Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc17g0002020 Simmondsia chinensis HOM05D008362 ORTHO05D010554 2.3e-48 195.7 130 100.0
CSS0045887 Camellia sinensis var. sinensis HOM05D008362 ORTHO05D010554 1.6e-09 66.6 106 42.5
Hund05585 Selenicereus undatus HOM05D008362 ORTHO05D010554 2.1e-09 66.2 94 46.8
QL09p049939 Quercus lobata HOM05D008362 ORTHO05D010554 7.8e-09 64.3 76 50.0
GSVIVG01006384001 Vitis vinifera HOM05D008362 ORTHO05D010554 3.9e-08 62.0 89 46.1
CiPaw.13G050500 Carya illinoinensis HOM05D008362 ORTHO05D010554 6.6e-08 61.2 42 69.0
PGSC0003DMG400020171 Solanum tuberosum HOM05D008362 ORTHO05D010554 8.7e-08 60.8 45 71.1
HanXRQChr06g0172231 Helianthus annuus HOM05D008362 ORTHO05D010554 1.5e-07 60.1 76 46.1
Hma1.2p1_0226F.1_g095250 Hydrangea macrophylla HOM05D008362 ORTHO05D010554 1.9e-07 59.7 39 74.4
Solyc06g083250.4 Solanum lycopersicum HOM05D008362 ORTHO05D010554 1.9e-07 59.7 36 77.8
Sopen06g034630 Solanum pennellii HOM05D008362 ORTHO05D010554 7.3e-07 57.8 103 40.8
ATR0561G249 Amborella trichopoda HOM05D008362 ORTHO05D010554 9.6e-07 57.4 44 68.2
Lalb_Chr07g0194111 Lupinus albus HOM05D008362 ORTHO05D010554 1.3e-06 57.0 90 46.7
arahy.Tifrunner.gnm1.ann1.L802W9 Arachis hypogaea HOM05D008362 ORTHO05D010554 1.6e-06 56.6 84 45.2
COL.COLO4_16103 Corchorus olitorius HOM05D008362 ORTHO05D010554 2.8e-06 55.8 70 48.6
Gohir.A07G092300 Gossypium hirsutum HOM05D008362 ORTHO05D010554 2.8e-06 55.8 95 43.2
Lj1C90G7 Lonicera japonica HOM05D006751 ORTHO05D008710 2.8e-06 55.8 39 71.8
PGR083G0575 Punica granatum HOM05D008362 ORTHO05D010554 2.8e-06 55.8 69 43.5
VMungo0331G0307 Vigna mungo HOM05D008362 ORTHO05D010554 3.6e-06 55.5 38 68.4
Lj3g0027645 Lotus japonicus HOM05D008362 ORTHO05D010554 4.8e-06 55.1 38 76.3
unitig_746.g26595 Utricularia gibba HOM05D008362 ORTHO05D010554 6.2e-06 54.7 102 37.3
Psat4g204280 Pisum sativum HOM05D008362 ORTHO05D010554 8.1e-06 54.3 84 46.4


User provided reference genes

Program Settings