicennia marina HOM05D003074 ORTHO05D002434 1.6e-07 59.7 122 35.2
CiPaw.10G070500 Carya illinoinensis HOM05D003074 ORTHO05D002434 1.6e-07 59.7 137 34.3
CDE05G1751 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 1.6e-07 59.7 122 35.2
FAN16G0504 Fragaria x ananassa HOM05D003074 ORTHO05D002434 1.6e-07 59.7 145 32.4
FAN25G2410 Fragaria x ananassa HOM05D003074 ORTHO05D002434 1.6e-07 59.7 145 32.4
Phvul.006G150100 Phaseolus vulgaris HOM05D008677 ORTHO05D002434 1.6e-07 59.7 127 33.9
Thecc.06G219600 Theobroma cacao HOM05D003074 ORTHO05D002434 2.1e-07 59.3 123 34.1
TWI38G1232 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 2.1e-07 59.3 130 36.2
Aqoxy1G02174 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 2.7e-07 58.9 130 39.2
CDE05G3459 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 2.7e-07 58.9 121 35.5
FvH4_3g22640 Fragaria vesca HOM05D003074 ORTHO05D002434 2.7e-07 58.9 145 31.7
EL10Ac4g07811 Beta vulgaris HOM05D003074 ORTHO05D002434 3.5e-07 58.5 114 34.2
DCAR_004216 Daucus carota HOM05D003074 ORTHO05D002434 3.5e-07 58.5 128 35.9
DCAR_008152 Daucus carota HOM05D003074 ORTHO05D002434 3.5e-07 58.5 124 34.7
Glyma.17G014500 Glycine max HOM05D008677 ORTHO05D002434 3.5e-07 58.5 129 30.2
PGSC0003DMG400029820 Solanum tuberosum HOM05D003074 ORTHO05D002434 3.5e-07 58.5 114 35.1
Cfa020350 Carpinus fangiana HOM05D003074 ORTHO05D002434 4.6e-07 58.2 131 34.4
Hma1.2p1_1222F.1_g268140 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 4.6e-07 58.2 129 34.9
Lalb_Chr15g0087561 Lupinus albus HOM05D008677 ORTHO05D002434 4.6e-07 58.2 127 35.4
Nn1g03544 Nelumbo nucifera HOM05D003074 ORTHO05D002434 4.6e-07 58.2 114 34.2
Zm00001eb322670 Zea mays HOM05D055822 ORTHO05D049709 4.6e-07 58.2 119 38.7
arahy.Tifrunner.gnm1.ann1.8P9XRD Arachis hypogaea HOM05D008677 ORTHO05D002434 7.8e-07 57.4 137 34.3
Duzib213G0915 Durio zibethinus HOM05D003074 ORTHO05D002434 7.8e-07 57.4 130 35.4
Actinidia35342 Actinidia chinensis HOM05D003074 ORTHO05D002434 1.0e-06 57.0 97 40.2
CiPaw.12G129500 Carya illinoinensis HOM05D003074 ORTHO05D002434 1.0e-06 57.0 137 32.8
ClCG05G014310 Citrullus lanatus HOM05D003074 ORTHO05D002434 1.0e-06 57.0 120 32.5
Dinv13888 Davidia involucrata HOM05D003074 ORTHO05D002434 1.0e-06 57.0 94 41.5
Thhalv10021814m.g Eutrema salsugineum HOM05D003074 ORTHO05D002434 1.0e-06 57.0 117 35.0
Glyma.07G259900 Glycine max HOM05D008677 ORTHO05D002434 1.0e-06 57.0 129 31.8
Lj6g0026915 Lotus japonicus HOM05D008677 ORTHO05D002434 1.0e-06 57.0 127 33.9
Oeu063916.1 Olea europaea HOM05D003074 ORTHO05D002434 1.0e-06 57.0 108 35.2
Cc09_g09730 Coffea canephora HOM05D003074 ORTHO05D002434 1.7e-06 56.2 139 33.1
FAN21G2959 Fragaria x ananassa HOM05D003074 ORTHO05D002434 1.7e-06 56.2 146 31.5
Gohir.D01G066350 Gossypium hirsutum HOM05D003074 ORTHO05D002434 1.7e-06 56.2 100 37.0
MD11G1218800 Malus domestica HOM05D003074 ORTHO05D002434 1.7e-06 56.2 129 36.4
Manes.03G129100 Manihot esculenta HOM05D003074 ORTHO05D002434 1.7e-06 56.2 128 35.9
Glyma.17G014100 Glycine max HOM05D008677 ORTHO05D002434 2.3e-06 55.8 131 29.0
Nitab4.5_0009398g0020 Nicotiana tabacum HOM05D003074 ORTHO05D002434 2.3e-06 55.8 114 36.8
Prupe.4G212400 Prunus persica HOM05D003074 ORTHO05D002434 3.0e-06 55.5 130 33.1
AUR62020443 Chenopodium quinoa HOM05D003074 ORTHO05D002434 3.9e-06 55.1 119 33.6
Medtr3g051510 Medicago truncatula HOM05D003074 ORTHO05D002434 3.9e-06 55.1 111 36.0
Dinv40751 Davidia involucrata HOM05D003074 ORTHO05D002434 5.1e-06 54.7 130 34.6
TAR624G0488 Trochodendron aralioides HOM05D003074 ORTHO05D002434 5.1e-06 54.7 105 36.2
Aqoxy1G02176 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 8.6e-06 53.9 125 34.4
BcaB06g26099 Brassica carinata HOM05D010457 ORTHO05D002434 8.6e-06 53.9 127 33.1
ECA240G4169 Erigeron canadensis HOM05D003074 ORTHO05D002434 8.6e-06 53.9 92 35.9
MBI02_g40709_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 8.6e-06 53.9 128 31.2
MD10G1320500 Malus domestica HOM05D003074 ORTHO05D002434 8.6e-06 53.9 142 32.4
unitig_85.g27325 Utricularia gibba HOM05D003074 ORTHO05D002434 8.6e-06 53.9 105 36.2


User provided reference genes

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