Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc17g0004190 Simmondsia chinensis HOM05D001929 ORTHO05D388522 1.4e-190 669.5 345 100.0
Sc06g0003300 Simmondsia chinensis HOM05D001929 ORTHO05D389773 6.9e-20 102.4 68 76.5
CsaV3_6G015970 Cucumis sativus L. HOM05D001929 ORTHO05D002426 1.4e-07 61.6 87 40.2
Gohir.D03G141600 Gossypium hirsutum HOM05D001929 ORTHO05D002426 1.4e-07 61.6 83 41.0
AUR62036249 Chenopodium quinoa HOM05D001929 ORTHO05D002426 1.8e-07 61.2 66 45.5
MELO3C026839.2 Cucumis melo HOM05D001929 ORTHO05D002426 1.8e-07 61.2 87 40.2
HanXRQChr04g0103721 Helianthus annuus HOM05D001929 ORTHO05D002426 2.3e-07 60.8 77 42.9
ClCG02G019350 Citrullus lanatus HOM05D001929 ORTHO05D002426 3.0e-07 60.5 87 40.2
Duzib168G0787 Durio zibethinus HOM05D001929 ORTHO05D002426 3.0e-07 60.5 83 39.8
Hma1.2p1_0841F.1_g226830 Hydrangea macrophylla HOM05D001929 ORTHO05D002426 3.0e-07 60.5 77 42.9
Ciclev10027704m.g Citrus clementina HOM05D001929 ORTHO05D002426 3.9e-07 60.1 77 41.6
TAR357G0002 Trochodendron aralioides HOM05D001929 ORTHO05D002426 3.9e-07 60.1 66 43.9
CiPaw.13G072700 Carya illinoinensis HOM05D001929 ORTHO05D002426 5.1e-07 59.7 77 40.3
Dinv28677 Davidia involucrata HOM05D001929 ORTHO05D002426 5.1e-07 59.7 77 41.6
TWI32G0735 Tripterygium wilfordii HOM05D001929 ORTHO05D002426 5.1e-07 59.7 77 41.6
Actinidia32623 Actinidia chinensis HOM05D001929 ORTHO05D002426 6.7e-07 59.3 66 40.9
AUR62009697 Chenopodium quinoa HOM05D001929 ORTHO05D002426 6.7e-07 59.3 66 43.9
Haze_24386 Corylus avellana HOM05D001929 ORTHO05D002426 6.7e-07 59.3 77 41.6
Duzib170G1054 Durio zibethinus HOM05D001929 ORTHO05D002426 6.7e-07 59.3 77 40.3
CSS0012882 Camellia sinensis var. sinensis HOM05D001929 ORTHO05D002426 8.8e-07 58.9 77 39.0
CSS0029834 Camellia sinensis var. sinensis HOM05D001929 ORTHO05D002426 8.8e-07 58.9 77 39.0
Cfa011745 Carpinus fangiana HOM05D001929 ORTHO05D002426 8.8e-07 58.9 77 41.6
COL.COLO4_11120 Corchorus olitorius HOM05D001929 ORTHO05D002426 8.8e-07 58.9 77 40.3
Gohir.A03G027000 Gossypium hirsutum HOM05D001929 ORTHO05D002426 8.8e-07 58.9 116 34.5
Gohir.A13G233900 Gossypium hirsutum HOM05D001929 ORTHO05D002426 8.8e-07 58.9 77 42.9
Gohir.D03G141500 Gossypium hirsutum HOM05D001929 ORTHO05D002426 8.8e-07 58.9 87 37.9
Gohir.D13G239400 Gossypium hirsutum HOM05D001929 ORTHO05D002426 8.8e-07 58.9 66 42.4
Gorai.003G148200 Gossypium raimondii HOM05D001929 ORTHO05D002426 8.8e-07 58.9 87 37.9
Gorai.003G148600 Gossypium raimondii HOM05D001929 ORTHO05D002426 8.8e-07 58.9 116 34.5
Gorai.013G270300 Gossypium raimondii HOM05D001929 ORTHO05D002426 8.8e-07 58.9 66 42.4
Thecc.09G354700 Theobroma cacao HOM05D001929 ORTHO05D002426 8.8e-07 58.9 77 41.6
TAR369G1009 Trochodendron aralioides HOM05D001929 ORTHO05D002426 8.8e-07 58.9 66 42.4
CSS0048766 Camellia sinensis var. sinensis HOM05D001929 ORTHO05D002426 1.1e-06 58.5 77 41.6
Sed0013729 Sechium edule HOM05D001929 ORTHO05D002426 1.1e-06 58.5 66 42.4
Ca_05634_v3 Cicer arietinum L. HOM05D001929 ORTHO05D002426 1.9e-06 57.8 77 39.0
COL.COLO4_11115 Corchorus olitorius HOM05D001929 ORTHO05D002426 1.9e-06 57.8 77 37.7
Gohir.A13G233800 Gossypium hirsutum HOM05D001929 ORTHO05D002426 1.9e-06 57.8 66 40.9
TAR633G2106 Trochodendron aralioides HOM05D001929 ORTHO05D002426 1.9e-06 57.8 66 40.9
Eucgr.B02226 Eucalyptus grandis HOM05D001929 ORTHO05D002426 2.5e-06 57.4 77 39.0
Medtr5g072480 Medicago truncatula HOM05D001929 ORTHO05D002426 2.5e-06 57.4 77 37.7
Oeu057630.1 Olea europaea HOM05D001929 ORTHO05D002426 2.5e-06 57.4 67 38.8
Sed0021179 Sechium edule HOM05D001929 ORTHO05D002426 2.5e-06 57.4 87 39.1
COL.COLO4_11119 Corchorus olitorius HOM05D001929 ORTHO05D002426 3.3e-06 57.0 87 36.8
FvH4_6g10930 Fragaria vesca HOM05D001929 ORTHO05D002426 3.3e-06 57.0 87 36.8
FAN02G0352 Fragaria x ananassa HOM05D001929 ORTHO05D002426 3.3e-06 57.0 66 40.9
FAN05G2866 Fragaria x ananassa HOM05D001929 ORTHO05D002426 3.3e-06 57.0 66 40.9
FAN05G4907 Fragaria x ananassa HOM05D001929 ORTHO05D002426 3.3e-06 57.0 87 36.8
FAN14G3016 Fragaria x ananassa HOM05D001929 ORTHO05D002426 3.3e-06 57.0 87 36.8
Manes.02G214500 Manihot esculenta HOM05D001929 ORTHO05D002426 3.3e-06 57.0 77 39.0
Prupe.6G282900 Prunus persica HOM05D001929 ORTHO05D002426 3.3e-06 57.0 87 35.6
TPR.G34744 Trifolium pratense HOM05D001929 ORTHO05D002426 3.3e-06 57.0 77 39.0
TWI79G0789 Tripterygium wilfordii HOM05D001929 ORTHO05D002426 3.3e-06 57.0 88 36.4
EL10Ac7g15890 Beta vulgaris HOM05D001929 ORTHO05D002426 4.3e-06 56.6 61 45.9
CSS0000842 Camellia sinensis var. sinensis HOM05D001929 ORTHO05D002426 4.3e-06 56.6 83 34.9
CSS0016426 Camellia sinensis var. sinensis HOM05D001929 ORTHO05D002426 4.3e-06 56.6 83 34.9
Dinv12142 Davidia involucrata HOM05D001929 ORTHO05D002426 4.3e-06 56.6 66 39.4
Gohir.A03G027200 Gossypium hirsutum HOM05D001929 ORTHO05D002426 4.3e-06 56.6 87 36.8
RcHm_v2.0_Chr3g0462201 Rosa chinensis HOM05D001929 ORTHO05D002426 4.3e-06 56.6 66 40.9
Thecc.09G354600 Theobroma cacao HOM05D001929 ORTHO05D002426 4.3e-06 56.6 63 41.3
GSVIVG01030304001 Vitis vinifera HOM05D001929 ORTHO05D002426 4.3e-06 56.6 66 39.4
MSTRG.5554 Avicennia marina HOM05D001929 ORTHO05D002426 5.7e-06 56.2 67 35.8
DCAR_007353 Daucus carota HOM05D001929 ORTHO05D002426 5.7e-06 56.2 77 39.0
FAN09G1757 Fragaria x ananassa HOM05D001929 ORTHO05D002426 5.7e-06 56.2 66 40.9
Glyma.02G229700 Glycine max HOM05D001929 ORTHO05D002426 5.7e-06 56.2 77 37.7
HanXRQChr08g0229051 Helianthus annuus HOM05D001929 ORTHO05D002426 5.7e-06 56.2 77 41.6
Psat2g055360 Pisum sativum HOM05D001929 ORTHO05D002426 5.7e-06 56.2 77 37.7
Potri.009G075700 Populus trichocarpa HOM05D001929 ORTHO05D002426 5.7e-06 56.2 77 37.7
Sabra09G0057700 Salix brachista HOM05D001929 ORTHO05D002426 5.7e-06 56.2 77 40.3
TWI31G1274 Tripterygium wilfordii HOM05D001929 ORTHO05D002426 5.7e-06 56.2 77 39.0
Actinidia23215 Actinidia chinensis HOM05D001929 ORTHO05D002426 7.4e-06 55.8 66 39.4
Actinidia29079 Actinidia chinensis HOM05D001929 ORTHO05D002426 7.4e-06 55.8 77 35.1
CiPaw.09G213300 Carya illinoinensis HOM05D001929 ORTHO05D002426 7.4e-06 55.8 66 39.4
Haze_21058 Corylus avellana HOM05D001929 ORTHO05D002426 7.4e-06 55.8 66 40.9
Thhalv10012525m.g Eutrema salsugineum HOM05D001929 ORTHO05D002426 7.4e-06 55.8 66 39.4
Glyma.14G196800 Glycine max HOM05D001929 ORTHO05D002426 7.4e-06 55.8 77 37.7
Rhsim05G0223400 Rhododendron simsii HOM05D001929 ORTHO05D002426 7.4e-06 55.8 66 39.4
FAN16G0674 Fragaria x ananassa HOM05D001929 ORTHO05D002426 9.7e-06 55.5 66 40.9
FAN25G0352 Fragaria x ananassa HOM05D001929 ORTHO05D002426 9.7e-06 55.5 66 40.9
MD12G1177300 Malus domestica HOM05D001929 ORTHO05D002426 9.7e-06 55.5 87 35.6
Oeu017147.1 Olea europaea HOM05D001929 ORTHO05D002426 9.7e-06 55.5 77 39.0
PSO017G2329 Papaver somniferum HOM05D001929 ORTHO05D002426 9.7e-06 55.5 164 31.1
Prupe.6G051900 Prunus persica HOM05D001929 ORTHO05D002426 9.7e-06 55.5 65 40.0


User provided reference genes

Program Settings