Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc17g0006920 Simmondsia chinensis HOM05D005409 ORTHO05D006456 0.0e+00 1207.6 611 100.0
Hund23539 Selenicereus undatus HOM05D005409 ORTHO05D006456 4.1e-185 652.1 631 58.3
AUR62012574 Chenopodium quinoa HOM05D005409 ORTHO05D006456 4.4e-171 605.5 638 57.2
AUR62014626 Chenopodium quinoa HOM05D005409 ORTHO05D006456 1.5e-163 580.5 638 56.1
Duzib192G0995 Durio zibethinus HOM05D005409 ORTHO05D006456 3.8e-162 575.9 632 54.3
EL10As6g23684 Beta vulgaris HOM05D005409 ORTHO05D006456 7.9e-160 568.2 646 54.3
Dinv18952 Davidia involucrata HOM05D005409 ORTHO05D006456 2.4e-156 556.6 661 51.6
Cfa016400 Carpinus fangiana HOM05D005409 ORTHO05D006456 6.9e-156 555.1 635 53.2
Thecc.06G207400 Theobroma cacao HOM05D005409 ORTHO05D006456 1.5e-155 553.9 631 53.1
Ah.14g088510 Amaranthus hybridus HOM05D005409 ORTHO05D006456 1.4e-153 547.4 641 54.1
Gohir.D09G070300 Gossypium hirsutum HOM05D005409 ORTHO05D006456 1.9e-153 547.0 632 51.6
Prupe.4G030000 Prunus persica HOM05D005409 ORTHO05D006456 1.9e-153 547.0 627 51.5
Gorai.006G084700 Gossypium raimondii HOM05D005409 ORTHO05D006456 2.1e-152 543.5 639 51.2
MD05G1335400 Malus domestica HOM05D005409 ORTHO05D006456 2.1e-152 543.5 627 52.3
TAR624G1144 Trochodendron aralioides HOM05D005409 ORTHO05D006456 8.7e-151 538.1 639 51.0
COL.COLO4_33645 Corchorus olitorius HOM05D005409 ORTHO05D006456 6.2e-149 531.9 632 53.0
Duzib235G0390 Durio zibethinus HOM05D005409 ORTHO05D006456 5.3e-148 528.9 644 50.0
Gohir.A09G070200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 1.3e-146 524.2 631 50.6
FAN25G1204 Fragaria x ananassa HOM05D005409 ORTHO05D006456 4.6e-144 515.8 667 49.3
Gohir.A10G017200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 7.9e-144 515.0 625 51.0
Nn1g06923 Nelumbo nucifera HOM05D005409 ORTHO05D006456 7.9e-144 515.0 639 51.0
Gohir.D10G017400 Gossypium hirsutum HOM05D005409 ORTHO05D006456 1.8e-143 513.8 626 51.0
Gorai.011G019300 Gossypium raimondii HOM05D005409 ORTHO05D006456 1.8e-143 513.8 626 51.0
MD10G1310800 Malus domestica HOM05D005409 ORTHO05D006456 1.5e-142 510.8 634 50.8
QL05p077347 Quercus lobata HOM05D005409 ORTHO05D006456 7.4e-142 508.4 681 48.2
CiPaw.10G113200 Carya illinoinensis HOM05D005409 ORTHO05D006456 2.8e-141 506.5 634 50.3
Glyma.07G187300 Glycine max HOM05D005409 ORTHO05D006456 4.8e-141 505.8 633 50.1
Phvul.002G218900 Phaseolus vulgaris HOM05D005409 ORTHO05D006456 1.4e-140 504.2 633 50.4
TAR626G0140 Trochodendron aralioides HOM05D005409 ORTHO05D006456 2.6e-139 500.0 637 49.1
Actinidia11830 Actinidia chinensis HOM05D005409 ORTHO05D006456 7.7e-139 498.4 658 47.9
Manes.17G030300 Manihot esculenta HOM05D005409 ORTHO05D006456 1.0e-138 498.0 632 49.2
Ciclev10014614m.g Citrus clementina HOM05D005409 ORTHO05D006456 5.5e-137 492.3 628 48.4
Glyma.08G061800 Glycine max HOM05D005409 ORTHO05D006456 1.6e-136 490.7 633 48.8
PGSC0003DMG400021722 Solanum tuberosum HOM05D005409 ORTHO05D006456 7.9e-136 488.4 645 45.9
VMungo0251G1750 Vigna mungo HOM05D005409 ORTHO05D006456 1.8e-135 487.3 643 48.8
CANSAT35G0463 Cannabis sativa HOM05D005409 ORTHO05D006456 8.8e-135 485.0 632 49.7
Sopen02g024640 Solanum pennellii HOM05D005409 ORTHO05D006456 1.3e-133 481.1 646 46.0
Nitab4.5_0006456g0010 Nicotiana tabacum HOM05D005409 ORTHO05D006456 6.3e-133 478.8 650 46.8
CiPaw.10G113100 Carya illinoinensis HOM05D005409 ORTHO05D006456 1.8e-132 477.2 630 48.6
Solyc02g079880.3 Solanum lycopersicum HOM05D005409 ORTHO05D006456 2.4e-132 476.9 645 45.3
Cc02_g11840 Coffea canephora HOM05D005409 ORTHO05D006456 3.1e-132 476.5 652 46.2
Lj4g0002185 Lotus japonicus HOM05D005409 ORTHO05D006456 4.1e-132 476.1 642 48.9
Nitab4.5_0000503g0080 Nicotiana tabacum HOM05D005409 ORTHO05D006456 1.2e-131 474.6 652 46.8
Hma1.2p1_0809F.1_g221770 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 1.6e-128 464.2 654 47.9
ClCG03G005190 Citrullus lanatus HOM05D005409 ORTHO05D006456 6.1e-128 462.2 625 47.8
Lj2A276T57 Lonicera japonica HOM05D005409 ORTHO05D006456 2.3e-127 460.3 644 48.1
Ca_18454_v3 Cicer arietinum L. HOM05D005409 ORTHO05D006456 2.8e-125 453.4 637 49.0
CsaV3_1G011380 Cucumis sativus L. HOM05D005409 ORTHO05D006456 9.1e-124 448.4 636 46.1
Peaxi162Scf00759g00211 Petunia axillaris HOM05D005409 ORTHO05D006456 9.1e-124 448.4 653 44.6
Lalb_Chr09g0327161 Lupinus albus HOM05D005409 ORTHO05D006456 6.5e-122 442.2 631 47.9
Rhsim02G0115600 Rhododendron simsii HOM05D005409 ORTHO05D006456 4.7e-120 436.0 697 44.0
Sed0006411 Sechium edule HOM05D005409 ORTHO05D006456 4.7e-120 436.0 626 46.6
TWI63G1109 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 3.0e-119 433.3 648 45.8
Lj1A1221T57 Lonicera japonica HOM05D005409 ORTHO05D006456 5.2e-119 432.6 624 47.1
MELO3C002515.2 Cucumis melo HOM05D005409 ORTHO05D006456 1.3e-117 427.9 631 45.2
Lalb_Chr16g0383301 Lupinus albus HOM05D005409 ORTHO05D006456 2.2e-117 427.2 634 46.4
ECA236G3644 Erigeron canadensis HOM05D005409 ORTHO05D006456 4.8e-117 426.0 637 45.2
GSVIVG01006401001 Vitis vinifera HOM05D005409 ORTHO05D006456 3.1e-116 423.3 645 44.3
Medtr4g092050 Medicago truncatula HOM05D005409 ORTHO05D006456 2.6e-115 420.2 629 47.1
PSO541G2946 Papaver somniferum HOM05D005409 ORTHO05D006456 1.3e-114 417.9 650 44.9
Potri.011G031900 Populus trichocarpa HOM05D005409 ORTHO05D006456 1.7e-114 417.5 630 44.9
PSO675G2591 Papaver somniferum HOM05D005409 ORTHO05D006456 2.2e-114 417.2 650 44.6
Psat0s935g0040 Pisum sativum HOM05D005409 ORTHO05D006456 2.2e-114 417.2 637 46.2
Eucgr.E03596 Eucalyptus grandis HOM05D005409 ORTHO05D006456 5.0e-114 416.0 534 48.1
vmacro15844 Vaccinium macrocarpon HOM05D005409 ORTHO05D006456 3.6e-112 409.8 665 42.6
MBI02_g26225_MAGBIO Magnolia biondii HOM05D005409 ORTHO05D006456 1.4e-111 407.9 642 45.5
MSTRG.15953 Avicennia marina HOM05D005409 ORTHO05D006456 4.0e-111 406.4 649 43.1
Oeu016146.1 Olea europaea HOM05D005409 ORTHO05D006456 3.7e-109 399.8 643 42.3
Aqoxy1G03830 Aquilegia oxysepala HOM05D005409 ORTHO05D006456 4.8e-109 399.4 672 42.4
TPR.G13934 Trifolium pratense HOM05D005409 ORTHO05D006456 1.1e-108 398.3 642 46.4
DCAR_008109 Daucus carota HOM05D005409 ORTHO05D006456 2.4e-108 397.1 631 43.4
FvH4_3g03030 Fragaria vesca HOM05D005409 ORTHO05D006456 1.9e-105 387.5 486 50.8
Hma1.2p1_0809F.1_g221760 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 2.1e-104 384.0 539 47.7
Oeu050809.4 Olea europaea HOM05D005409 ORTHO05D006456 3.6e-104 383.3 649 40.8
Sabra11G0025100 Salix brachista HOM05D005409 ORTHO05D006456 5.2e-103 379.4 628 43.6
CSS0017238 Camellia sinensis var. sinensis HOM05D005409 ORTHO05D006456 2.0e-102 377.5 616 43.3
Haze_06671 Corylus avellana HOM05D005409 ORTHO05D006456 2.0e-102 377.5 432 51.9
PGR042G2399 Punica granatum HOM05D005409 ORTHO05D006456 7.5e-102 375.6 640 42.7
Cpa.g.sc81.2 Carica papaya HOM05D005409 ORTHO05D006456 1.2e-99 368.2 436 49.1
DCAR_004174 Daucus carota HOM05D005409 ORTHO05D006456 1.6e-99 367.9 611 43.4
HanXRQChr15g0482781 Helianthus annuus HOM05D005409 ORTHO05D006456 3.5e-99 366.7 647 42.8
HanXRQChr15g0482771 Helianthus annuus HOM05D005409 ORTHO05D006456 1.5e-97 361.3 643 42.3
THA.LOC104809524 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 1.9e-97 360.9 629 43.7
GSVIVG01030650001 Vitis vinifera HOM05D005409 ORTHO05D006456 4.2e-97 359.8 631 43.6
Migut.M01258 Erythranthe guttata HOM05D005409 ORTHO05D006456 9.8e-94 348.6 637 41.9
Sabra11G0019200 Salix brachista HOM05D005409 ORTHO05D006456 3.7e-93 346.7 628 41.7
Lsat_1_v5_gn_7_18380 Lactuca sativa HOM05D005409 ORTHO05D006456 3.2e-92 343.6 627 42.4
TWI38G0167 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 1.2e-91 341.7 591 42.3
A06p08100 Brassica napus HOM05D005409 ORTHO05D006456 1.7e-90 337.8 624 41.5
Potri.007G119200 Populus trichocarpa HOM05D005409 ORTHO05D006456 1.7e-90 337.8 653 39.5
Sp1g10100 Schrenkiella parvula HOM05D005409 ORTHO05D006456 6.6e-90 335.9 621 41.5
THA.LOC104818924 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 4.3e-89 333.2 594 43.3
Actinidia24044 Actinidia chinensis HOM05D005409 ORTHO05D006456 3.6e-88 330.1 490 43.9
AT1G11480 Arabidopsis thaliana HOM05D005409 ORTHO05D006456 3.6e-88 330.1 627 41.9
BraA06t24009Z Brassica rapa HOM05D005409 ORTHO05D006456 4.7e-88 329.7 618 40.9
BcaC05g25024 Brassica carinata HOM05D005409 ORTHO05D006456 1.8e-87 327.8 621 41.4
CDE12G0800 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 2.3e-87 327.4 500 45.0
Actinidia26760 Actinidia chinensis HOM05D005409 ORTHO05D006456 5.2e-87 326.2 541 42.3
C05p09680 Brassica napus HOM05D005409 ORTHO05D006456 3.4e-86 323.6 621 41.1
CARHR011750 Cardamine hirsuta HOM05D005409 ORTHO05D006456 6.4e-85 319.3 630 41.1
Thhalv10007161m.g Eutrema salsugineum HOM05D005409 ORTHO05D006456 6.4e-85 319.3 627 41.0
Sabra17G0028000 Salix brachista HOM05D005409 ORTHO05D006456 1.4e-84 318.2 700 37.0
AL1G22590 Arabidopsis lyrata HOM05D005409 ORTHO05D006456 7.0e-84 315.8 627 41.1
Potri.017G041300 Populus trichocarpa HOM05D005409 ORTHO05D006456 2.7e-83 313.9 640 39.7
BolC5t29709H Brassica oleracea HOM05D005409 ORTHO05D006456 3.5e-83 313.5 605 40.8
CDE01G0308 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 9.5e-81 305.4 629 39.0
Aa31LG1G3270 Aethionema arabicum HOM05D005409 ORTHO05D006456 2.1e-80 304.3 638 40.4
Actinidia26959 Actinidia chinensis HOM05D005409 ORTHO05D006456 2.8e-80 303.9 470 44.7
Carub.0001s1109 Capsella rubella HOM05D005409 ORTHO05D006456 2.8e-80 303.9 630 38.7
SalBow8G4343 Salvia bowleyana HOM05D005409 ORTHO05D006456 6.8e-79 299.3 471 44.4
RcHm_v2.0_Chr5g0004681 Rosa chinensis HOM05D005409 ORTHO05D006456 1.3e-77 295.0 474 43.2
Sabra07G0096100 Salix brachista HOM05D005409 ORTHO05D006456 1.1e-76 292.0 761 33.9
SGA_v2.0_scaffold7G03896 Striga asiatica HOM05D005409 ORTHO05D006456 1.9e-76 291.2 691 36.3
arahy.Tifrunner.gnm1.ann1.XK38U2 Arachis hypogaea HOM05D005409 ORTHO05D006456 7.3e-73 279.3 631 39.5
Ah.09g237100 Amaranthus hybridus HOM05D000067 ORTHO05D006456 2.0e-70 271.2 606 37.0
HPP92_000870 Vanilla planifolia HOM05D005409 ORTHO05D006456 9.9e-70 268.9 649 38.1
arahy.Tifrunner.gnm1.ann1.QZ9QK3 Arachis hypogaea HOM05D005409 ORTHO05D006456 2.4e-68 264.2 669 37.1
Atru.chr6.3116 Acer truncatum HOM05D005409 ORTHO05D006456 5.6e-65 253.1 463 40.8
Oeu050499.1 Olea europaea HOM05D005409 ORTHO05D006456 6.8e-63 246.1 434 40.6
Atru.chr10.2048 Acer truncatum HOM05D005409 ORTHO05D006456 7.6e-62 242.7 357 46.2
BcaNung07116 Brassica carinata HOM05D005409 ORTHO05D006456 1.7e-61 241.5 429 41.7
ATR0804G077 Amborella trichopoda HOM05D005409 ORTHO05D006456 9.0e-55 219.2 739 34.4
GSVIVG01006635001 Vitis vinifera HOM05D005409 ORTHO05D006456 2.2e-53 214.5 166 65.1
Os07g0546100 Oryza sativa ssp. japonica HOM05D005409 ORTHO05D006456 2.7e-51 207.6 650 32.3
RcHm_v2.0_Chr5g0004671 Rosa chinensis HOM05D005409 ORTHO05D006456 6.9e-47 193.0 143 69.9
Zm00001eb323520 Zea mays HOM05D005409 ORTHO05D006456 1.5e-46 191.8 643 32.7
Atru.chr10.2047 Acer truncatum HOM05D005409 ORTHO05D006456 2.6e-38 164.5 242 46.3
Cpa.g.sc81.1 Carica papaya HOM05D005409 ORTHO05D006456 3.1e-31 141.0 190 49.5
Zm00001eb106500 Zea mays HOM05D005409 ORTHO05D006456 4.2e-28 130.6 438 32.6
SMO118G0050 Selaginella moellendorffii HOM05D005409 ORTHO05D006456 1.3e-21 109.0 708 27.7
Atru.chr6.3115 Acer truncatum HOM05D005409 ORTHO05D006456 1.4e-18 99.0 193 43.5
Mapoly0113s0049 Marchantia polymorpha HOM05D005409 ORTHO05D006456 1.7e-16 92.0 967 23.8
Pp3c20_3440 Physcomitrium patens HOM05D005409 ORTHO05D006456 3.1e-15 87.8 221 37.1
AagrBONN_evm.TU.Sc2ySwM_228.455 Anthoceros agrestis HOM05D005409 ORTHO05D006456 4.1e-15 87.4 119 47.1
Haze_06667 Corylus avellana HOM05D005409 ORTHO05D006456 7.7e-14 83.2 185 35.7
QL05p012359 Quercus lobata HOM05D005409 ORTHO05D006456 2.2e-13 81.6 123 40.7
CBR_g36658 Chara braunii HOM05D005409 ORTHO05D006456 1.4e-12 79.0 112 44.6
Actinidia26960 Actinidia chinensis HOM05D005409 ORTHO05D006456 1.5e-09 68.9 80 55.0


User provided reference genes

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