Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc17g0003440 Simmondsia chinensis HOM05D002567 ORTHO05D006538 0.0e+00 1903.3 1017 100.0
EL10Ac7g17517 Beta vulgaris HOM05D002567 ORTHO05D006538 9.2e-222 774.6 1029 51.3
CiPaw.07G103600 Carya illinoinensis HOM05D002567 ORTHO05D006538 8.6e-220 768.1 1072 48.2
AUR62033197 Chenopodium quinoa HOM05D002567 ORTHO05D006538 4.7e-218 762.3 1021 50.3
QL12p030584 Quercus lobata HOM05D002567 ORTHO05D006538 4.3e-211 739.2 1084 46.3
Thecc.01G293900 Theobroma cacao HOM05D002567 ORTHO05D006538 8.9e-209 731.5 1097 44.9
Prupe.8G255600 Prunus persica HOM05D002567 ORTHO05D006538 2.2e-207 726.9 1036 47.0
Duzib138G0932 Durio zibethinus HOM05D002567 ORTHO05D006538 3.5e-205 719.5 1091 45.0
Gorai.004G088100 Gossypium raimondii HOM05D002567 ORTHO05D006538 6.0e-205 718.8 1087 45.0
Gohir.D08G083700 Gossypium hirsutum HOM05D002567 ORTHO05D006538 6.6e-204 715.3 1075 45.2
Gohir.A08G074400 Gossypium hirsutum HOM05D002567 ORTHO05D006538 2.5e-203 713.4 1090 45.3
Dinv33021 Davidia involucrata HOM05D002567 ORTHO05D006538 3.6e-202 709.5 1065 46.2
AUR62043270 Chenopodium quinoa HOM05D002567 ORTHO05D006538 2.4e-201 706.8 1036 47.4
COL.COLO4_07998 Corchorus olitorius HOM05D002567 ORTHO05D006538 5.3e-201 705.7 996 45.4
MD11G1302000 Malus domestica HOM05D002567 ORTHO05D006538 1.9e-198 697.2 1069 45.7
Haze_04858 Corylus avellana HOM05D002567 ORTHO05D006538 2.1e-197 693.7 903 48.6
GSVIVG01010967001 Vitis vinifera HOM05D002567 ORTHO05D006538 1.3e-196 691.0 791 52.6
Hund18109 Selenicereus undatus HOM05D002567 ORTHO05D006538 1.1e-195 688.0 1043 46.9
FvH4_2g25100 Fragaria vesca HOM05D002567 ORTHO05D006538 2.5e-195 686.8 991 45.9
CANSAT25G2282 Cannabis sativa HOM05D002567 ORTHO05D006538 9.6e-195 684.9 709 54.9
MD03G1284300 Malus domestica HOM05D002567 ORTHO05D006538 1.1e-193 681.4 1040 45.0
TWI14G0289 Tripterygium wilfordii HOM05D002567 ORTHO05D006538 1.2e-192 677.9 1071 42.8
RcHm_v2.0_Chr6g0293161 Rosa chinensis HOM05D002567 ORTHO05D006538 2.9e-191 673.3 1070 43.7
Lalb_Chr15g0078671 Lupinus albus HOM05D002567 ORTHO05D006538 3.2e-190 669.8 751 52.9
Potri.002G209216 Populus trichocarpa HOM05D002567 ORTHO05D006538 1.6e-189 667.5 881 48.7
Glyma.03G211500 Glycine max HOM05D002567 ORTHO05D006538 2.7e-189 666.8 750 52.9
MELO3C016045.2 Cucumis melo HOM05D002567 ORTHO05D006538 4.6e-189 666.0 820 50.4
Atru.chr5.1232 Acer truncatum HOM05D002567 ORTHO05D006538 1.0e-188 664.8 1087 43.3
CsaV3_7G028930 Cucumis sativus L. HOM05D002567 ORTHO05D006538 1.9e-187 660.6 820 50.1
Lj1g0027200 Lotus japonicus HOM05D002567 ORTHO05D006538 2.5e-187 660.2 749 52.9
Nn3g21405 Nelumbo nucifera HOM05D002567 ORTHO05D006538 9.6e-187 658.3 915 46.7
Cpa.g.sc9.189 Carica papaya HOM05D002567 ORTHO05D006538 1.6e-186 657.5 1104 42.5
FAN24G0094 Fragaria x ananassa HOM05D002567 ORTHO05D006538 2.1e-186 657.1 986 44.7
Dinv19733 Davidia involucrata HOM05D002567 ORTHO05D006538 6.2e-186 655.6 625 58.7
TAR362G0158 Trochodendron aralioides HOM05D002567 ORTHO05D006538 2.4e-185 653.7 740 53.4
VMungo1383G1965 Vigna mungo HOM05D002567 ORTHO05D006538 4.0e-185 652.9 754 52.5
Glyma.19G208700 Glycine max HOM05D002567 ORTHO05D006538 9.0e-185 651.7 1074 42.2
Sabra02G0150900 Salix brachista HOM05D002567 ORTHO05D006538 4.9e-183 646.0 887 46.9
Phvul.001G204600 Phaseolus vulgaris HOM05D002567 ORTHO05D006538 6.5e-183 645.6 747 52.1
TWI59G0117 Tripterygium wilfordii HOM05D002567 ORTHO05D006538 1.4e-182 644.4 1073 42.9
Ca_09134_v3 Cicer arietinum L. HOM05D002567 ORTHO05D006538 5.5e-182 642.5 780 50.9
Sed0021907 Sechium edule HOM05D002567 ORTHO05D006538 9.3e-182 641.7 859 47.0
Potri.014G132800 Populus trichocarpa HOM05D002567 ORTHO05D006538 2.3e-180 637.1 1175 41.0
Cc01_g20510 Coffea canephora HOM05D002567 ORTHO05D006538 8.7e-180 635.2 786 49.5
ClCG09G006200 Citrullus lanatus HOM05D002567 ORTHO05D006538 3.3e-179 633.3 1153 40.4
PGR119G0460 Punica granatum HOM05D002567 ORTHO05D006538 4.3e-179 632.9 740 51.5
Ciclev10018617m.g Citrus clementina HOM05D002567 ORTHO05D006538 1.1e-177 628.2 1142 40.3
Nn5g30059 Nelumbo nucifera HOM05D002567 ORTHO05D006538 4.0e-177 626.3 920 45.4
TPR.G9283 Trifolium pratense HOM05D002567 ORTHO05D006538 5.3e-177 625.9 767 50.8
CAN.G1562.7 Capsicum annuum HOM05D002567 ORTHO05D006538 1.0e-175 621.7 725 50.3
Medtr7g108390 Medicago truncatula HOM05D002567 ORTHO05D006538 1.0e-175 621.7 1075 41.2
HanXRQChr04g0118111 Helianthus annuus HOM05D002567 ORTHO05D006538 5.0e-175 619.4 773 48.1
MBI19_g12821_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 4.2e-174 616.3 738 49.3
THA.LOC104815934 Tarenaya hassleriana HOM05D002567 ORTHO05D006538 2.1e-173 614.0 1058 40.9
Lsat_1_v5_gn_8_54500 Lactuca sativa HOM05D002567 ORTHO05D006538 6.1e-173 612.5 757 49.9
Nitab4.5_0001697g0140 Nicotiana tabacum HOM05D002567 ORTHO05D006538 4.3e-171 606.3 976 43.3
FAN20G1419 Fragaria x ananassa HOM05D002567 ORTHO05D006538 7.4e-171 605.5 1143 40.6
arahy.Tifrunner.gnm1.ann1.B3NEVG Arachis hypogaea HOM05D002567 ORTHO05D006538 8.5e-167 592.0 744 50.0
Sopen09g029570 Solanum pennellii HOM05D002567 ORTHO05D006538 3.2e-166 590.1 1048 41.7
Aqoxy5G00702 Aquilegia oxysepala HOM05D002567 ORTHO05D006538 2.7e-165 587.0 823 45.2
Carub.0006s3458 Capsella rubella HOM05D002567 ORTHO05D006538 6.1e-165 585.9 988 40.8
ECA236G0908 Erigeron canadensis HOM05D002567 ORTHO05D006538 1.0e-164 585.1 830 45.4
FAN27G3038 Fragaria x ananassa HOM05D002567 ORTHO05D006538 1.0e-164 585.1 1120 40.2
DCAR_018344 Daucus carota HOM05D002567 ORTHO05D006538 1.4e-164 584.7 1031 42.0
FAN15G0803 Fragaria x ananassa HOM05D002567 ORTHO05D006538 2.5e-163 580.5 1147 39.2
CARHR250850 Cardamine hirsuta HOM05D002567 ORTHO05D006538 2.2e-162 577.4 819 45.5
AT4G02560 Arabidopsis thaliana HOM05D002567 ORTHO05D006538 3.4e-160 570.1 1024 39.4
vmacro02487 Vaccinium macrocarpon HOM05D002567 ORTHO05D006538 3.8e-159 566.6 821 44.5
Oeu046708.2 Olea europaea HOM05D002567 ORTHO05D006538 6.5e-159 565.8 1039 39.7
BcaB05g23644 Brassica carinata HOM05D002567 ORTHO05D006538 1.9e-158 564.3 1080 38.9
AL6G50490 Arabidopsis lyrata HOM05D002567 ORTHO05D006538 4.2e-158 563.1 1001 39.9
Sopen09g029590 Solanum pennellii HOM05D002567 ORTHO05D006538 4.2e-158 563.1 724 47.5
PSO210G0804 Papaver somniferum HOM05D002567 ORTHO05D006538 4.8e-154 549.7 906 40.5
BcaC03g16147 Brassica carinata HOM05D002567 ORTHO05D006538 6.3e-154 549.3 1020 39.5
PSO832G4557 Papaver somniferum HOM05D002567 ORTHO05D006538 1.1e-153 548.5 906 40.4
C02p39290 Brassica napus HOM05D002567 ORTHO05D006538 1.8e-153 547.7 1033 39.2
BolC2t09940H Brassica oleracea HOM05D002567 ORTHO05D006538 1.8e-153 547.7 1033 39.2
A02p24870 Brassica napus HOM05D002567 ORTHO05D006538 1.5e-152 544.7 1089 38.2
BraA02t07474Z Brassica rapa HOM05D002567 ORTHO05D006538 1.5e-152 544.7 1089 38.2
Sp6g02470 Schrenkiella parvula HOM05D002567 ORTHO05D006538 1.5e-152 544.7 921 41.0
arahy.Tifrunner.gnm1.ann1.VDB3CB Arachis hypogaea HOM05D001550 ORTHO05D001611 2.0e-152 544.3 768 46.5
Thhalv10028403m.g Eutrema salsugineum HOM05D002567 ORTHO05D006538 3.8e-151 540.0 982 39.5
Rhsim13G0015100 Rhododendron simsii HOM05D002567 ORTHO05D006538 6.1e-149 532.7 1142 36.9
HPP92_025217 Vanilla planifolia HOM05D002567 ORTHO05D006538 1.4e-148 531.6 762 44.1
Aa31LG5G2190 Aethionema arabicum HOM05D002567 ORTHO05D006538 2.0e-147 527.7 873 41.8
Solyc09g074730.3 Solanum lycopersicum HOM05D002567 ORTHO05D006538 1.4e-145 521.5 677 47.4
Psat3g022840 Pisum sativum HOM05D002567 ORTHO05D006538 3.1e-145 520.4 650 50.3
Migut.D00183 Erythranthe guttata HOM05D002567 ORTHO05D006538 9.1e-145 518.8 1021 37.9
CDE11G0231 Ceratophyllum demersum HOM05D002567 ORTHO05D006538 3.5e-144 516.9 875 40.9
Lj2C1188T12 Lonicera japonica HOM05D002567 ORTHO05D006538 1.7e-143 514.6 523 55.6
ATR0706G272 Amborella trichopoda HOM05D002567 ORTHO05D006538 1.1e-142 511.9 773 44.6
Lalb_Chr18g0047271 Lupinus albus HOM05D002567 ORTHO05D006538 1.5e-142 511.5 535 54.8
Nitab4.5_0001447g0040 Nicotiana tabacum HOM05D002567 ORTHO05D007435 2.5e-134 484.2 1040 37.5
arahy.Tifrunner.gnm1.ann1.8D3299 Arachis hypogaea HOM05D002567 ORTHO05D006538 5.5e-134 483.0 671 46.9
CDE05G3083 Ceratophyllum demersum HOM05D002567 ORTHO05D006538 3.0e-132 477.2 763 41.8
Zm00001eb142180 Zea mays HOM05D002567 ORTHO05D006538 2.7e-128 464.2 749 41.1
TAR633G1653 Trochodendron aralioides HOM05D002567 ORTHO05D006538 5.9e-128 463.0 379 65.4
Sabra14G0099200 Salix brachista HOM05D002567 ORTHO05D006538 1.4e-124 451.8 865 38.2
MBI19_g13122_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 1.7e-119 434.9 611 45.7
SGA_v2.0_scaffold2G01415 Striga asiatica HOM05D001550 ORTHO05D006538 8.0e-117 426.0 440 53.4
SHI15302 Sapria himalayana HOM05D002567 ORTHO05D006538 9.8e-115 419.1 827 38.0
Peaxi162Scf00067g01812 Petunia axillaris HOM05D002567 ORTHO05D006538 2.9e-114 417.5 420 55.0
Eucgr.H01191 Eucalyptus grandis HOM05D002567 ORTHO05D006538 2.8e-109 401.0 845 37.3
Solyc09g074690.3 Solanum lycopersicum HOM05D002567 ORTHO05D006538 2.8e-93 347.8 281 63.3
unitig_26.g10168 Utricularia gibba HOM05D002567 ORTHO05D006538 2.0e-91 341.7 1050 31.8
Actinidia28538 Actinidia chinensis HOM05D002567 ORTHO05D006538 9.3e-89 332.8 332 58.4
Os01g0934300 Oryza sativa ssp. japonica HOM05D002567 ORTHO05D006538 4.9e-74 283.9 332 48.8
Manes.05G065900 Manihot esculenta HOM05D002567 ORTHO05D006538 9.3e-73 279.6 471 43.3
Oeu011428.1 Olea europaea HOM05D002567 ORTHO05D006538 1.3e-63 249.2 205 60.5
Actinidia32249 Actinidia chinensis HOM05D002567 ORTHO05D006538 1.9e-57 228.8 384 41.1
Actinidia28539 Actinidia chinensis HOM05D002567 ORTHO05D006538 1.3e-53 216.1 376 42.0
Eucgr.H01192 Eucalyptus grandis HOM05D002567 ORTHO05D006538 1.9e-49 202.2 168 66.1
Mapoly0032s0010 Marchantia polymorpha HOM05D002567 ORTHO05D006538 4.5e-43 181.0 536 31.2
Actinidia02761 Actinidia chinensis HOM05D002567 ORTHO05D006538 1.5e-38 166.0 140 60.0
Lalb_Chr18g0047261 Lupinus albus HOM05D002567 ORTHO05D006538 1.3e-34 152.9 210 47.1
Pp3c7_5840 Physcomitrium patens HOM05D002567 ORTHO05D006538 1.5e-33 149.4 1004 23.5
Lj2A1188T56 Lonicera japonica HOM05D002567 ORTHO05D006538 7.2e-33 147.1 517 34.2
Peaxi162Scf00067g01813 Petunia axillaris HOM05D002567 ORTHO05D006538 1.2e-32 146.4 198 47.5
Solyc09g074710.2 Solanum lycopersicum HOM05D002567 ORTHO05D006538 6.7e-31 140.6 191 47.6
SMO119G0396 Selaginella moellendorffii HOM05D002567 ORTHO05D006538 2.5e-25 122.1 218 33.0
CBR_g48346 Chara braunii HOM05D002567 ORTHO05D006538 1.2e-22 113.2 292 30.5
Actinidia00673 Actinidia chinensis HOM05D002567 ORTHO05D006538 2.0e-22 112.5 128 50.8
MBI01_g23938_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 5.7e-22 110.9 79 64.6
Psat0s3384g0160 Pisum sativum HOM05D002567 ORTHO05D006538 7.5e-22 110.5 158 48.7
MBI05_g31851_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 1.8e-20 105.9 86 59.3
Actinidia02760 Actinidia chinensis HOM05D002567 ORTHO05D006538 3.5e-19 101.7 75 69.3
MBI02_g41934_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 1.4e-15 89.7 52 82.7
TAR399G0002 Trochodendron aralioides HOM05D002567 ORTHO05D006538 1.3e-13 83.2 66 57.6
BcaC04g23997 Brassica carinata HOM05D002567 ORTHO05D006538 2.2e-13 82.4 77 49.4
CBR_g48344 Chara braunii HOM05D002567 ORTHO05D006538 1.0e-10 73.6 166 33.1
Mapoly0055s0074 Marchantia polymorpha HOM05D002567 ORTHO05D006538 2.5e-09 68.9 94 38.3
Actinidia32248 Actinidia chinensis HOM05D002567 ORTHO05D006538 3.3e-09 68.6 50 74.0
Mapoly0004s0277 Marchantia polymorpha HOM05D002567 ORTHO05D006538 7.3e-09 67.4 254 28.3
Mapoly0030s0133 Marchantia polymorpha HOM05D002567 ORTHO05D006538 3.6e-08 65.1 254 29.1
Actinidia02762 Actinidia chinensis HOM05D002567 ORTHO05D006538 1.8e-07 62.8 113 44.2
Nn5g29271 Nelumbo nucifera HOM05D002848 ORTHO05D003043 6.8e-07 60.8 220 31.4
RcHm_v2.0_Chr2g0170231 Rosa chinensis HOM05D002567 ORTHO05D006538 6.8e-07 60.8 51 56.9


User provided reference genes

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