Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc17g0003020 Simmondsia chinensis HOM05D004451 ORTHO05D005177 3.4e-147 525.0 276 100.0
Actinidia17478 Actinidia chinensis HOM05D004451 ORTHO05D005177 1.1e-81 307.4 287 65.5
Eucgr.E02954 Eucalyptus grandis HOM05D004451 ORTHO05D005177 3.3e-81 305.8 268 67.5
CSS0044080 Camellia sinensis var. sinensis HOM05D004451 ORTHO05D005177 9.6e-81 304.3 284 65.8
Actinidia00412 Actinidia chinensis HOM05D004451 ORTHO05D005177 2.8e-80 302.8 265 66.8
Rhsim05G0088400 Rhododendron simsii HOM05D004451 ORTHO05D005177 8.1e-80 301.2 278 63.3
Prupe.8G134600 Prunus persica HOM05D004451 ORTHO05D005177 1.1e-79 300.8 274 63.9
AUR62039084 Chenopodium quinoa HOM05D004451 ORTHO05D005177 1.8e-79 300.1 267 64.8
Oeu010397.1 Olea europaea HOM05D004451 ORTHO05D005177 2.4e-79 299.7 274 65.7
Thecc.02G107400 Theobroma cacao HOM05D004451 ORTHO05D005177 4.0e-79 298.9 277 64.6
PGR142G3187 Punica granatum HOM05D004451 ORTHO05D005177 5.2e-79 298.5 280 66.1
Cc02_g19230 Coffea canephora HOM05D004451 ORTHO05D005177 6.9e-79 298.1 275 66.2
CSS0017890 Camellia sinensis var. sinensis HOM05D004451 ORTHO05D005177 9.0e-79 297.7 288 63.9
Potri.001G300500 Populus trichocarpa HOM05D004451 ORTHO05D005177 2.0e-78 296.6 282 63.5
EL10Ac9g22281 Beta vulgaris HOM05D004451 ORTHO05D005177 3.4e-78 295.8 271 64.6
CSS0019678 Camellia sinensis var. sinensis HOM05D004451 ORTHO05D005177 3.4e-78 295.8 287 62.7
Oeu018597.1 Olea europaea HOM05D004451 ORTHO05D005177 5.8e-78 295.0 276 65.6
vmacro19448 Vaccinium macrocarpon HOM05D004451 ORTHO05D005177 5.8e-78 295.0 285 64.2
HanXRQChr16g0514851 Helianthus annuus HOM05D004451 ORTHO05D005177 7.6e-78 294.7 270 63.7
Hund00148 Selenicereus undatus HOM05D004451 ORTHO05D005177 1.3e-77 293.9 286 61.9
Atru.chr5.2587 Acer truncatum HOM05D004451 ORTHO05D005177 2.2e-77 293.1 274 62.8
arahy.Tifrunner.gnm1.ann1.BMM90D Arachis hypogaea HOM05D004451 ORTHO05D005177 2.2e-77 293.1 278 63.3
Gohir.A13G043700 Gossypium hirsutum HOM05D004451 ORTHO05D005177 2.2e-77 293.1 281 64.4
Nn1g04705 Nelumbo nucifera HOM05D004451 ORTHO05D005177 2.2e-77 293.1 277 63.2
TAR381G0562 Trochodendron aralioides HOM05D004451 ORTHO05D005177 2.2e-77 293.1 267 64.8
CANSAT25G0591 Cannabis sativa HOM05D004451 ORTHO05D005177 2.9e-77 292.7 277 61.7
QL11p033916 Quercus lobata HOM05D004451 ORTHO05D005177 2.9e-77 292.7 277 62.8
AUR62010302 Chenopodium quinoa HOM05D004451 ORTHO05D005177 4.9e-77 292.0 276 63.0
Hma1.2p1_0796F.1_g219180 Hydrangea macrophylla HOM05D004451 ORTHO05D005177 4.9e-77 292.0 284 62.0
CANSAT25G2876 Cannabis sativa HOM05D004451 ORTHO05D005177 6.4e-77 291.6 277 61.4
Ciclev10029016m.g Citrus clementina HOM05D004451 ORTHO05D005177 8.4e-77 291.2 275 62.5
TWI79G0876 Tripterygium wilfordii HOM05D004451 ORTHO05D005177 8.4e-77 291.2 273 60.8
arahy.Tifrunner.gnm1.ann1.S5NBXN Arachis hypogaea HOM05D004451 ORTHO05D005177 1.1e-76 290.8 278 63.7
Gohir.D13G042200 Gossypium hirsutum HOM05D004451 ORTHO05D005177 1.4e-76 290.4 281 63.7
GSVIVG01003161001 Vitis vinifera HOM05D004451 ORTHO05D005177 1.4e-76 290.4 278 64.0
ClCG02G006310 Citrullus lanatus HOM05D004451 ORTHO05D005177 1.9e-76 290.0 287 62.7
COL.COLO4_32599 Corchorus olitorius HOM05D004451 ORTHO05D005177 1.9e-76 290.0 281 62.6
Haze_10166 Corylus avellana HOM05D004451 ORTHO05D005177 1.9e-76 290.0 278 63.3
Dinv15761 Davidia involucrata HOM05D004451 ORTHO05D005177 1.9e-76 290.0 261 65.1
ECA234G3549 Erigeron canadensis HOM05D004451 ORTHO05D005177 2.4e-76 289.7 254 66.1
Medtr1g107450 Medicago truncatula HOM05D004451 ORTHO05D005177 3.2e-76 289.3 271 62.7
Gorai.013G047100 Gossypium raimondii HOM05D004451 ORTHO05D005177 4.2e-76 288.9 281 63.3
SGA_v2.0_scaffold32G13039 Striga asiatica HOM05D004451 ORTHO05D005177 7.1e-76 288.1 259 65.3
Cpa.g.sc106.89 Carica papaya HOM05D004451 ORTHO05D005177 9.3e-76 287.7 276 63.8
RcHm_v2.0_Chr6g0255371 Rosa chinensis HOM05D004451 ORTHO05D005177 1.6e-75 287.0 273 60.8
Duzib248G1610 Durio zibethinus HOM05D004451 ORTHO05D005177 2.1e-75 286.6 244 68.4
Phvul.007G040300 Phaseolus vulgaris HOM05D004451 ORTHO05D005177 2.1e-75 286.6 272 63.2
Manes.07G069100 Manihot esculenta HOM05D004451 ORTHO05D005177 2.7e-75 286.2 287 61.0
Nitab4.5_0002815g0090 Nicotiana tabacum HOM05D004451 ORTHO05D005177 2.7e-75 286.2 260 68.1
MD05G1088600 Malus domestica HOM05D004451 ORTHO05D005177 3.5e-75 285.8 273 61.9
Nitab4.5_0005392g0030 Nicotiana tabacum HOM05D004451 ORTHO05D005177 3.5e-75 285.8 260 67.3
SalBow6G6827 Salvia bowleyana HOM05D004451 ORTHO05D005177 3.5e-75 285.8 261 68.2
Psat6g219200 Pisum sativum HOM05D004451 ORTHO05D005177 6.0e-75 285.0 271 61.3
Potri.009G096300 Populus trichocarpa HOM05D004451 ORTHO05D005177 6.0e-75 285.0 284 62.0
Hund06320 Selenicereus undatus HOM05D004451 ORTHO05D005177 6.0e-75 285.0 277 63.9
VMungo0720G2723 Vigna mungo HOM05D004451 ORTHO05D005177 6.0e-75 285.0 276 63.0
Duzib132G0413 Durio zibethinus HOM05D004451 ORTHO05D005177 7.8e-75 284.6 277 62.5
Cfa004574 Carpinus fangiana HOM05D004451 ORTHO05D005177 1.7e-74 283.5 274 61.7
Sed0001090 Sechium edule HOM05D004451 ORTHO05D005177 2.3e-74 283.1 282 61.7
Migut.B00385 Erythranthe guttata HOM05D004451 ORTHO05D005177 3.9e-74 282.3 263 64.6
MSTRG.20184 Avicennia marina HOM05D004451 ORTHO05D005177 6.6e-74 281.6 273 62.6
Glyma.10G261800 Glycine max HOM05D004451 ORTHO05D005177 6.6e-74 281.6 280 62.1
Lj5g0008999 Lotus japonicus HOM05D004451 ORTHO05D005177 6.6e-74 281.6 283 61.5
Ah.01g018220 Amaranthus hybridus HOM05D004451 ORTHO05D005177 8.7e-74 281.2 294 58.8
MD10G1096700 Malus domestica HOM05D004451 ORTHO05D005177 8.7e-74 281.2 273 60.1
FvH4_2g05240 Fragaria vesca HOM05D004451 ORTHO05D005177 1.1e-73 280.8 275 61.1
CiPaw.06G169600 Carya illinoinensis HOM05D004451 ORTHO05D005177 1.5e-73 280.4 274 61.7
Gorai.005G235200 Gossypium raimondii HOM05D004451 ORTHO05D005177 1.5e-73 280.4 280 61.1
TAR628G0195 Trochodendron aralioides HOM05D004451 ORTHO05D005177 1.5e-73 280.4 278 60.4
CsaV3_7G008120 Cucumis sativus L. HOM05D004451 ORTHO05D005177 1.9e-73 280.0 274 62.4
FAN27G3473 Fragaria x ananassa HOM05D004451 ORTHO05D005177 2.5e-73 279.6 274 60.2
Glyma.20G129100 Glycine max HOM05D004451 ORTHO05D005177 2.5e-73 279.6 275 62.9
THA.LOC104819557 Tarenaya hassleriana HOM05D004451 ORTHO05D005177 2.5e-73 279.6 285 59.6
FAN20G1574 Fragaria x ananassa HOM05D004451 ORTHO05D005177 3.3e-73 279.3 274 61.7
Gohir.D02G207300 Gossypium hirsutum HOM05D004451 ORTHO05D005177 7.3e-73 278.1 280 60.7
Actinidia05493 Actinidia chinensis HOM05D004451 ORTHO05D005177 9.6e-73 277.7 261 63.2
Ca_11078_v3 Cicer arietinum L. HOM05D004451 ORTHO05D005177 1.3e-72 277.3 257 64.2
Lj9C321G12 Lonicera japonica HOM05D004451 ORTHO05D005177 2.1e-72 276.6 199 72.9
CiPaw.05G011200 Carya illinoinensis HOM05D004451 ORTHO05D005177 2.8e-72 276.2 275 63.3
Lsat_1_v5_gn_5_114881 Lactuca sativa HOM05D004451 ORTHO05D005177 2.8e-72 276.2 272 62.5
TWI31G0226 Tripterygium wilfordii HOM05D004451 ORTHO05D005177 2.8e-72 276.2 275 60.7
Nn5g30419 Nelumbo nucifera HOM05D004451 ORTHO05D005177 3.6e-72 275.8 277 60.6
Sed0013348 Sechium edule HOM05D004451 ORTHO05D005177 4.8e-72 275.4 275 60.4
Gohir.A03G186500 Gossypium hirsutum HOM05D004451 ORTHO05D005177 8.1e-72 274.6 280 60.0
Manes.10G076300 Manihot esculenta HOM05D004451 ORTHO05D005177 1.2e-70 270.8 286 58.0
PSO170G0588 Papaver somniferum HOM05D004451 ORTHO05D005177 1.5e-70 270.4 254 62.2
PSO210G2671 Papaver somniferum HOM05D004451 ORTHO05D005177 1.5e-70 270.4 255 63.1
FAN15G2242 Fragaria x ananassa HOM05D004451 ORTHO05D005177 2.0e-70 270.0 286 58.0
Aqoxy5G01146 Aquilegia oxysepala HOM05D004451 ORTHO05D005177 2.6e-70 269.6 256 63.3
Lalb_Chr02g0145321 Lupinus albus HOM05D004451 ORTHO05D005177 2.6e-70 269.6 278 60.1
MELO3C018494.2 Cucumis melo HOM05D004451 ORTHO05D005177 4.5e-70 268.9 282 58.5
MSTRG.16716 Avicennia marina HOM05D004451 ORTHO05D005177 9.9e-70 267.7 232 67.2
PGSC0003DMG400025865 Solanum tuberosum HOM05D004451 ORTHO05D005177 1.7e-69 266.9 267 62.2
CDE04G0259 Ceratophyllum demersum HOM05D004451 ORTHO05D005177 2.2e-69 266.5 177 79.1
FAN24G2858 Fragaria x ananassa HOM05D004451 ORTHO05D005177 2.2e-69 266.5 241 63.5
Sp3g28570 Schrenkiella parvula HOM05D004451 ORTHO05D005177 3.8e-69 265.8 279 57.7
THA.LOC104807244 Tarenaya hassleriana HOM05D004451 ORTHO05D005177 3.8e-69 265.8 277 59.6
vmacro19524 Vaccinium macrocarpon HOM05D004451 ORTHO05D005177 3.8e-69 265.8 277 59.9
Solyc01g107640.3 Solanum lycopersicum HOM05D004451 ORTHO05D005177 4.9e-69 265.4 261 62.8
Sopen01g049830 Solanum pennellii HOM05D004451 ORTHO05D005177 6.4e-69 265.0 261 62.8
Sabra09G0074000 Salix brachista HOM05D004451 ORTHO05D005177 1.4e-68 263.8 327 54.7
A07p05320 Brassica napus HOM05D004451 ORTHO05D005177 1.9e-68 263.5 274 57.7
BraA07t28325Z Brassica rapa HOM05D004451 ORTHO05D005177 1.9e-68 263.5 274 57.7
HanXRQChr10g0292341 Helianthus annuus HOM05D004451 ORTHO05D005177 1.9e-68 263.5 276 59.4
Lalb_Chr06g0165471 Lupinus albus HOM05D004451 ORTHO05D005177 1.9e-68 263.5 271 58.3
ATR0691G207 Amborella trichopoda HOM05D004451 ORTHO05D005177 2.4e-68 263.1 245 64.5
BcaB03g16278 Brassica carinata HOM05D004451 ORTHO05D005177 2.4e-68 263.1 271 58.3
BcaC06g36051 Brassica carinata HOM05D004451 ORTHO05D005177 5.4e-68 261.9 250 60.4
C07p08470 Brassica napus HOM05D004451 ORTHO05D005177 5.4e-68 261.9 274 58.0
BolC7t41261H Brassica oleracea HOM05D004451 ORTHO05D005177 5.4e-68 261.9 274 58.0
Rhsim11G0160300 Rhododendron simsii HOM05D004451 ORTHO05D005177 1.2e-67 260.8 171 79.5
DCAR_021989 Daucus carota HOM05D004451 ORTHO05D005177 2.1e-67 260.0 261 59.0
Aa31LG8G13140 Aethionema arabicum HOM05D004451 ORTHO05D005177 2.7e-67 259.6 292 57.5
SGA_v2.0_scaffold225G43078 Striga asiatica HOM05D004451 ORTHO05D005177 3.5e-67 259.2 256 63.3
DCAR_001641 Daucus carota HOM05D004451 ORTHO05D005177 4.6e-67 258.8 174 75.3
Sabra16G0188700 Salix brachista HOM05D004451 ORTHO05D005177 4.6e-67 258.8 343 49.9
Peaxi162Scf00016g02324 Petunia axillaris HOM05D004451 ORTHO05D005177 1.0e-66 257.7 273 61.5
BcaB07g31794 Brassica carinata HOM05D004451 ORTHO05D005177 1.8e-66 256.9 250 60.0
CARHR105660 Cardamine hirsuta HOM05D004451 ORTHO05D005177 1.8e-66 256.9 274 58.0
AL3G47010 Arabidopsis lyrata HOM05D004451 ORTHO05D005177 2.3e-66 256.5 292 55.8
Carub.0003s2912 Capsella rubella HOM05D004451 ORTHO05D005177 2.3e-66 256.5 279 58.4
BcaB08g34587 Brassica carinata HOM05D004451 ORTHO05D005177 3.0e-66 256.1 281 58.0
BolC9t54158H Brassica oleracea HOM05D004451 ORTHO05D005177 3.0e-66 256.1 282 56.4
Thhalv10022775m.g Eutrema salsugineum HOM05D004451 ORTHO05D005177 3.0e-66 256.1 279 57.7
A09p10690 Brassica napus HOM05D004451 ORTHO05D005177 3.9e-66 255.8 278 58.3
BcaC04g23051 Brassica carinata HOM05D005496 ORTHO05D006677 5.1e-66 255.4 265 58.9
AT2G15290 Arabidopsis thaliana HOM05D004451 ORTHO05D005177 4.3e-65 252.3 277 56.0
C09p12690 Brassica napus HOM05D004451 ORTHO05D005177 9.6e-65 251.1 270 56.3
Os02g0187600 Oryza sativa ssp. japonica HOM05D004451 ORTHO05D005177 1.6e-64 250.4 166 77.1
SEGI_03021 Sequoiadendron giganteum HOM05D004451 ORTHO05D005177 3.7e-64 249.2 196 69.9
BcaC06g31580 Brassica carinata HOM05D004451 ORTHO05D005177 9.0e-63 244.6 172 76.7
HPP92_004770 Vanilla planifolia HOM05D004451 ORTHO05D005177 5.8e-62 241.9 250 57.2
Os06g0638100 Oryza sativa ssp. japonica HOM05D004451 ORTHO05D005177 7.6e-62 241.5 186 67.2
unitig_22.g5194 Utricularia gibba HOM05D004451 ORTHO05D005177 3.8e-61 239.2 271 55.4
Pp3c27_4260 Physcomitrium patens HOM05D004451 ORTHO05D005177 2.4e-60 236.5 181 68.5
Zm00001eb206410 Zea mays HOM05D004451 ORTHO05D005177 2.7e-59 233.0 174 69.0
Pp3c1_21740 Physcomitrium patens HOM05D004451 ORTHO05D005177 7.9e-59 231.5 190 64.2
Pp3c10_9500 Physcomitrium patens HOM05D004451 ORTHO05D005177 1.0e-58 231.1 190 63.2
BraA09t36712Z Brassica rapa HOM05D004451 ORTHO05D005177 3.9e-58 229.2 332 46.7
Mapoly0049s0087 Marchantia polymorpha HOM05D004451 ORTHO05D005177 8.7e-58 228.0 190 65.8
AagrBONN_evm.TU.Sc2ySwM_344.1281 Anthoceros agrestis HOM05D004451 ORTHO05D005177 2.5e-57 226.5 273 50.9
ECA240G4367 Erigeron canadensis HOM05D004451 ORTHO05D005177 8.2e-56 221.5 256 57.0
Zm00001eb387350 Zea mays HOM05D004451 ORTHO05D005177 9.0e-55 218.0 249 52.6
unitig_8.g3679 Utricularia gibba HOM05D004451 ORTHO05D005177 3.5e-51 206.1 166 65.1
CDE06G1648 Ceratophyllum demersum HOM05D004451 ORTHO05D005177 1.8e-47 193.7 211 58.8
CBR_g39267 Chara braunii HOM05D004451 ORTHO05D005177 2.9e-45 186.4 187 58.3
SMO118G0560 Selaginella moellendorffii HOM05D004451 ORTHO05D005177 2.9e-45 186.4 174 55.7
SHI05289 Sapria himalayana HOM05D004451 ORTHO05D005177 4.5e-38 162.5 159 54.7
CAN.G1231.10 Capsicum annuum HOM05D004451 ORTHO05D005177 6.7e-34 148.7 89 84.3
vmacro02006 Vaccinium macrocarpon HOM05D004451 ORTHO05D005177 2.0e-33 147.1 173 52.6
SEGI_11302 Sequoiadendron giganteum HOM05D004451 ORTHO05D005177 1.4e-31 141.0 111 70.3
Zm00001eb234680 Zea mays HOM05D004451 ORTHO05D005177 1.8e-31 140.6 163 51.5
TAR381G0937 Trochodendron aralioides HOM05D004451 ORTHO05D005177 8.0e-27 125.2 72 87.5
MCO10G127 Micromonas commoda HOM05D004451 ORTHO05D005177 1.0e-26 124.8 211 37.9
HPP92_008279 Vanilla planifolia HOM05D004451 ORTHO05D005177 7.0e-23 112.1 139 54.7
Cre10.g454734 Chlamydomonas reinhardtii HOM05D000133 ORTHO05D005177 2.0e-22 110.5 280 32.9
CBR_g28861 Chara braunii HOM05D004451 ORTHO05D009492 2.9e-21 106.7 87 63.2
HanXRQChr01g0018911 Helianthus annuus HOM05D004451 ORTHO05D005177 1.5e-20 104.4 63 84.1
HanXRQChr17g0567381 Helianthus annuus HOM05D004451 ORTHO05D005177 4.2e-20 102.8 63 82.5
PRCOL_00004645 Prasinoderma coloniale HOM05D004451 ORTHO05D005177 1.5e-17 94.4 203 35.5
HanXRQChr05g0151971 Helianthus annuus HOM05D002664 ORTHO05D002974 6.1e-11 72.4 59 66.1
Cre11.g467759 Chlamydomonas reinhardtii HOM05D027551 ORTHO05D005177 1.4e-07 61.2 170 30.6
CAN.G3385.1 Capsicum annuum HOM05D004451 ORTHO05D005177 3.1e-07 60.1 43 74.4


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