Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc17g0002930 Simmondsia chinensis HOM05D002451 ORTHO05D005601 2.5e-101 372.1 183 100.0
Sc10g0007590 Simmondsia chinensis HOM05D002451 ORTHO05D005601 2.2e-89 332.4 182 89.6
EL10Ac9g21204 Beta vulgaris HOM05D002451 ORTHO05D005601 1.5e-66 256.5 180 70.0
AUR62031915 Chenopodium quinoa HOM05D002451 ORTHO05D005601 7.0e-64 247.7 183 66.1
AUR62022206 Chenopodium quinoa HOM05D002451 ORTHO05D005601 1.6e-63 246.5 183 67.2
Hund07601 Selenicereus undatus HOM05D002451 ORTHO05D005601 4.6e-63 245.0 180 67.2
Dinv37977 Davidia involucrata HOM05D002451 ORTHO05D005601 1.9e-61 239.6 180 66.7
Duzib192G0210 Durio zibethinus HOM05D002451 ORTHO05D005601 1.5e-58 229.9 180 62.8
Cfa003647 Carpinus fangiana HOM05D002451 ORTHO05D005601 2.6e-58 229.2 180 63.3
GSVIVG01016980001 Vitis vinifera HOM05D002451 ORTHO05D005601 7.5e-58 227.6 180 63.9
Actinidia32098 Actinidia chinensis HOM05D002451 ORTHO05D005601 2.2e-57 226.1 180 62.2
CsaV3_7G035270 Cucumis sativus L. HOM05D002451 ORTHO05D005601 3.7e-57 225.3 180 62.8
Manes.11G033500 Manihot esculenta HOM05D002451 ORTHO05D005601 3.7e-57 225.3 180 61.1
CiPaw.01G231400 Carya illinoinensis HOM05D002451 ORTHO05D005601 8.3e-57 224.2 180 62.8
Haze_15848 Corylus avellana HOM05D002451 ORTHO05D005601 1.1e-56 223.8 180 62.2
Sed0021872 Sechium edule HOM05D002451 ORTHO05D005601 1.4e-56 223.4 180 61.1
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 1.4e-56 223.4 181 64.1
Thecc.06G100100 Theobroma cacao HOM05D002451 ORTHO05D005601 3.2e-56 222.2 180 60.6
QL05p020031 Quercus lobata HOM05D002451 ORTHO05D005601 7.1e-56 221.1 182 61.0
COL.COLO4_30513 Corchorus olitorius HOM05D002451 ORTHO05D005601 9.2e-56 220.7 180 60.0
Migut.I00897 Erythranthe guttata HOM05D002451 ORTHO05D005601 2.1e-55 219.5 180 62.2
Potri.003G048800 Populus trichocarpa HOM05D002451 ORTHO05D005601 2.3e-54 216.1 181 61.3
CANSAT56G2471 Cannabis sativa HOM05D002451 ORTHO05D005601 3.9e-54 215.3 179 58.1
Prupe.3G059000 Prunus persica HOM05D002451 ORTHO05D005601 3.9e-54 215.3 176 59.7
Aqoxy7G01406 Aquilegia oxysepala HOM05D002451 ORTHO05D005601 5.1e-54 214.9 178 61.2
MSTRG.11027 Avicennia marina HOM05D002451 ORTHO05D005601 5.1e-54 214.9 180 58.9
Lj9C513G3 Lonicera japonica HOM05D002451 ORTHO05D005601 5.1e-54 214.9 180 58.3
Lalb_Chr14g0373021 Lupinus albus HOM05D002451 ORTHO05D005601 1.1e-53 213.8 180 59.4
Rhsim08G0227600 Rhododendron simsii HOM05D002451 ORTHO05D005601 1.5e-53 213.4 180 58.3
MELO3C024437.2 Cucumis melo HOM05D002451 ORTHO05D005601 1.9e-53 213.0 187 58.8
Nn8g39071 Nelumbo nucifera HOM05D002451 ORTHO05D005601 1.9e-53 213.0 181 59.7
RcHm_v2.0_Chr2g0140541 Rosa chinensis HOM05D002451 ORTHO05D005601 1.9e-53 213.0 180 58.9
MD09G1202800 Malus domestica HOM05D002451 ORTHO05D005601 2.5e-53 212.6 176 58.0
vmacro18852 Vaccinium macrocarpon HOM05D002451 ORTHO05D005601 4.3e-53 211.8 180 58.3
FvH4_6g32400 Fragaria vesca HOM05D002451 ORTHO05D005601 5.6e-53 211.5 180 59.4
FAN05G4332 Fragaria x ananassa HOM05D002451 ORTHO05D005601 5.6e-53 211.5 180 59.4
FAN14G4820 Fragaria x ananassa HOM05D002451 ORTHO05D005601 5.6e-53 211.5 180 59.4
Gorai.010G230600 Gossypium raimondii HOM05D002451 ORTHO05D005601 5.6e-53 211.5 180 58.3
TWI12G0408 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 7.3e-53 211.1 180 58.9
TAR624G0206 Trochodendron aralioides HOM05D002451 ORTHO05D005601 1.6e-52 209.9 159 68.6
Gohir.D06G197800 Gossypium hirsutum HOM05D002451 ORTHO05D005601 2.1e-52 209.5 180 57.8
Atru.chr1.3524 Acer truncatum HOM05D002451 ORTHO05D005601 2.8e-52 209.1 178 60.7
PSO832G2466 Papaver somniferum HOM05D002451 ORTHO05D005601 2.8e-52 209.1 178 58.4
Cc04_g02550 Coffea canephora HOM05D002451 ORTHO05D005601 4.7e-52 208.4 180 58.3
FAN09G4229 Fragaria x ananassa HOM05D002451 ORTHO05D005601 4.7e-52 208.4 180 58.9
Gohir.A06G189400 Gossypium hirsutum HOM05D002451 ORTHO05D005601 4.7e-52 208.4 182 57.7
Nitab4.5_0006467g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 4.7e-52 208.4 180 58.3
FAN02G1073 Fragaria x ananassa HOM05D002451 ORTHO05D005601 6.2e-52 208.0 180 58.9
Peaxi162Scf00038g01032 Petunia axillaris HOM05D002451 ORTHO05D005601 6.2e-52 208.0 180 57.8
Ca_01165_v3 Cicer arietinum L. HOM05D002451 ORTHO05D005601 1.1e-51 207.2 180 58.9
PSO063G3373 Papaver somniferum HOM05D002451 ORTHO05D005601 1.4e-51 206.8 178 58.4
Ciclev10024743m.g Citrus clementina HOM05D002451 ORTHO05D005601 1.2e-50 203.8 180 59.4
Solyc03g121030.2 Solanum lycopersicum HOM05D002451 ORTHO05D005601 1.2e-50 203.8 180 55.6
Nitab4.5_0006902g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 2.0e-50 203.0 180 56.7
THA.LOC104809828 Tarenaya hassleriana HOM05D002451 ORTHO05D005601 2.6e-50 202.6 182 58.8
Phvul.005G166100 Phaseolus vulgaris HOM05D002451 ORTHO05D005601 3.4e-50 202.2 180 56.7
PGR102G3176 Punica granatum HOM05D002451 ORTHO05D005601 3.4e-50 202.2 178 54.5
Sopen03g039860 Solanum pennellii HOM05D002451 ORTHO05D005601 4.4e-50 201.8 180 55.6
Psat5g295800 Pisum sativum HOM05D002451 ORTHO05D005601 7.6e-50 201.1 180 56.7
TPR.G6596 Trifolium pratense HOM05D002451 ORTHO05D005601 7.6e-50 201.1 180 56.7
Lj1g0009957 Lotus japonicus HOM05D002451 ORTHO05D005601 9.9e-50 200.7 180 56.1
Eucgr.F03079 Eucalyptus grandis HOM05D002451 ORTHO05D005601 2.2e-49 199.5 178 55.6
Lsat_1_v5_gn_4_97440 Lactuca sativa HOM05D002451 ORTHO05D005601 6.4e-49 198.0 182 55.5
CAN.G1143.14 Capsicum annuum HOM05D002451 ORTHO05D005601 4.1e-48 195.3 180 55.6
Glyma.15G019600 Glycine max HOM05D002451 ORTHO05D005601 4.1e-48 195.3 180 57.2
Sp2g18530 Schrenkiella parvula HOM05D002451 ORTHO05D005601 4.1e-48 195.3 178 56.7
AT5G48120 Arabidopsis thaliana HOM05D002451 ORTHO05D005601 7.1e-48 194.5 182 54.9
Medtr2g100870 Medicago truncatula HOM05D002451 ORTHO05D005601 7.1e-48 194.5 180 54.4
Oeu017119.1 Olea europaea HOM05D002451 ORTHO05D005601 9.2e-48 194.1 180 54.4
AL8G20730 Arabidopsis lyrata HOM05D002451 ORTHO05D005601 2.7e-47 192.6 178 54.5
CSS0044368 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D005601 3.5e-47 192.2 180 57.8
Carub.0008s0769 Capsella rubella HOM05D002451 ORTHO05D005601 1.3e-46 190.3 178 54.5
Thhalv10003552m.g Eutrema salsugineum HOM05D002451 ORTHO05D005601 2.3e-46 189.5 178 55.6
Aa31LG11G5160 Aethionema arabicum HOM05D002451 ORTHO05D005601 3.0e-46 189.1 189 54.5
Medtr5g085950 Medicago truncatula HOM05D002451 ORTHO05D005601 3.9e-46 188.7 180 53.9
Aa31sc1931G10 Aethionema arabicum HOM05D002451 ORTHO05D005601 6.6e-46 188.0 187 54.5
Glyma.13G354600 Glycine max HOM05D002451 ORTHO05D005601 1.1e-45 187.2 180 56.7
BraA02t08709Z Brassica rapa HOM05D002451 ORTHO05D005601 1.9e-45 186.4 180 53.3
arahy.Tifrunner.gnm1.ann1.T566S8 Arachis hypogaea HOM05D002451 ORTHO05D005601 3.3e-45 185.7 180 51.1
Sabra03G0029300 Salix brachista HOM05D002451 ORTHO05D005601 3.3e-45 185.7 240 45.0
HanXRQChr09g0276251 Helianthus annuus HOM05D002451 ORTHO05D005601 4.3e-45 185.3 182 51.1
arahy.Tifrunner.gnm1.ann1.65X03I Arachis hypogaea HOM05D002451 ORTHO05D005601 1.2e-44 183.7 180 51.1
C02p56250 Brassica napus HOM05D002451 ORTHO05D005601 2.8e-44 182.6 180 52.8
BcaC03g17628 Brassica carinata HOM05D002451 ORTHO05D005601 3.6e-44 182.2 180 52.8
BolC2t11683H Brassica oleracea HOM05D002451 ORTHO05D005601 3.6e-44 182.2 180 52.8
ECA232G2699 Erigeron canadensis HOM05D002451 ORTHO05D005601 8.1e-44 181.0 181 51.9
ATR0705G185 Amborella trichopoda HOM05D002451 ORTHO05D005601 1.1e-43 180.6 180 51.7
BcaB07g30001 Brassica carinata HOM05D002451 ORTHO05D005601 1.8e-43 179.9 180 52.8
CARHR259290 Cardamine hirsuta HOM05D002451 ORTHO05D005601 1.8e-43 179.9 182 51.6
A02p37220 Brassica napus HOM05D002451 ORTHO05D005601 2.4e-43 179.5 180 51.7
Os07g0177100 Oryza sativa ssp. japonica HOM05D002451 ORTHO05D005601 1.3e-41 173.7 180 49.4
SEGI_26537 Sequoiadendron giganteum HOM05D002451 ORTHO05D005601 4.2e-40 168.7 176 52.3
Zm00001eb301230 Zea mays HOM05D002451 ORTHO05D005601 7.8e-39 164.5 146 54.8
MBI04_g20307_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D005601 7.3e-37 157.9 222 43.7
HPP92_007690 Vanilla planifolia HOM05D002451 ORTHO05D005601 3.6e-36 155.6 183 45.4
Ah.01g022090 Amaranthus hybridus HOM05D002451 ORTHO05D005601 3.4e-34 149.1 180 43.9
Pp3c9_4950 Physcomitrium patens HOM05D002451 ORTHO05D005601 1.9e-32 143.3 179 39.7
Mapoly0036s0119 Marchantia polymorpha HOM05D002451 ORTHO05D005601 3.9e-30 135.6 141 45.4
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 8.7e-30 134.4 195 40.0
TWI75G1452 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 2.8e-28 129.4 118 58.5
ClCG09G000210 Citrullus lanatus HOM05D002451 ORTHO05D005601 9.0e-27 124.4 145 49.0
DCAR_023080 Daucus carota HOM05D002451 ORTHO05D005601 9.0e-27 124.4 118 56.8
SMO111G0185 Selaginella moellendorffii HOM05D002451 ORTHO05D005601 3.8e-25 119.0 138 44.2
Cpa.g.sc25.4 Carica papaya HOM05D002451 ORTHO05D005601 5.5e-24 115.2 81 63.0
Psat4g171400 Pisum sativum HOM05D002451 ORTHO05D005601 1.5e-21 107.1 106 54.7
unitig_88.g27601 Utricularia gibba HOM05D002451 ORTHO05D005601 2.5e-21 106.3 117 48.7
Psat3g036640 Pisum sativum HOM05D002451 ORTHO05D005601 9.6e-21 104.4 106 54.7
ClCG09G000220 Citrullus lanatus HOM05D002451 ORTHO05D005601 8.2e-20 101.3 68 64.7
Cpa.g.sc25.5 Carica papaya HOM05D002451 ORTHO05D005601 2.0e-18 96.7 99 56.6
CBR_g26190 Chara braunii HOM05D002451 ORTHO05D005601 1.3e-14 84.0 189 31.2
SHI11090 Sapria himalayana HOM05D002451 ORTHO05D005601 1.8e-14 83.6 62 53.2
Cre13.g605050 Chlamydomonas reinhardtii HOM05D002451 ORTHO05D005601 9.7e-13 77.8 145 33.1
CDE05G2530 Ceratophyllum demersum HOM05D002451 ORTHO05D005601 1.6e-12 77.0 62 53.2
QL05p020001 Quercus lobata HOM05D002451 ORTHO05D005601 8.5e-09 64.7 119 39.5
vmacro17797 Vaccinium macrocarpon HOM05D000003 ORTHO05D000007 1.2e-07 60.8 89 40.4
Medtr5g055460 Medicago truncatula HOM05D002451 ORTHO05D005601 4.6e-07 58.9 51 52.9
MCO12G207 Micromonas commoda HOM05D002451 ORTHO05D005601 7.9e-07 58.2 110 28.2
Zm00001eb320400 Zea mays HOM05D002451 ORTHO05D005601 1.4e-06 57.4 100 38.0


User provided reference genes

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