Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc17g0001190 Simmondsia chinensis HOM05D002989 ORTHO05D003218 3.2e-133 478.4 238 100.0
EL10Ac5g10497 Beta vulgaris HOM05D002989 ORTHO05D003218 1.7e-70 270.0 207 66.7
Ah.11g050240 Amaranthus hybridus HOM05D002989 ORTHO05D003218 1.1e-61 240.7 217 59.0
Nitab4.5_0000459g0030 Nicotiana tabacum HOM05D002989 ORTHO05D003218 3.6e-60 235.7 204 58.8
Ciclev10018605m.g Citrus clementina HOM05D002989 ORTHO05D003218 8.0e-60 234.6 221 58.4
TAR365G0943 Trochodendron aralioides HOM05D002989 ORTHO05D003218 1.4e-59 233.8 200 62.0
CAN.G380.7 Capsicum annuum HOM05D002989 ORTHO05D003218 8.9e-59 231.1 198 58.1
Sabra05G0164000 Salix brachista HOM05D002989 ORTHO05D003218 1.7e-57 226.9 234 55.6
Rhsim01G0272200 Rhododendron simsii HOM05D002989 ORTHO05D003218 2.9e-57 226.1 211 56.9
PSO832G1612 Papaver somniferum HOM05D002989 ORTHO05D003218 3.7e-57 225.7 218 56.0
Manes.05G081600 Manihot esculenta HOM05D002989 ORTHO05D003218 6.4e-57 224.9 216 58.3
Glyma.02G144500 Glycine max HOM05D002989 ORTHO05D003218 1.4e-56 223.8 212 56.6
Sopen09g027400 Solanum pennellii HOM05D002989 ORTHO05D003218 1.4e-56 223.8 201 55.7
GSVIVG01003117001 Vitis vinifera HOM05D002989 ORTHO05D003218 1.4e-56 223.8 196 62.2
CSS0014533 Camellia sinensis var. sinensis HOM05D002989 ORTHO05D003218 1.9e-56 223.4 202 59.9
Potri.005G214650 Populus trichocarpa HOM05D002989 ORTHO05D003218 1.9e-56 223.4 198 61.6
MELO3C014325.2 Cucumis melo HOM05D002989 ORTHO05D003218 3.2e-56 222.6 197 58.9
Actinidia24922 Actinidia chinensis HOM05D001150 ORTHO05D003218 5.4e-56 221.9 192 59.9
CsaV3_2G013890 Cucumis sativus L. HOM05D002989 ORTHO05D003218 5.4e-56 221.9 197 57.9
Hund02863 Selenicereus undatus HOM05D002989 ORTHO05D003218 5.4e-56 221.9 181 63.5
Cc01_g19030 Coffea canephora HOM05D002989 ORTHO05D003218 7.0e-56 221.5 202 57.4
Lsat_1_v5_gn_9_7440 Lactuca sativa HOM05D002989 ORTHO05D003218 9.2e-56 221.1 202 56.9
Lj5g0006345 Lotus japonicus HOM05D002989 ORTHO05D003218 9.2e-56 221.1 220 55.0
RcHm_v2.0_Chr6g0290051 Rosa chinensis HOM05D002989 ORTHO05D003218 6.0e-55 218.4 211 55.0
HanXRQChr09g0240651 Helianthus annuus HOM05D002989 ORTHO05D003218 1.0e-54 217.6 206 54.9
Oeu025764.3 Olea europaea HOM05D002989 ORTHO05D003218 1.3e-54 217.2 213 54.9
Prupe.8G235000 Prunus persica HOM05D002989 ORTHO05D003218 1.3e-54 217.2 201 56.2
Atru.chr5.1517 Acer truncatum HOM05D002989 ORTHO05D003218 1.7e-54 216.9 211 56.9
QL12p042063 Quercus lobata HOM05D002989 ORTHO05D003218 1.7e-54 216.9 217 55.8
Nitab4.5_0003775g0010 Nicotiana tabacum HOM05D002989 ORTHO05D003218 3.0e-54 216.1 245 49.0
ECA247G3236 Erigeron canadensis HOM05D002989 ORTHO05D003218 3.9e-54 215.7 198 56.6
MD03G1258500 Malus domestica HOM05D002989 ORTHO05D003218 3.9e-54 215.7 207 56.0
FAN20G1777 Fragaria x ananassa HOM05D002989 ORTHO05D003218 5.0e-54 215.3 200 54.5
VMungo0720G0840 Vigna mungo HOM05D002989 ORTHO05D003218 5.0e-54 215.3 193 57.0
FAN27G2040 Fragaria x ananassa HOM05D002989 ORTHO05D003218 1.1e-53 214.2 200 54.5
HanXRQChr10g0281961 Helianthus annuus HOM05D002989 ORTHO05D003218 1.1e-53 214.2 198 54.0
Nn1g02454 Nelumbo nucifera HOM05D002989 ORTHO05D003218 1.5e-53 213.8 219 54.8
ClCG07G000490 Citrullus lanatus HOM05D002989 ORTHO05D003218 2.5e-53 213.0 234 51.3
Phvul.007G174700 Phaseolus vulgaris HOM05D002989 ORTHO05D003218 4.3e-53 212.2 204 54.9
HanXRQChr09g0240611 Helianthus annuus HOM05D002989 ORTHO05D003218 5.6e-53 211.8 199 55.3
PGR044G2467 Punica granatum HOM05D002989 ORTHO05D003218 9.5e-53 211.1 209 54.1
Duzib211G0299 Durio zibethinus HOM05D002989 ORTHO05D003218 1.6e-52 210.3 214 52.8
FAN15G0470 Fragaria x ananassa HOM05D002989 ORTHO05D003218 2.1e-52 209.9 200 53.5
Cfa006196 Carpinus fangiana HOM05D002989 ORTHO05D003218 2.8e-52 209.5 218 53.2
TWI12G0259 Tripterygium wilfordii HOM05D002989 ORTHO05D003218 3.6e-52 209.1 212 52.8
Ca_09731_v3 Cicer arietinum L. HOM05D002989 ORTHO05D003218 4.7e-52 208.8 211 55.5
FvH4_2g23010 Fragaria vesca HOM05D002989 ORTHO05D003218 4.7e-52 208.8 212 53.8
FAN24G2837 Fragaria x ananassa HOM05D002989 ORTHO05D003218 4.7e-52 208.8 201 54.2
PGR044G1058 Punica granatum HOM05D002989 ORTHO05D003218 4.7e-52 208.8 209 53.6
Medtr1g071370 Medicago truncatula HOM05D002989 ORTHO05D003218 1.8e-51 206.8 213 53.5
Gohir.A08G045205 Gossypium hirsutum HOM05D002989 ORTHO05D003218 2.3e-51 206.5 197 56.3
CiPaw.08G108900 Carya illinoinensis HOM05D002989 ORTHO05D003218 4.0e-51 205.7 209 54.5
Haze_04646 Corylus avellana HOM05D002989 ORTHO05D003218 4.0e-51 205.7 221 52.9
Lalb_Chr21g0306351 Lupinus albus HOM05D002989 ORTHO05D003218 4.0e-51 205.7 202 53.5
MBI11_g09455_MAGBIO Magnolia biondii HOM05D002989 ORTHO05D003218 1.2e-50 204.1 198 55.1
Gorai.004G056100 Gossypium raimondii HOM05D002989 ORTHO05D003218 2.6e-50 203.0 197 55.8
SalBow4G0275 Salvia bowleyana HOM05D002989 ORTHO05D003218 2.6e-50 203.0 215 50.7
arahy.Tifrunner.gnm1.ann1.V0L3RT Arachis hypogaea HOM05D002989 ORTHO05D003218 3.4e-50 202.6 215 52.6
Thhalv10005760m.g Eutrema salsugineum HOM05D002989 ORTHO05D003218 3.4e-50 202.6 219 49.3
TPR.G25700 Trifolium pratense HOM05D002989 ORTHO05D003218 4.4e-50 202.2 181 56.9
vmacro14890 Vaccinium macrocarpon HOM05D002989 ORTHO05D003218 4.4e-50 202.2 267 45.7
Thecc.01G272000 Theobroma cacao HOM05D002989 ORTHO05D003218 5.8e-50 201.8 220 49.5
arahy.Tifrunner.gnm1.ann1.T1HKRS Arachis hypogaea HOM05D002989 ORTHO05D003218 7.5e-50 201.4 231 49.8
CARHR291630 Cardamine hirsuta HOM05D002989 ORTHO05D003218 1.3e-49 200.7 203 54.7
SGA_v2.0_scaffold1G00532 Striga asiatica HOM05D002989 ORTHO05D003218 2.2e-49 199.9 219 49.3
CANSAT25G2944 Cannabis sativa HOM05D002989 ORTHO05D003218 3.7e-49 199.1 226 51.8
AUR62032285 Chenopodium quinoa HOM05D002989 ORTHO05D003218 3.7e-49 199.1 155 66.5
MSTRG.18266 Avicennia marina HOM05D002989 ORTHO05D003218 6.4e-49 198.4 196 53.6
Migut.D00359 Erythranthe guttata HOM05D002989 ORTHO05D003218 6.4e-49 198.4 222 50.0
Lj2C1165G7 Lonicera japonica HOM05D002989 ORTHO05D003218 6.4e-49 198.4 188 56.4
TAR362G0937 Trochodendron aralioides HOM05D002989 ORTHO05D003218 1.1e-48 197.6 187 58.3
Sp5g00200 Schrenkiella parvula HOM05D002989 ORTHO05D003218 1.4e-48 197.2 207 55.1
Sed0003144 Sechium edule HOM05D002989 ORTHO05D003218 1.4e-48 197.2 212 49.5
AL5G46190 Arabidopsis lyrata HOM05D002989 ORTHO05D003218 4.1e-48 195.7 210 52.4
AT3G63340 Arabidopsis thaliana HOM05D002989 ORTHO05D003218 6.0e-47 191.8 211 51.7
THA.LOC104809895 Tarenaya hassleriana HOM05D002989 ORTHO05D003218 7.8e-47 191.4 199 52.3
Carub.0005s2998 Capsella rubella HOM05D002989 ORTHO05D003218 1.7e-46 190.3 200 53.0
unitig_0.g140 Utricularia gibba HOM05D002989 ORTHO05D003218 2.3e-46 189.9 203 49.8
BcaB02g08065 Brassica carinata HOM05D002989 ORTHO05D003218 3.9e-46 189.1 198 54.0
Aa31LG10G17170 Aethionema arabicum HOM05D002989 ORTHO05D003218 1.9e-45 186.8 185 55.7
RcHm_v2.0_Chr3g0479641 Rosa chinensis HOM05D002989 ORTHO05D003218 2.5e-45 186.4 213 48.8
BolC4t24522H Brassica oleracea HOM05D002989 ORTHO05D003218 9.5e-45 184.5 199 53.8
A04p00100 Brassica napus HOM05D002989 ORTHO05D003218 1.2e-44 184.1 199 51.8
BraA04t15730Z Brassica rapa HOM05D002989 ORTHO05D003218 1.2e-44 184.1 199 51.8
C04p29910 Brassica napus HOM05D002989 ORTHO05D003218 1.6e-44 183.7 199 53.3
ATR0665G490 Amborella trichopoda HOM05D002989 ORTHO05D003218 2.0e-42 176.8 184 48.9
Aqoxy7G03495 Aquilegia oxysepala HOM05D002989 ORTHO05D003218 4.4e-42 175.6 193 51.3
TAR365G0266 Trochodendron aralioides HOM05D002989 ORTHO05D003218 4.4e-42 175.6 211 46.4
MD00G1147300 Malus domestica HOM05D002989 ORTHO05D003218 2.2e-41 173.3 219 51.6
MD08G1204000 Malus domestica HOM05D002989 ORTHO05D003218 2.2e-41 173.3 219 51.6
COL.COLO4_09194 Corchorus olitorius HOM05D002989 ORTHO05D003218 8.3e-41 171.4 197 51.3
AL5G46180 Arabidopsis lyrata HOM05D002989 ORTHO05D003218 1.4e-40 170.6 202 49.5
MD00G1147800 Malus domestica HOM05D002989 ORTHO05D003218 5.4e-40 168.7 212 49.5
QL12p042129 Quercus lobata HOM05D000097 ORTHO05D003218 7.1e-40 168.3 152 58.6
Sp5g00210 Schrenkiella parvula HOM05D002989 ORTHO05D003218 2.7e-39 166.4 208 47.1
Os11g0586100 Oryza sativa ssp. japonica HOM05D002989 ORTHO05D003218 2.3e-38 163.3 228 41.7
Cpa.g.sc52.115 Carica papaya HOM05D002989 ORTHO05D003218 3.1e-35 152.9 122 63.9
Actinidia21825 Actinidia chinensis HOM05D002989 ORTHO05D003218 3.8e-33 146.0 201 39.8
Lsat_1_v5_gn_9_7521 Lactuca sativa HOM05D002989 ORTHO05D003218 6.4e-33 145.2 201 43.8
vmacro02612 Vaccinium macrocarpon HOM05D002989 ORTHO05D003218 9.2e-32 141.4 220 39.5
Cfa006195 Carpinus fangiana HOM05D002989 ORTHO05D003218 6.0e-31 138.7 206 40.3
GSVIVG01003115001 Vitis vinifera HOM05D002989 ORTHO05D003218 1.3e-30 137.5 203 41.9
Rhsim13G0028600 Rhododendron simsii HOM05D002989 ORTHO05D003218 1.1e-29 134.4 218 36.2
CSS0037436 Camellia sinensis var. sinensis HOM05D002989 ORTHO05D003218 5.6e-29 132.1 213 38.5
Migut.D00361 Erythranthe guttata HOM05D002989 ORTHO05D003218 1.6e-28 130.6 217 36.4
Sopen06g035490 Solanum pennellii HOM05D002989 ORTHO05D003218 3.6e-28 129.4 192 39.6
Lj2C1165T16 Lonicera japonica HOM05D002989 ORTHO05D003218 8.1e-28 128.3 207 41.1
Nitab4.5_0013316g0010 Nicotiana tabacum HOM05D002989 ORTHO05D003218 2.4e-27 126.7 190 41.1
DCAR_012504 Daucus carota HOM05D002989 ORTHO05D003218 3.1e-27 126.3 189 42.3
Nitab4.5_0001044g0020 Nicotiana tabacum HOM05D002989 ORTHO05D003218 3.1e-27 126.3 208 39.4
Haze_04649 Corylus avellana HOM05D002989 ORTHO05D003218 9.0e-27 124.8 122 50.8
Potri.005G214500 Populus trichocarpa HOM05D002989 ORTHO05D003218 1.5e-26 124.0 204 40.2
Actinidia19960 Actinidia chinensis HOM05D002989 ORTHO05D003218 3.4e-26 122.9 211 38.9
Oeu052360.1 Olea europaea HOM05D002989 ORTHO05D003218 3.4e-26 122.9 130 51.5
TWI60G1134 Tripterygium wilfordii HOM05D002989 ORTHO05D003218 3.4e-26 122.9 183 41.0
QL12p042043 Quercus lobata HOM05D002989 ORTHO05D003218 9.9e-26 121.3 210 37.6
AUR62032286 Chenopodium quinoa HOM05D002989 ORTHO05D003218 1.7e-25 120.6 224 37.1
SalBow4G0873 Salvia bowleyana HOM05D002989 ORTHO05D003218 2.2e-25 120.2 210 39.0
Manes.01G204300 Manihot esculenta HOM05D002989 ORTHO05D003218 3.8e-25 119.4 236 36.0
MSTRG.21529 Avicennia marina HOM05D002989 ORTHO05D003218 6.4e-25 118.6 193 36.8
vmacro02611 Vaccinium macrocarpon HOM05D002989 ORTHO05D003218 6.4e-25 118.6 235 36.6
MD00G1147600 Malus domestica HOM05D002989 ORTHO05D003218 1.4e-24 117.5 152 47.4
TWI60G0894 Tripterygium wilfordii HOM05D002989 ORTHO05D003218 3.2e-24 116.3 189 39.7
Atru.chr5.1516 Acer truncatum HOM05D002989 ORTHO05D003218 4.2e-24 115.9 208 36.5
Rhsim01G0068400 Rhododendron simsii HOM05D002989 ORTHO05D003218 4.2e-24 115.9 208 37.0
HPP92_020349 Vanilla planifolia HOM05D002989 ORTHO05D003218 4.2e-24 115.9 119 50.4
Sabra05G0163900 Salix brachista HOM05D002989 ORTHO05D003218 7.1e-24 115.2 163 41.1
PGSC0003DMG401019311 Solanum tuberosum HOM05D002989 ORTHO05D003218 1.2e-23 114.4 80 67.5
Cc01_g19040 Coffea canephora HOM05D002989 ORTHO05D003218 2.7e-23 113.2 190 39.5
unitig_0.g137 Utricularia gibba HOM05D002989 ORTHO05D003218 1.7e-22 110.5 209 37.3
PGSC0003DMG402020059 Solanum tuberosum HOM05D002989 ORTHO05D003218 5.1e-22 109.0 105 51.4
QL05p073831 Quercus lobata HOM05D002989 ORTHO05D003218 6.6e-22 108.6 207 34.8
HanXRQChr09g0240681 Helianthus annuus HOM05D002989 ORTHO05D003218 1.1e-21 107.8 121 49.6
HanXRQChr09g0240711 Helianthus annuus HOM05D002989 ORTHO05D003218 1.1e-21 107.8 127 49.6
Duzib114G0118 Durio zibethinus HOM05D002989 ORTHO05D003218 1.9e-21 107.1 191 37.2
Ciclev10023714m.g Citrus clementina HOM05D002989 ORTHO05D003218 3.3e-21 106.3 110 54.5
Dinv32887 Davidia involucrata HOM05D002989 ORTHO05D003218 3.3e-21 106.3 111 53.2
DCAR_012506 Daucus carota HOM05D002989 ORTHO05D003218 7.3e-21 105.1 82 62.2
EL10Ac5g10495 Beta vulgaris HOM05D002989 ORTHO05D003218 1.6e-20 104.0 86 64.0
QL12p042048 Quercus lobata HOM05D002989 ORTHO05D003218 1.4e-19 100.9 165 41.2
Zm00001eb114480 Zea mays HOM05D002989 ORTHO05D003218 1.2e-18 97.8 142 40.8
QL05p073579 Quercus lobata HOM05D002989 ORTHO05D003218 1.3e-17 94.4 147 38.1
Nitab4.5_0004086g0050 Nicotiana tabacum HOM05D002989 ORTHO05D003218 4.9e-17 92.4 109 49.5
HanXRQChr11g0338821 Helianthus annuus HOM05D002989 ORTHO05D003218 1.9e-16 90.5 199 34.2
Lsat_1_v5_gn_5_185781 Lactuca sativa HOM05D002989 ORTHO05D003218 7.1e-16 88.6 171 35.7
Nitab4.5_0002266g0120 Nicotiana tabacum HOM05D002989 ORTHO05D003218 7.1e-16 88.6 109 47.7
Hund02862 Selenicereus undatus HOM05D002989 ORTHO05D003218 1.2e-15 87.8 228 30.3
THA.LOC104813803 Tarenaya hassleriana HOM05D002989 ORTHO05D003218 3.5e-15 86.3 125 40.0
Psat0s4150g0200 Pisum sativum HOM05D002989 ORTHO05D003218 4.6e-15 85.9 64 65.6
Peaxi162Scf00230g00019 Petunia axillaris HOM05D002989 ORTHO05D003218 7.9e-15 85.1 95 48.4
Nitab4.5_0002380g0050 Nicotiana tabacum HOM05D002989 ORTHO05D003218 3.3e-13 79.7 108 42.6
PGSC0003DMG400030387 Solanum tuberosum HOM05D002989 ORTHO05D003218 5.6e-13 79.0 111 41.4
Gohir.D08G055500 Gossypium hirsutum HOM05D002989 ORTHO05D003218 3.7e-12 76.3 98 50.0
PGR019G0005 Punica granatum HOM05D002989 ORTHO05D003218 1.4e-11 74.3 96 45.8
SGA_v2.0_scaffold1G00529 Striga asiatica HOM05D002989 ORTHO05D003218 1.2e-10 71.2 91 45.1
Nitab4.5_0000172g2190 Nicotiana tabacum HOM05D002989 ORTHO05D003218 2.6e-10 70.1 79 48.1
CAN.G337.25 Capsicum annuum HOM05D002989 ORTHO05D003218 4.5e-10 69.3 67 49.3
CAN.G771.8 Capsicum annuum HOM05D002989 ORTHO05D003218 2.2e-09 67.0 63 49.2
CAN.G337.27 Capsicum annuum HOM05D002989 ORTHO05D003218 2.9e-09 66.6 157 32.5
CAN.G771.9 Capsicum annuum HOM05D002989 ORTHO05D003218 6.4e-09 65.5 113 41.6
Solyc06g084110.1 Solanum lycopersicum HOM05D002989 ORTHO05D003218 2.5e-08 63.5 65 47.7
Pp3c16_17820 Physcomitrium patens HOM05D002989 ORTHO05D003218 1.2e-07 61.2 72 44.4
AagrBONN_evm.TU.Sc2ySwM_117.2433 Anthoceros agrestis HOM05D002989 ORTHO05D003218 1.6e-07 60.8 129 35.7
Rhsim13G0147500 Rhododendron simsii HOM05D002989 ORTHO05D003218 1.6e-07 60.8 108 37.0
Mapoly0019s0132 Marchantia polymorpha HOM05D002989 ORTHO05D003218 3.5e-07 59.7 109 30.3
CDE05G1038 Ceratophyllum demersum HOM05D003967 ORTHO05D004531 1.8e-06 57.4 36 69.4
SEGI_15483 Sequoiadendron giganteum HOM05D017310 ORTHO05D003218 2.3e-06 57.0 164 29.3
Peaxi162Scf00288g01310 Petunia axillaris HOM05D002989 ORTHO05D003218 3.9e-06 56.2 70 44.3


User provided reference genes

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