Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc17g0005010 Simmondsia chinensis HOM05D007650 ORTHO05D009695 7.7e-167 590.5 318 100.0
FAN11G2937 Fragaria x ananassa HOM05D007650 ORTHO05D009695 2.1e-108 396.4 290 75.9
FvH4_3g05890 Fragaria vesca HOM05D007650 ORTHO05D009695 6.2e-108 394.8 290 75.9
Dinv30717 Davidia involucrata HOM05D007650 ORTHO05D009695 8.1e-108 394.4 280 77.1
TAR629G0225 Trochodendron aralioides HOM05D007650 ORTHO05D009695 8.1e-108 394.4 261 80.8
FAN16G2223 Fragaria x ananassa HOM05D007650 ORTHO05D009695 1.1e-107 394.0 308 73.4
MD05G1286900 Malus domestica HOM05D007650 ORTHO05D009695 4.0e-107 392.1 312 71.5
Hund21519 Selenicereus undatus HOM05D007650 ORTHO05D009695 5.2e-107 391.7 277 77.3
Cfa000966 Carpinus fangiana HOM05D007650 ORTHO05D009695 1.5e-106 390.2 282 77.7
FAN21G2668 Fragaria x ananassa HOM05D007650 ORTHO05D009695 2.0e-106 389.8 276 77.5
DCAR_005107 Daucus carota HOM05D007650 ORTHO05D009695 2.6e-106 389.4 308 70.1
Haze_05565 Corylus avellana HOM05D007650 ORTHO05D009695 7.6e-106 387.9 282 78.0
Atru.chr10.1319 Acer truncatum HOM05D007650 ORTHO05D009695 9.9e-106 387.5 286 76.2
Sabra11G0064400 Salix brachista HOM05D007650 ORTHO05D009695 1.3e-105 387.1 299 74.9
CiPaw.09G126000 Carya illinoinensis HOM05D007650 ORTHO05D009695 1.7e-105 386.7 282 77.7
Potri.011G080900 Populus trichocarpa HOM05D007650 ORTHO05D009695 1.7e-105 386.7 297 75.1
RcHm_v2.0_Chr5g0013551 Rosa chinensis HOM05D007650 ORTHO05D009695 2.2e-105 386.3 306 71.6
Actinidia16723 Actinidia chinensis HOM05D007650 ORTHO05D009695 2.9e-105 386.0 321 69.5
Lj1A1185T62 Lonicera japonica HOM05D007650 ORTHO05D009695 6.4e-105 384.8 262 80.2
Hma1.2p1_0137F.1_g062480 Hydrangea macrophylla HOM05D007650 ORTHO05D009695 8.4e-105 384.4 285 75.4
vmacro09097 Vaccinium macrocarpon HOM05D007650 ORTHO05D009695 1.4e-104 383.6 287 76.0
EL10As10g23973 Beta vulgaris HOM05D007650 ORTHO05D009695 2.4e-104 382.9 293 72.7
Manes.17G068200 Manihot esculenta HOM05D007650 ORTHO05D009695 2.4e-104 382.9 282 75.9
QL05p059009 Quercus lobata HOM05D007650 ORTHO05D009695 2.4e-104 382.9 297 73.7
Nn3g20684 Nelumbo nucifera HOM05D007650 ORTHO05D009695 3.2e-104 382.5 286 74.1
CANSAT35G2040 Cannabis sativa HOM05D007650 ORTHO05D009695 5.4e-104 381.7 261 78.9
Cc09_g08850 Coffea canephora HOM05D007650 ORTHO05D009695 5.4e-104 381.7 280 76.1
MBI07_g15281_MAGBIO Magnolia biondii HOM05D007650 ORTHO05D009695 7.1e-104 381.3 261 78.9
Migut.H01373 Erythranthe guttata HOM05D007650 ORTHO05D009695 9.3e-104 380.9 307 70.4
arahy.Tifrunner.gnm1.ann1.HZCZ32 Arachis hypogaea HOM05D007650 ORTHO05D009695 1.2e-103 380.6 262 78.6
Sopen02g019910 Solanum pennellii HOM05D007650 ORTHO05D009695 2.1e-103 379.8 315 69.8
Gorai.010G238900 Gossypium raimondii HOM05D007650 ORTHO05D009695 6.0e-103 378.3 283 73.5
Gohir.D06G204800 Gossypium hirsutum HOM05D007650 ORTHO05D009695 7.8e-103 377.9 283 73.5
Medtr4g094625 Medicago truncatula HOM05D007650 ORTHO05D009695 7.8e-103 377.9 286 74.5
Duzib192G0135 Durio zibethinus HOM05D007650 ORTHO05D009695 1.0e-102 377.5 315 68.3
Lj4g0007964 Lotus japonicus HOM05D007650 ORTHO05D009695 1.0e-102 377.5 296 71.6
Rhsim13G0193900 Rhododendron simsii HOM05D007650 ORTHO05D009695 1.3e-102 377.1 289 73.7
PGSC0003DMG400008313 Solanum tuberosum HOM05D007650 ORTHO05D009695 1.3e-102 377.1 295 72.5
Thecc.06G153200 Theobroma cacao HOM05D007650 ORTHO05D009695 1.7e-102 376.7 273 74.7
Gohir.A06G197300 Gossypium hirsutum HOM05D007650 ORTHO05D009695 2.3e-102 376.3 283 73.1
Lsat_1_v5_gn_4_30200 Lactuca sativa HOM05D007650 ORTHO05D009695 2.3e-102 376.3 319 69.6
Sopen02g019890 Solanum pennellii HOM05D007650 ORTHO05D009695 2.3e-102 376.3 315 69.2
TWI09G0653 Tripterygium wilfordii HOM05D007650 ORTHO05D009695 2.3e-102 376.3 271 74.5
CAN.G257.1 Capsicum annuum HOM05D007650 ORTHO05D009695 3.0e-102 375.9 267 76.8
Ca_18274_v3 Cicer arietinum L. HOM05D007650 ORTHO05D009695 3.0e-102 375.9 290 73.1
Oeu040111.1 Olea europaea HOM05D007650 ORTHO05D009695 3.0e-102 375.9 305 70.2
Psat7g090640 Pisum sativum HOM05D007650 ORTHO05D009695 3.9e-102 375.6 297 71.4
Peaxi162Scf00796g00117 Petunia axillaris HOM05D007650 ORTHO05D009695 5.1e-102 375.2 293 73.0
HanXRQChr17g0565021 Helianthus annuus HOM05D007650 ORTHO05D009695 6.6e-102 374.8 257 79.8
VMungo0251G1744 Vigna mungo HOM05D007650 ORTHO05D009695 1.1e-101 374.0 263 77.2
Phvul.002G194800 Phaseolus vulgaris HOM05D007650 ORTHO05D009695 1.9e-101 373.2 299 71.2
CsaV3_6G051610 Cucumis sativus L. HOM05D007650 ORTHO05D009695 2.5e-101 372.9 298 71.8
TPR.G4852 Trifolium pratense HOM05D007650 ORTHO05D009695 2.5e-101 372.9 262 77.9
Glyma.05G129100 Glycine max HOM05D007650 ORTHO05D009695 3.3e-101 372.5 303 71.0
Glyma.08G083700 Glycine max HOM05D007650 ORTHO05D009695 3.3e-101 372.5 306 69.9
arahy.Tifrunner.gnm1.ann1.IH3VZP Arachis hypogaea HOM05D007650 ORTHO05D009695 5.6e-101 371.7 262 77.1
Eucgr.D00307 Eucalyptus grandis HOM05D007650 ORTHO05D009695 9.6e-101 370.9 295 71.9
MELO3C007146.2 Cucumis melo HOM05D007650 ORTHO05D009695 1.6e-100 370.2 293 72.0
PGR083G1882 Punica granatum HOM05D007650 ORTHO05D009695 2.8e-100 369.4 310 69.4
unitig_21.g20640 Utricularia gibba HOM05D007650 ORTHO05D009695 6.2e-100 368.2 300 69.7
CDE02G4320 Ceratophyllum demersum HOM05D007650 ORTHO05D009695 8.1e-100 367.9 289 70.2
ECA234G0548 Erigeron canadensis HOM05D007650 ORTHO05D009695 1.4e-99 367.1 252 79.8
Nitab4.5_0001040g0130 Nicotiana tabacum HOM05D007650 ORTHO05D009695 3.1e-99 365.9 286 71.7
SalBow7G1373 Salvia bowleyana HOM05D007650 ORTHO05D009695 5.3e-99 365.2 306 66.7
Nitab4.5_0001655g0220 Nicotiana tabacum HOM05D007650 ORTHO05D009695 9.0e-99 364.4 265 76.6
Lalb_Chr07g0188691 Lupinus albus HOM05D007650 ORTHO05D009695 2.6e-98 362.8 303 70.0
AUR62030238 Chenopodium quinoa HOM05D007650 ORTHO05D009695 1.8e-94 350.1 307 66.8
Zm00001eb296000 Zea mays HOM05D007650 ORTHO05D009695 3.0e-94 349.4 253 73.5
Os05g0565400 Oryza sativa ssp. japonica HOM05D007650 ORTHO05D009695 2.1e-92 343.2 255 72.5
HPP92_024569 Vanilla planifolia HOM05D007650 ORTHO05D009695 1.8e-91 340.1 275 68.0
Aqoxy4G00120 Aquilegia oxysepala HOM05D007650 ORTHO05D009695 1.5e-90 337.0 306 64.1
ClCG01G024480 Citrullus lanatus HOM05D007650 ORTHO05D009695 1.9e-88 330.1 266 71.8
AagrBONN_evm.TU.Sc2ySwM_117.3317 Anthoceros agrestis HOM05D007650 ORTHO05D009695 3.3e-85 319.3 282 64.5
COL.COLO4_38298 Corchorus olitorius HOM05D007650 ORTHO05D009695 9.6e-85 317.8 273 64.8
SMO174G0197 Selaginella moellendorffii HOM05D007650 ORTHO05D009695 1.1e-83 314.3 271 63.1
AUR62027602 Chenopodium quinoa HOM05D007650 ORTHO05D009695 1.4e-80 303.9 308 60.1
Mapoly0064s0064 Marchantia polymorpha HOM05D007650 ORTHO05D009695 2.1e-79 300.1 249 65.5
Prupe.4G078000 Prunus persica HOM05D007650 ORTHO05D009695 5.9e-74 282.0 282 59.6
Sed0021228 Sechium edule HOM05D007650 ORTHO05D009695 1.1e-72 277.7 232 67.2
ATR0585G132 Amborella trichopoda HOM05D007650 ORTHO05D009695 1.5e-66 257.3 195 72.8
Pp3c2_34550 Physcomitrium patens HOM05D007650 ORTHO05D009695 1.5e-66 257.3 210 65.2
Solyc02g070800.2 Solanum lycopersicum HOM05D007650 ORTHO05D009695 4.8e-60 235.7 176 73.3
CBR_g31268 Chara braunii HOM05D007650 ORTHO05D009695 4.5e-58 229.2 253 53.8
TAR629G3449 Trochodendron aralioides HOM05D007650 ORTHO05D009695 5.2e-54 215.7 237 56.5
Actinidia19514 Actinidia chinensis HOM05D007650 ORTHO05D009695 1.3e-49 201.1 164 72.6
Ah.14g086550 Amaranthus hybridus HOM05D007650 ORTHO05D009695 1.7e-49 200.7 234 59.4
GSVIVG01021423001 Vitis vinifera HOM05D007650 ORTHO05D009695 5.0e-49 199.1 161 72.7
QL05p059017 Quercus lobata HOM05D007650 ORTHO05D009695 6.5e-49 198.7 208 62.5
Sopen02g019900 Solanum pennellii HOM05D007650 ORTHO05D009695 4.8e-36 156.0 129 69.8
HanXRQChr09g0241981 Helianthus annuus HOM05D007650 ORTHO05D009695 2.1e-31 140.6 96 75.0
Manes.15G119900 Manihot esculenta HOM05D007650 ORTHO05D009695 2.8e-28 130.2 162 52.5
CAN.G637.51 Capsicum annuum HOM05D007650 ORTHO05D009695 5.9e-26 122.5 119 59.7
CAN.G84.7 Capsicum annuum HOM05D007650 ORTHO05D009695 3.7e-20 103.2 134 50.0
TAR629G1582 Trochodendron aralioides HOM05D007650 ORTHO05D009695 2.0e-13 80.9 51 84.3
Zm00001eb089160 Zea mays HOM05D000666 ORTHO05D001431 2.1e-10 70.9 47 74.5


User provided reference genes

Program Settings