Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc17g0003550 Simmondsia chinensis HOM05D007479 ORTHO05D009416 8.2e-94 347.1 175 100.0
CANSAT25G0138 Cannabis sativa HOM05D007479 ORTHO05D009416 5.0e-43 178.3 109 78.0
GSVIVG01011009001 Vitis vinifera HOM05D007479 ORTHO05D009416 7.2e-42 174.5 163 62.0
QL12p023941 Quercus lobata HOM05D007479 ORTHO05D009416 9.5e-42 174.1 181 56.9
CSS0010600 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 1.6e-41 173.3 117 72.6
CSS0014944 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 1.6e-41 173.3 117 72.6
FvH4_2g24710 Fragaria vesca HOM05D007479 ORTHO05D009416 2.1e-41 172.9 125 70.4
FAN20G0962 Fragaria x ananassa HOM05D007479 ORTHO05D009416 2.1e-41 172.9 125 70.4
FAN24G3263 Fragaria x ananassa HOM05D000112 ORTHO05D000564 2.1e-41 172.9 125 70.4
TWI59G0977 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 2.8e-41 172.6 121 71.9
TWI59G1446 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 2.8e-41 172.6 121 71.9
Hund18029 Selenicereus undatus HOM05D007479 ORTHO05D009416 3.6e-41 172.2 174 57.5
AUR62036657 Chenopodium quinoa HOM05D007479 ORTHO05D009416 1.0e-40 170.6 112 72.3
FAN27G0664 Fragaria x ananassa HOM05D007479 ORTHO05D009416 1.8e-40 169.9 125 68.8
COL.COLO4_08032 Corchorus olitorius HOM05D007479 ORTHO05D009416 2.3e-40 169.5 166 60.2
Cfa006037 Carpinus fangiana HOM05D007479 ORTHO05D009416 3.0e-40 169.1 175 54.3
HanXRQChr11g0350171 Helianthus annuus HOM05D007479 ORTHO05D009416 5.2e-40 168.3 110 72.7
MD00G1056400 Malus domestica HOM05D007479 ORTHO05D009416 5.2e-40 168.3 123 67.5
Nitab4.5_0002093g0220 Nicotiana tabacum HOM05D007479 ORTHO05D009416 8.9e-40 167.5 107 76.6
Nitab4.5_0004150g0020 Nicotiana tabacum HOM05D007479 ORTHO05D009416 1.2e-39 167.2 107 76.6
EL10Ac7g17366 Beta vulgaris HOM05D007479 ORTHO05D009416 1.5e-39 166.8 171 56.1
CiPaw.07G099900 Carya illinoinensis HOM05D007479 ORTHO05D009416 1.5e-39 166.8 110 73.6
Ca_09112_v3 Cicer arietinum L. HOM05D000335 ORTHO05D001251 1.5e-39 166.8 109 73.4
Peaxi162Scf01039g00126 Petunia axillaris HOM05D007479 ORTHO05D009416 1.5e-39 166.8 151 58.3
DCAR_002787 Daucus carota HOM05D007479 ORTHO05D009416 2.0e-39 166.4 110 72.7
Lj1g0024237 Lotus japonicus HOM05D007479 ORTHO05D009416 2.0e-39 166.4 157 57.3
Gorai.004G085300 Gossypium raimondii HOM05D007479 ORTHO05D009416 2.6e-39 166.0 157 59.2
Manes.01G213600 Manihot esculenta HOM05D007479 ORTHO05D009416 2.6e-39 166.0 123 66.7
PGR044G0517 Punica granatum HOM05D007479 ORTHO05D009416 2.6e-39 166.0 122 67.2
RcHm_v2.0_Chr6g0292541 Rosa chinensis HOM05D007479 ORTHO05D009416 3.4e-39 165.6 152 57.9
Aqoxy2G03133 Aquilegia oxysepala HOM05D007479 ORTHO05D009416 4.4e-39 165.2 149 57.7
Cpa.g.sc9.160 Carica papaya HOM05D007479 ORTHO05D009416 4.4e-39 165.2 110 72.7
Ciclev10022531m.g Citrus clementina HOM05D007479 ORTHO05D009416 4.4e-39 165.2 148 60.8
MELO3C015894.2 Cucumis melo HOM05D007479 ORTHO05D009416 4.4e-39 165.2 134 64.2
Duzib133G1271 Durio zibethinus HOM05D007479 ORTHO05D009416 4.4e-39 165.2 122 66.4
Glyma.19G206000 Glycine max HOM05D007479 ORTHO05D009416 7.5e-39 164.5 117 67.5
Gohir.D08G080200 Gossypium hirsutum HOM05D007479 ORTHO05D009416 7.5e-39 164.5 157 58.6
Phvul.001G201900 Phaseolus vulgaris HOM05D007479 ORTHO05D009416 7.5e-39 164.5 116 69.0
VMungo1383G0484 Vigna mungo HOM05D007479 ORTHO05D009416 7.5e-39 164.5 116 69.0
Lsat_1_v5_gn_8_55221 Lactuca sativa HOM05D007479 ORTHO05D009416 1.3e-38 163.7 136 62.5
Rhsim13G0017200 Rhododendron simsii HOM05D007479 ORTHO05D009416 1.7e-38 163.3 128 65.6
Oeu047908.1 Olea europaea HOM05D007479 ORTHO05D009416 2.2e-38 162.9 143 60.8
CsaV3_7G028280 Cucumis sativus L. HOM05D007479 ORTHO05D009416 2.9e-38 162.5 109 74.3
Prupe.8G252200 Prunus persica HOM05D007479 ORTHO05D009416 2.9e-38 162.5 106 74.5
Sed0025615 Sechium edule HOM05D007479 ORTHO05D009416 3.7e-38 162.2 132 63.6
CSS0048836 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 4.9e-38 161.8 131 64.1
ClCG09G006510 Citrullus lanatus HOM05D007479 ORTHO05D009416 4.9e-38 161.8 109 73.4
MSTRG.12593 Avicennia marina HOM05D007479 ORTHO05D009416 8.3e-38 161.0 138 60.9
ECA236G2582 Erigeron canadensis HOM05D007479 ORTHO05D009416 8.3e-38 161.0 132 62.9
Gohir.A08G072000 Gossypium hirsutum HOM05D007479 ORTHO05D009416 8.3e-38 161.0 124 66.1
Sopen06g035860 Solanum pennellii HOM05D007479 ORTHO05D009416 8.3e-38 161.0 108 70.4
TAR362G0341 Trochodendron aralioides HOM05D007479 ORTHO05D009416 8.3e-38 161.0 122 66.4
Actinidia00698 Actinidia chinensis HOM05D007479 ORTHO05D009416 1.1e-37 160.6 121 66.9
Hma1.2p1_0209F.1_g089100 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 1.1e-37 160.6 105 74.3
Thecc.01G290200 Theobroma cacao HOM05D007479 ORTHO05D009416 1.1e-37 160.6 121 67.8
Atru.chr5.1282 Acer truncatum HOM05D007479 ORTHO05D009416 1.4e-37 160.2 171 55.6
CARHR251580 Cardamine hirsuta HOM05D007479 ORTHO05D009416 1.8e-37 159.8 171 51.5
Solyc06g084470.4 Solanum lycopersicum HOM05D007479 ORTHO05D009416 1.8e-37 159.8 108 69.4
PGSC0003DMG400024042 Solanum tuberosum HOM05D007479 ORTHO05D009416 1.8e-37 159.8 107 70.1
arahy.Tifrunner.gnm1.ann1.5G1G6M Arachis hypogaea HOM05D007479 ORTHO05D009416 2.4e-37 159.5 149 55.7
MBI19_g32765_MAGBIO Magnolia biondii HOM05D007479 ORTHO05D009416 5.4e-37 158.3 171 51.5
AL6G49780 Arabidopsis lyrata HOM05D007479 ORTHO05D009416 7.0e-37 157.9 122 63.9
AT4G03150 Arabidopsis thaliana HOM05D007479 ORTHO05D009416 7.0e-37 157.9 122 63.1
C09p02570 Brassica napus HOM05D007479 ORTHO05D009416 7.0e-37 157.9 108 66.7
Cc01_g20220 Coffea canephora HOM05D007479 ORTHO05D009416 1.2e-36 157.1 140 57.1
HPP92_010636 Vanilla planifolia HOM05D007479 ORTHO05D009416 1.2e-36 157.1 112 67.9
Thhalv10029006m.g Eutrema salsugineum HOM05D007479 ORTHO05D009416 1.6e-36 156.8 165 52.1
THA.LOC104826012 Tarenaya hassleriana HOM05D007479 ORTHO05D009416 2.7e-36 156.0 145 57.9
Sabra14G0101000 Salix brachista HOM05D007479 ORTHO05D009416 3.5e-36 155.6 165 53.3
BcaB01g01976 Brassica carinata HOM05D007479 ORTHO05D009416 4.6e-36 155.2 109 66.1
Lalb_Chr18g0047491 Lupinus albus HOM05D007479 ORTHO05D009416 4.6e-36 155.2 117 65.8
SGA_v2.0_scaffold172G39060 Striga asiatica HOM05D007479 ORTHO05D009416 5.9e-36 154.8 154 54.5
Carub.0006s3390 Capsella rubella HOM05D007479 ORTHO05D009416 7.8e-36 154.5 123 61.8
Migut.N01396 Erythranthe guttata HOM05D007479 ORTHO05D009416 7.8e-36 154.5 138 57.2
BolC9t53187H Brassica oleracea HOM05D007479 ORTHO05D009416 1.0e-35 154.1 108 66.7
TPR.G32316 Trifolium pratense HOM05D007479 ORTHO05D009416 1.0e-35 154.1 103 73.8
A09p02470 Brassica napus HOM05D007479 ORTHO05D009416 1.3e-35 153.7 108 65.7
BraA09t35894Z Brassica rapa HOM05D007479 ORTHO05D009416 1.3e-35 153.7 108 65.7
Eucgr.K03432 Eucalyptus grandis HOM05D007479 ORTHO05D009416 1.3e-35 153.7 161 52.2
Sp6g03190 Schrenkiella parvula HOM05D007479 ORTHO05D009416 3.9e-35 152.1 109 66.1
Haze_04810 Corylus avellana HOM05D007479 ORTHO05D009416 6.6e-35 151.4 179 50.3
SalBow6G0786 Salvia bowleyana HOM05D007479 ORTHO05D009416 8.6e-35 151.0 145 57.2
Medtr7g107680 Medicago truncatula HOM05D007479 ORTHO05D009416 1.5e-34 150.2 110 65.5
Nn3g21272 Nelumbo nucifera HOM05D007479 ORTHO05D009416 1.9e-34 149.8 111 66.7
Psat3g024840 Pisum sativum HOM05D007479 ORTHO05D009416 1.9e-34 149.8 102 71.6
Potri.014G135400 Populus trichocarpa HOM05D007479 ORTHO05D009416 7.3e-34 147.9 105 71.4
CDE09G0484 Ceratophyllum demersum HOM05D007479 ORTHO05D009416 3.6e-33 145.6 109 64.2
PSO210G3923 Papaver somniferum HOM05D007479 ORTHO05D009416 4.7e-33 145.2 119 61.3
Os12g0534100 Oryza sativa ssp. japonica HOM05D007479 ORTHO05D009416 1.4e-32 143.7 105 65.7
unitig_21.g20281 Utricularia gibba HOM05D007479 ORTHO05D009416 1.8e-32 143.3 115 61.7
AUR62034613 Chenopodium quinoa HOM05D007479 ORTHO05D009416 3.1e-32 142.5 91 74.7
ATR0706G261 Amborella trichopoda HOM05D001702 ORTHO05D001791 4.0e-32 142.1 101 63.4
PSO572G0003 Papaver somniferum HOM05D007479 ORTHO05D009416 5.2e-32 141.7 150 53.3
PSO832G0938 Papaver somniferum HOM05D007479 ORTHO05D009416 5.2e-32 141.7 150 53.3
PSO832G2794 Papaver somniferum HOM05D007479 ORTHO05D009416 5.2e-32 141.7 150 53.3
Hma1.2p1_0209F.1_g089110 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 1.3e-30 137.1 87 75.9
Lj2P1185T15 Lonicera japonica HOM05D007479 ORTHO05D009416 1.3e-30 137.1 87 75.9
Mapoly0029s0155 Marchantia polymorpha HOM05D007479 ORTHO05D009416 1.2e-28 130.6 135 51.9
Mapoly0275s0001 Marchantia polymorpha HOM05D007479 ORTHO05D009416 1.2e-28 130.6 135 51.9
Pp3c5_13320 Physcomitrium patens HOM05D007479 ORTHO05D009416 2.0e-28 129.8 108 55.6
vmacro02508 Vaccinium macrocarpon HOM05D007479 ORTHO05D009416 2.7e-28 129.4 112 60.7
AagrBONN_evm.TU.Sc2ySwM_368.764 Anthoceros agrestis HOM05D007479 ORTHO05D009416 3.0e-27 125.9 109 53.2
SalBow8G4180 Salvia bowleyana HOM05D007479 ORTHO05D009416 1.9e-26 123.2 85 69.4
CBR_g22325 Chara braunii HOM05D007479 ORTHO05D009416 5.6e-26 121.7 142 49.3
Dinv32992 Davidia involucrata HOM05D007479 ORTHO05D009416 1.7e-11 73.6 48 70.8


User provided reference genes

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