Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc17g0001500 Simmondsia chinensis HOM05D007261 ORTHO05D009163 3.6e-109 398.3 202 100.0
Hund12712 Selenicereus undatus HOM05D007261 ORTHO05D009163 5.0e-87 324.7 201 82.1
Ah.03g147240 Amaranthus hybridus HOM05D007261 ORTHO05D009163 3.6e-85 318.5 201 78.6
Manes.09G172600 Manihot esculenta HOM05D007261 ORTHO05D009163 1.0e-84 317.0 197 79.2
AUR62003485 Chenopodium quinoa HOM05D007261 ORTHO05D009163 5.2e-84 314.7 201 78.1
RcHm_v2.0_Chr4g0428371 Rosa chinensis HOM05D007261 ORTHO05D009163 6.8e-84 314.3 200 75.5
Prupe.1G211100 Prunus persica HOM05D007261 ORTHO05D009163 1.2e-83 313.5 200 75.0
Sabra01G0049700 Salix brachista HOM05D007261 ORTHO05D009163 1.2e-83 313.5 197 76.6
PGR119G1620 Punica granatum HOM05D007261 ORTHO05D009163 3.4e-83 312.0 200 74.5
EL10Ac6g15388 Beta vulgaris HOM05D007261 ORTHO05D009163 4.4e-83 311.6 201 76.6
MD16G1145000 Malus domestica HOM05D007261 ORTHO05D009163 7.5e-83 310.8 200 75.5
FvH4_4g22120 Fragaria vesca HOM05D007261 ORTHO05D009163 9.8e-83 310.5 200 75.0
FAN07G0598 Fragaria x ananassa HOM05D007261 ORTHO05D009163 9.8e-83 310.5 200 74.5
FAN12G3746 Fragaria x ananassa HOM05D007261 ORTHO05D009163 2.2e-82 309.3 200 74.5
AUR62017794 Chenopodium quinoa HOM05D007261 ORTHO05D009163 4.8e-82 308.1 197 76.6
Dinv04437 Davidia involucrata HOM05D007261 ORTHO05D009163 4.8e-82 308.1 198 76.3
FAN17G2458 Fragaria x ananassa HOM05D007261 ORTHO05D009163 4.8e-82 308.1 200 74.0
MELO3C026753.2 Cucumis melo HOM05D007261 ORTHO05D009163 6.3e-82 307.8 199 77.4
MD13G1134400 Malus domestica HOM05D007261 ORTHO05D009163 6.3e-82 307.8 200 73.5
Potri.001G070800 Populus trichocarpa HOM05D007261 ORTHO05D009163 1.8e-81 306.2 197 76.1
CsaV3_3G043490 Cucumis sativus L. HOM05D007261 ORTHO05D009163 4.1e-81 305.1 199 76.9
Cfa009475 Carpinus fangiana HOM05D007261 ORTHO05D009163 1.6e-80 303.1 197 75.6
Nn4g22065 Nelumbo nucifera HOM05D007261 ORTHO05D009163 2.0e-80 302.8 193 76.7
Hma1.2p1_0738F.1_g210990 Hydrangea macrophylla HOM05D007261 ORTHO05D009163 3.5e-80 302.0 197 76.1
ClCG10G013090 Citrullus lanatus HOM05D007261 ORTHO05D009163 1.0e-79 300.4 202 76.2
Rhsim12G0015700 Rhododendron simsii HOM05D007261 ORTHO05D009163 1.0e-79 300.4 194 78.4
Sed0025955 Sechium edule HOM05D007261 ORTHO05D009163 1.0e-79 300.4 199 76.4
QL03p048277 Quercus lobata HOM05D007261 ORTHO05D009163 3.8e-79 298.5 189 76.7
Cpa.g.sc38.54 Carica papaya HOM05D007261 ORTHO05D009163 5.0e-79 298.1 197 73.1
Cc11_g14850 Coffea canephora HOM05D007261 ORTHO05D009163 1.1e-78 297.0 201 76.1
TWI18G1332 Tripterygium wilfordii HOM05D007261 ORTHO05D009163 1.9e-78 296.2 197 72.1
GSVIVG01001121001 Vitis vinifera HOM05D007261 ORTHO05D009163 4.2e-78 295.0 188 78.2
TAR629G2200 Trochodendron aralioides HOM05D007261 ORTHO05D009163 7.2e-78 294.3 195 74.4
vmacro01006 Vaccinium macrocarpon HOM05D007261 ORTHO05D009163 1.2e-77 293.5 195 77.4
Nitab4.5_0005286g0010 Nicotiana tabacum HOM05D007261 ORTHO05D009163 6.1e-77 291.2 196 73.5
Thecc.01G239300 Theobroma cacao HOM05D007261 ORTHO05D009163 6.1e-77 291.2 196 74.5
Aqoxy5G04229 Aquilegia oxysepala HOM05D007261 ORTHO05D009163 1.8e-76 289.7 195 70.3
Duzib264G0686 Durio zibethinus HOM05D007261 ORTHO05D009163 5.2e-76 288.1 196 73.5
Eucgr.J01661 Eucalyptus grandis HOM05D007261 ORTHO05D009163 5.2e-76 288.1 200 69.0
PSO017G6922 Papaver somniferum HOM05D007261 ORTHO05D009163 5.2e-76 288.1 192 74.0
arahy.Tifrunner.gnm1.ann1.EWZS38 Arachis hypogaea HOM05D007261 ORTHO05D009163 6.8e-76 287.7 196 73.0
arahy.Tifrunner.gnm1.ann1.X3R9N8 Arachis hypogaea HOM05D007261 ORTHO05D009163 6.8e-76 287.7 196 73.0
CANSAT01G0240 Cannabis sativa HOM05D007261 ORTHO05D009163 6.8e-76 287.7 189 71.4
Peaxi162Scf01167g00120 Petunia axillaris HOM05D007261 ORTHO05D009163 2.6e-75 285.8 196 73.0
Ciclev10029098m.g Citrus clementina HOM05D007261 ORTHO05D009163 7.5e-75 284.3 199 70.9
TWI36G0866 Tripterygium wilfordii HOM05D007261 ORTHO05D009163 7.5e-75 284.3 195 71.3
ATR0582G128 Amborella trichopoda HOM05D007261 ORTHO05D009163 1.7e-74 283.1 197 69.0
HanXRQChr06g0175371 Helianthus annuus HOM05D007261 ORTHO05D009163 1.7e-74 283.1 204 70.6
PSO478G2703 Papaver somniferum HOM05D007261 ORTHO05D009163 1.7e-74 283.1 192 72.9
CSS0010700 Camellia sinensis var. sinensis HOM05D007261 ORTHO05D009163 2.2e-74 282.7 201 70.6
Atru.chr12.1480 Acer truncatum HOM05D007261 ORTHO05D009163 4.9e-74 281.6 200 68.5
CSS0041929 Camellia sinensis var. sinensis HOM05D007261 ORTHO05D009163 1.1e-73 280.4 201 70.1
HPP92_020118 Vanilla planifolia HOM05D007261 ORTHO05D009163 1.1e-73 280.4 193 73.6
SalBow2G2703 Salvia bowleyana HOM05D007261 ORTHO05D009163 1.8e-73 279.6 222 65.3
Oeu021934.1 Olea europaea HOM05D007261 ORTHO05D009163 2.4e-73 279.3 207 72.5
CAN.G624.13 Capsicum annuum HOM05D007261 ORTHO05D009163 4.1e-73 278.5 198 71.2
Gorai.007G068700 Gossypium raimondii HOM05D007261 ORTHO05D009163 7.0e-73 277.7 193 72.0
Aa31LG7G10040 Aethionema arabicum HOM05D007261 ORTHO05D009163 9.2e-73 277.3 198 68.2
Gohir.D11G063500 Gossypium hirsutum HOM05D007261 ORTHO05D009163 9.2e-73 277.3 193 72.0
Gohir.A11G059400 Gossypium hirsutum HOM05D007261 ORTHO05D009163 2.0e-72 276.2 193 71.5
AL1G52610 Arabidopsis lyrata HOM05D007261 ORTHO05D009163 2.7e-72 275.8 198 68.7
PGSC0003DMG400002189 Solanum tuberosum HOM05D007261 ORTHO05D009163 2.7e-72 275.8 196 71.4
Lalb_Chr04g0257321 Lupinus albus HOM05D007261 ORTHO05D009163 3.5e-72 275.4 196 69.4
Solyc11g040130.2 Solanum lycopersicum HOM05D007261 ORTHO05D009163 3.5e-72 275.4 196 70.9
AT1G44960 Arabidopsis thaliana HOM05D007261 ORTHO05D009163 5.9e-72 274.6 198 69.2
ECA246G1741 Erigeron canadensis HOM05D007261 ORTHO05D009163 7.8e-72 274.2 193 71.5
CARHR036160 Cardamine hirsuta HOM05D007261 ORTHO05D009163 1.0e-71 273.9 198 67.2
CDE05G0176 Ceratophyllum demersum HOM05D007261 ORTHO05D009163 1.0e-71 273.9 193 68.9
Lsat_1_v5_gn_3_33201 Lactuca sativa HOM05D007261 ORTHO05D009163 1.0e-71 273.9 194 71.6
THA.LOC104801410 Tarenaya hassleriana HOM05D007261 ORTHO05D009163 1.3e-71 273.5 197 68.0
Sopen11g017340 Solanum pennellii HOM05D007261 ORTHO05D009163 2.3e-71 272.7 196 69.9
Lj1g0023925 Lotus japonicus HOM05D007261 ORTHO05D009163 2.9e-71 272.3 199 65.3
Carub.0001s3543 Capsella rubella HOM05D007261 ORTHO05D009163 3.9e-71 271.9 198 67.7
Migut.K01136 Erythranthe guttata HOM05D007261 ORTHO05D009163 5.0e-71 271.6 200 69.0
VMungo1383G1401 Vigna mungo HOM05D007261 ORTHO05D009163 2.5e-70 269.2 199 68.3
Lj3A1078G18 Lonicera japonica HOM05D007261 ORTHO05D009163 5.6e-70 268.1 173 74.0
Thhalv10011722m.g Eutrema salsugineum HOM05D007261 ORTHO05D009163 9.5e-70 267.3 197 66.5
BcaB07g33898 Brassica carinata HOM05D007261 ORTHO05D009163 2.1e-69 266.2 199 66.8
Phvul.008G004000 Phaseolus vulgaris HOM05D007261 ORTHO05D009163 2.8e-69 265.8 199 67.3
Psat3g206640 Pisum sativum HOM05D007261 ORTHO05D009163 3.6e-69 265.4 204 66.2
C06p01120 Brassica napus HOM05D007261 ORTHO05D009163 6.1e-69 264.6 198 67.2
BolC6t35245H Brassica oleracea HOM05D007261 ORTHO05D009163 6.1e-69 264.6 198 67.2
Ca_04086_v3 Cicer arietinum L. HOM05D007261 ORTHO05D009163 6.1e-69 264.6 203 65.0
BraA10t42964Z Brassica rapa HOM05D007261 ORTHO05D009163 1.4e-68 263.5 199 67.3
A10p07140 Brassica napus HOM05D007261 ORTHO05D009163 1.8e-68 263.1 199 67.3
Sp1g33800 Schrenkiella parvula HOM05D007261 ORTHO05D009163 3.1e-68 262.3 198 66.7
Glyma.18G298600 Glycine max HOM05D007261 ORTHO05D009163 4.0e-68 261.9 199 66.8
SEGI_21849 Sequoiadendron giganteum HOM05D007261 ORTHO05D009163 5.2e-68 261.5 185 69.2
Glyma.08G363400 Glycine max HOM05D007261 ORTHO05D009163 2.6e-67 259.2 199 65.3
Medtr7g006790 Medicago truncatula HOM05D007261 ORTHO05D009163 7.5e-67 257.7 206 62.6
Medtr7g006800 Medicago truncatula HOM05D007261 ORTHO05D009163 7.5e-67 257.7 206 62.6
TPR.G9720 Trifolium pratense HOM05D007261 ORTHO05D009163 2.9e-66 255.8 175 70.9
Os11g0537300 Oryza sativa ssp. japonica HOM05D007261 ORTHO05D009163 1.1e-65 253.8 196 64.8
Zm00001eb197910 Zea mays HOM05D007261 ORTHO05D009163 1.9e-65 253.1 198 64.6
Haze_12532 Corylus avellana HOM05D007261 ORTHO05D009163 3.9e-63 245.4 339 43.4
unitig_26.g10437 Utricularia gibba HOM05D000361 ORTHO05D007482 2.8e-61 239.2 195 60.0
CiPaw.05G097700 Carya illinoinensis HOM05D007261 ORTHO05D009163 7.8e-56 221.1 197 61.4
SMO351G0136 Selaginella moellendorffii HOM05D007261 ORTHO05D009163 2.3e-55 219.5 168 63.7
Mapoly0073s0041 Marchantia polymorpha HOM05D007261 ORTHO05D009163 3.9e-55 218.8 175 62.3
AagrBONN_evm.TU.Sc2ySwM_228.5286 Anthoceros agrestis HOM05D007261 ORTHO05D009163 1.5e-54 216.9 184 60.3
Pp3c19_21680 Physcomitrium patens HOM05D007261 ORTHO05D009163 3.6e-53 212.2 171 61.4
HPP92_020128 Vanilla planifolia HOM05D007261 ORTHO05D009163 1.0e-47 194.1 162 64.8
CBR_g44525 Chara braunii HOM05D007261 ORTHO05D009163 1.5e-43 180.3 183 51.9
BcaC08g42890 Brassica carinata HOM05D007261 ORTHO05D009163 5.8e-43 178.3 138 63.8
CDE05G1764 Ceratophyllum demersum HOM05D007261 ORTHO05D009163 3.6e-37 159.1 118 62.7
Potri.003G159901 Populus trichocarpa HOM05D007261 ORTHO05D009163 1.8e-36 156.8 98 77.6
Nitab4.5_0002113g0010 Nicotiana tabacum HOM05D000361 ORTHO05D007482 5.3e-36 155.2 98 78.6
Actinidia30573 Actinidia chinensis HOM05D007261 ORTHO05D009163 6.9e-36 154.8 87 85.1
PRCOL_00004129 Prasinoderma coloniale HOM05D007261 ORTHO05D009163 2.4e-20 103.2 196 37.8
Hma1.2p1_0738F.1_g211000 Hydrangea macrophylla HOM05D007261 ORTHO05D009163 1.9e-09 67.0 39 87.2
Cre06.g262000 Chlamydomonas reinhardtii HOM05D001530 ORTHO05D003676 2.3e-07 60.1 141 27.0
Pp3c25_4890 Physcomitrium patens HOM05D001530 ORTHO05D003676 7.4e-06 55.1 191 27.2


User provided reference genes

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