Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc17g0001440 Simmondsia chinensis HOM05D000358 ORTHO05D009346 2.4e-84 315.5 158 100.0
EL10Ac5g10557 Beta vulgaris HOM05D000358 ORTHO05D009346 6.3e-37 157.9 144 59.7
AUR62028609 Chenopodium quinoa HOM05D000358 ORTHO05D009346 7.0e-36 154.5 146 60.3
TAR375G0394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 1.6e-35 153.3 137 61.3
Hund09500 Selenicereus undatus HOM05D000358 ORTHO05D009346 3.5e-35 152.1 153 54.9
TAR636G2394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 1.3e-34 150.2 138 60.1
Glyma.03G155200 Glycine max HOM05D000358 ORTHO05D009346 1.9e-33 146.4 139 56.8
CANSAT25G1780 Cannabis sativa HOM05D000358 ORTHO05D009346 2.5e-33 146.0 113 67.3
Ciclev10022514m.g Citrus clementina HOM05D000358 ORTHO05D009346 2.5e-33 146.0 132 57.6
PSO761G0166 Papaver somniferum HOM05D000358 ORTHO05D009346 4.3e-33 145.2 149 53.7
PSO210G0760 Papaver somniferum HOM05D000358 ORTHO05D009346 7.3e-33 144.4 149 53.7
BcaC03g16171 Brassica carinata HOM05D000358 ORTHO05D009346 1.2e-32 143.7 106 67.0
A02p24950 Brassica napus HOM05D000358 ORTHO05D009346 1.2e-32 143.7 106 67.0
C02p39090 Brassica napus HOM05D000358 ORTHO05D009346 1.2e-32 143.7 106 67.0
BolC2t09919H Brassica oleracea HOM05D000358 ORTHO05D009346 1.2e-32 143.7 106 67.0
BraA02t07485Z Brassica rapa HOM05D000358 ORTHO05D009346 1.2e-32 143.7 106 67.0
vmacro02584 Vaccinium macrocarpon HOM05D000358 ORTHO05D009346 1.2e-32 143.7 126 61.1
Sabra05G0160900 Salix brachista HOM05D000358 ORTHO05D009346 2.8e-32 142.5 125 60.0
Cpa.g.sc52.51 Carica papaya HOM05D000358 ORTHO05D009346 3.6e-32 142.1 145 57.9
CSS0040373 Camellia sinensis var. sinensis HOM05D000358 ORTHO05D009346 4.7e-32 141.7 144 55.6
Manes.05G077400 Manihot esculenta HOM05D000358 ORTHO05D009346 4.7e-32 141.7 148 54.7
FvH4_2g23371 Fragaria vesca HOM05D000358 ORTHO05D009346 6.1e-32 141.4 129 58.9
Sp6g02670 Schrenkiella parvula HOM05D000358 ORTHO05D009346 6.1e-32 141.4 103 65.0
CARHR251060 Cardamine hirsuta HOM05D000358 ORTHO05D009346 8.0e-32 141.0 79 82.3
BcaC04g24011 Brassica carinata HOM05D000358 ORTHO05D009346 1.0e-31 140.6 99 67.7
BcaB05g23661 Brassica carinata HOM05D000358 ORTHO05D009346 1.4e-31 140.2 106 65.1
HanXRQChr15g0466741 Helianthus annuus HOM05D000358 ORTHO05D009346 1.4e-31 140.2 117 62.4
MBI04_g20822_MAGBIO Magnolia biondii HOM05D000358 ORTHO05D009346 1.8e-31 139.8 138 55.8
GSVIVG01001163001 Vitis vinifera HOM05D000358 ORTHO05D009346 1.8e-31 139.8 138 53.6
BolC9t53153H Brassica oleracea HOM05D000358 ORTHO05D009346 2.3e-31 139.4 99 67.7
BraA09t35864Z Brassica rapa HOM05D000358 ORTHO05D009346 2.3e-31 139.4 99 67.7
Lj1A47T39 Lonicera japonica HOM05D000358 ORTHO05D009346 2.3e-31 139.4 84 76.2
RcHm_v2.0_Chr6g0290831 Rosa chinensis HOM05D000358 ORTHO05D009346 2.3e-31 139.4 129 58.9
arahy.Tifrunner.gnm1.ann1.1D6AAZ Arachis hypogaea HOM05D000358 ORTHO05D009346 3.0e-31 139.0 79 83.5
arahy.Tifrunner.gnm1.ann1.M7C8NM Arachis hypogaea HOM05D000358 ORTHO05D009346 3.0e-31 139.0 79 83.5
A09p02150 Brassica napus HOM05D000358 ORTHO05D009346 3.0e-31 139.0 99 67.7
Duzib133G0337 Durio zibethinus HOM05D000358 ORTHO05D009346 5.2e-31 138.3 149 53.7
Atru.chr5.1460 Acer truncatum HOM05D000358 ORTHO05D009346 8.9e-31 137.5 146 50.7
TWI14G1410 Tripterygium wilfordii HOM05D000358 ORTHO05D009346 8.9e-31 137.5 80 78.8
Thecc.01G276900 Theobroma cacao HOM05D000358 ORTHO05D009346 1.2e-30 137.1 150 54.7
Carub.0006s3438 Capsella rubella HOM05D000358 ORTHO05D009346 3.4e-30 135.6 106 63.2
MD11G1284000 Malus domestica HOM05D000358 ORTHO05D009346 3.4e-30 135.6 147 56.5
Lsat_1_v5_gn_9_3480 Lactuca sativa HOM05D000358 ORTHO05D009346 4.4e-30 135.2 114 63.2
Phvul.001G152500 Phaseolus vulgaris HOM05D000358 ORTHO05D009346 4.4e-30 135.2 79 82.3
Zm00001eb054110 Zea mays HOM05D000358 ORTHO05D009346 4.4e-30 135.2 90 67.8
Thhalv10029025m.g Eutrema salsugineum HOM05D000358 ORTHO05D009346 5.7e-30 134.8 117 57.3
ECA247G2961 Erigeron canadensis HOM05D000358 ORTHO05D009346 7.5e-30 134.4 109 65.1
Eucgr.K03368 Eucalyptus grandis HOM05D000358 ORTHO05D009346 1.3e-29 133.7 126 57.9
Gorai.007G137700 Gossypium raimondii HOM05D000358 ORTHO05D009346 1.3e-29 133.7 131 58.0
Nitab4.5_0005971g0010 Nicotiana tabacum HOM05D000358 ORTHO05D009346 1.3e-29 133.7 118 61.0
AL6G50280 Arabidopsis lyrata HOM05D000358 ORTHO05D009346 2.2e-29 132.9 106 62.3
CiPaw.07G090600 Carya illinoinensis HOM05D000358 ORTHO05D009346 2.2e-29 132.9 138 52.2
Dinv32921 Davidia involucrata HOM05D000358 ORTHO05D002525 2.2e-29 132.9 90 72.2
AT4G02725 Arabidopsis thaliana HOM05D000358 ORTHO05D009346 2.9e-29 132.5 106 61.3
MSTRG.12558 Avicennia marina HOM05D000358 ORTHO05D009346 2.9e-29 132.5 148 50.7
Hma1.2p1_0822F.1_g224420 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 2.9e-29 132.5 79 77.2
Prupe.8G239600 Prunus persica HOM05D000358 ORTHO05D009346 3.7e-29 132.1 80 75.0
Nitab4.5_0004318g0030 Nicotiana tabacum HOM05D000358 ORTHO05D009346 4.9e-29 131.7 98 68.4
Hma1.2p1_0822F.1_g224410 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 6.4e-29 131.3 90 71.1
Peaxi162Scf00641g00315 Petunia axillaris HOM05D000358 ORTHO05D009346 6.4e-29 131.3 145 54.5
THA.LOC104801239 Tarenaya hassleriana HOM05D000358 ORTHO05D009346 6.4e-29 131.3 79 74.7
Rhsim13G0026100 Rhododendron simsii HOM05D000358 ORTHO05D009346 8.3e-29 131.0 78 78.2
Aa31LG5G2370 Aethionema arabicum HOM05D000358 ORTHO05D009346 1.1e-28 130.6 126 54.0
Lj1g0011093 Lotus japonicus HOM05D000358 ORTHO05D009346 1.4e-28 130.2 123 56.9
Sed0015724 Sechium edule HOM05D000358 ORTHO05D009346 1.4e-28 130.2 140 51.4
PGSC0003DMG400019331 Solanum tuberosum HOM05D000358 ORTHO05D009346 1.4e-28 130.2 112 61.6
TPR.G35683 Trifolium pratense HOM05D000358 ORTHO05D009346 1.4e-28 130.2 134 53.7
Gohir.D11G128700 Gossypium hirsutum HOM05D000358 ORTHO05D009346 1.8e-28 129.8 120 59.2
Psat3g063840 Pisum sativum HOM05D000358 ORTHO05D009346 1.8e-28 129.8 147 50.3
Migut.N02045 Erythranthe guttata HOM05D000358 ORTHO05D009346 2.4e-28 129.4 92 68.5
Medtr7g095090 Medicago truncatula HOM05D000358 ORTHO05D009346 5.4e-28 128.3 149 51.0
C09p02250 Brassica napus HOM05D000358 ORTHO05D009346 1.2e-27 127.1 123 54.5
Gohir.A11G123500 Gossypium hirsutum HOM05D000358 ORTHO05D009346 1.2e-27 127.1 120 56.7
Potri.005G210700 Populus trichocarpa HOM05D000358 ORTHO05D009346 1.2e-27 127.1 151 51.7
PGR044G2401 Punica granatum HOM05D000358 ORTHO05D009346 1.6e-27 126.7 90 70.0
SGA_v2.0_scaffold81G26022 Striga asiatica HOM05D000358 ORTHO05D009346 2.7e-27 125.9 137 54.0
SalBow6G4489 Salvia bowleyana HOM05D000358 ORTHO05D009346 4.6e-27 125.2 79 72.2
Solyc09g065300.4 Solanum lycopersicum HOM05D000358 ORTHO05D009346 4.6e-27 125.2 145 52.4
Sopen09g027050 Solanum pennellii HOM05D000358 ORTHO05D009346 7.8e-27 124.4 145 52.4
ATR0332G065 Amborella trichopoda HOM05D000358 ORTHO05D009346 1.0e-26 124.0 120 53.3
Aqoxy2G03373 Aquilegia oxysepala HOM05D000358 ORTHO05D009346 1.0e-26 124.0 140 48.6
CsaV3_6G037210 Cucumis sativus L. HOM05D000358 ORTHO05D009346 1.3e-26 123.6 102 60.8
Actinidia09124 Actinidia chinensis HOM05D000358 ORTHO05D009346 1.7e-26 123.2 81 71.6
Haze_04693 Corylus avellana HOM05D000358 ORTHO05D009346 2.3e-26 122.9 137 48.2
Os03g0701300 Oryza sativa ssp. japonica HOM05D000358 ORTHO05D009346 1.1e-25 120.6 75 76.0
Atru.BG.13.p Acer truncatum HOM05D000358 ORTHO05D009346 7.3e-25 117.9 107 56.1
Cc01_g19380 Coffea canephora HOM05D000358 ORTHO05D009346 9.5e-25 117.5 90 65.6
COL.COLO4_09074 Corchorus olitorius HOM05D000358 ORTHO05D009346 1.2e-24 117.1 140 48.6
VMungo1383G1528 Vigna mungo HOM05D000358 ORTHO05D009346 1.2e-24 117.1 137 52.6
HPP92_009591 Vanilla planifolia HOM05D002842 ORTHO05D003177 1.6e-24 116.7 117 51.3
Lalb_Chr01g0020121 Lupinus albus HOM05D000358 ORTHO05D009346 4.7e-24 115.2 72 73.6
AagrBONN_evm.TU.Sc2ySwM_362.2722 Anthoceros agrestis HOM05D000358 ORTHO05D009346 1.3e-21 107.1 94 56.4
SMO180G0003 Selaginella moellendorffii HOM05D000358 ORTHO05D009346 6.4e-21 104.8 75 60.0
CDE02G2742 Ceratophyllum demersum HOM05D006420 ORTHO05D008009 8.3e-21 104.4 89 58.4
Pp3c26_14500 Physcomitrium patens HOM05D000358 ORTHO05D009346 8.3e-21 104.4 114 43.9
Mapoly0004s0031 Marchantia polymorpha HOM05D000358 ORTHO05D009346 1.4e-20 103.6 99 51.5
SMO340G0322 Selaginella moellendorffii HOM05D000104 ORTHO05D004059 7.0e-20 101.3 115 43.5
ClCG07G000330 Citrullus lanatus HOM05D000358 ORTHO05D009346 2.1e-16 89.7 140 42.1
Ah.11g050550 Amaranthus hybridus HOM05D000358 ORTHO05D009346 4.9e-13 78.6 96 50.0
Eucgr.L00778 Eucalyptus grandis HOM05D000358 ORTHO05D009346 1.9e-12 76.6 50 72.0
Oeu029468.1 Olea europaea HOM05D000358 ORTHO05D009346 5.1e-10 68.6 97 44.3
QL12p021343 Quercus lobata HOM05D000358 ORTHO05D009346 8.6e-10 67.8 85 48.2
Nn1g02275 Nelumbo nucifera HOM05D000358 ORTHO05D009346 1.6e-08 63.5 126 38.1
unitig_899.g15068 Utricularia gibba HOM05D000454 ORTHO05D000591 2.1e-08 63.2 47 57.4
MELO3C014393.2 Cucumis melo HOM05D000358 ORTHO05D009346 1.1e-07 60.8 59 52.5
Eucgr.C01960 Eucalyptus grandis HOM05D000358 ORTHO05D009346 7.6e-06 54.7 37 70.3


User provided reference genes

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