Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc17g0000100 Simmondsia chinensis HOM05D006333 ORTHO05D007799 6.9e-122 440.7 224 100.0
Hund24376 Selenicereus undatus HOM05D006333 ORTHO05D007799 1.7e-96 356.3 224 79.9
Hma1.2p1_0044F.1_g026090 Hydrangea macrophylla HOM05D006333 ORTHO05D007799 2.3e-93 345.9 223 76.2
Lj3A849G43 Lonicera japonica HOM05D006333 ORTHO05D007799 3.0e-93 345.5 224 75.0
EL10Ac9g22952 Beta vulgaris HOM05D006333 ORTHO05D007799 5.7e-92 341.3 222 75.2
Dinv17616 Davidia involucrata HOM05D006333 ORTHO05D007799 1.3e-91 340.1 243 71.2
CSS0049289 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 2.2e-91 339.3 224 75.0
Ciclev10032700m.g Citrus clementina HOM05D006333 ORTHO05D007799 4.1e-90 335.1 218 75.7
COL.COLO4_08588 Corchorus olitorius HOM05D006333 ORTHO05D007799 4.1e-90 335.1 224 73.7
MELO3C024016.2 Cucumis melo HOM05D006333 ORTHO05D007799 5.4e-90 334.7 224 73.2
Gohir.A13G060400 Gossypium hirsutum HOM05D006333 ORTHO05D007799 5.4e-90 334.7 224 74.1
Thecc.02G159600 Theobroma cacao HOM05D006333 ORTHO05D007799 7.0e-90 334.3 224 73.7
CsaV3_3G031750 Cucumis sativus L. HOM05D006333 ORTHO05D007799 1.6e-89 333.2 224 73.2
CANSAT56G2519 Cannabis sativa HOM05D006333 ORTHO05D007799 2.7e-89 332.4 224 74.1
Sed0022709 Sechium edule HOM05D006333 ORTHO05D007799 3.5e-89 332.0 224 72.8
Gohir.D13G061500 Gossypium hirsutum HOM05D006333 ORTHO05D007799 4.5e-89 331.6 224 74.1
HanXRQChr12g0366301 Helianthus annuus HOM05D006333 ORTHO05D007799 4.5e-89 331.6 224 72.3
Duzib132G1109 Durio zibethinus HOM05D006333 ORTHO05D007799 1.0e-88 330.5 224 73.2
Nitab4.5_0008825g0020 Nicotiana tabacum HOM05D006333 ORTHO05D007799 5.0e-88 328.2 224 72.3
CiPaw.05G169800 Carya illinoinensis HOM05D006333 ORTHO05D007799 6.6e-88 327.8 224 71.9
Gorai.013G070000 Gossypium raimondii HOM05D006333 ORTHO05D007799 6.6e-88 327.8 230 72.2
RcHm_v2.0_Chr4g0446761 Rosa chinensis HOM05D006333 ORTHO05D007799 1.9e-87 326.2 221 72.9
TWI53G1586 Tripterygium wilfordii HOM05D006333 ORTHO05D007799 2.5e-87 325.9 224 71.4
GSVIVG01012055001 Vitis vinifera HOM05D006333 ORTHO05D007799 4.3e-87 325.1 207 77.3
Aa31LG7G2140 Aethionema arabicum HOM05D006333 ORTHO05D007799 7.3e-87 324.3 224 72.3
Rhsim09G0071800 Rhododendron simsii HOM05D006333 ORTHO05D007799 7.3e-87 324.3 224 72.8
FvH4_4g36970 Fragaria vesca HOM05D006333 ORTHO05D007799 8.0e-86 320.9 221 72.9
THA.LOC104808350 Tarenaya hassleriana HOM05D006333 ORTHO05D007799 8.0e-86 320.9 219 72.1
Aqoxy3G04253 Aquilegia oxysepala HOM05D006333 ORTHO05D007799 1.4e-85 320.1 222 71.2
Prupe.1G347700 Prunus persica HOM05D006333 ORTHO05D007799 1.8e-85 319.7 224 72.8
Sopen02g004090 Solanum pennellii HOM05D006333 ORTHO05D007799 1.8e-85 319.7 222 70.7
Thhalv10008690m.g Eutrema salsugineum HOM05D006333 ORTHO05D007799 2.3e-85 319.3 222 72.5
PGR044G2499 Punica granatum HOM05D006333 ORTHO05D007799 3.0e-85 318.9 219 73.1
FAN07G1904 Fragaria x ananassa HOM05D006333 ORTHO05D007799 4.0e-85 318.5 221 72.4
Lsat_1_v5_gn_8_33120 Lactuca sativa HOM05D006333 ORTHO05D007799 4.0e-85 318.5 228 70.6
Nn5g28807 Nelumbo nucifera HOM05D006333 ORTHO05D007799 4.0e-85 318.5 218 71.6
Solyc02g014720.4 Solanum lycopersicum HOM05D006333 ORTHO05D007799 5.2e-85 318.2 224 70.1
Eucgr.J00869 Eucalyptus grandis HOM05D006333 ORTHO05D007799 1.2e-84 317.0 221 71.0
Manes.04G057700 Manihot esculenta HOM05D006333 ORTHO05D007799 1.2e-84 317.0 224 68.8
PSO782G2700 Papaver somniferum HOM05D006333 ORTHO05D007799 1.2e-84 317.0 218 72.5
AT1G17330 Arabidopsis thaliana HOM05D006333 ORTHO05D007799 2.0e-84 316.2 220 70.9
Potri.007G072000 Populus trichocarpa HOM05D006333 ORTHO05D007799 2.0e-84 316.2 219 73.1
MD13G1004800 Malus domestica HOM05D006333 ORTHO05D007799 2.6e-84 315.8 214 73.8
CARHR017920 Cardamine hirsuta HOM05D006333 ORTHO05D007799 3.4e-84 315.5 219 72.6
MBI06_g42293_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 3.4e-84 315.5 222 73.9
Nitab4.5_0003092g0070 Nicotiana tabacum HOM05D006333 ORTHO05D007799 3.4e-84 315.5 212 73.1
Psat7g233400 Pisum sativum HOM05D006333 ORTHO05D007799 3.4e-84 315.5 221 70.6
CAN.G1011.5 Capsicum annuum HOM05D006333 ORTHO05D007799 4.4e-84 315.1 220 70.5
Medtr4g023480 Medicago truncatula HOM05D006333 ORTHO05D007799 4.4e-84 315.1 224 69.6
AL1G29580 Arabidopsis lyrata HOM05D006333 ORTHO05D007799 1.7e-83 313.2 220 70.5
Atru.chr11.1164 Acer truncatum HOM05D006333 ORTHO05D007799 3.7e-83 312.0 220 70.5
Cfa008751 Carpinus fangiana HOM05D006333 ORTHO05D007799 4.9e-83 311.6 224 70.5
Lj3g0001632 Lotus japonicus HOM05D006333 ORTHO05D007799 1.1e-82 310.5 219 68.0
MSTRG.11948 Avicennia marina HOM05D006333 ORTHO05D007799 1.4e-82 310.1 224 68.8
ECA233G4371 Erigeron canadensis HOM05D006333 ORTHO05D007799 1.4e-82 310.1 227 68.3
BcaC05g25649 Brassica carinata HOM05D006333 ORTHO05D007799 1.8e-82 309.7 224 70.5
BolC5t30276H Brassica oleracea HOM05D006333 ORTHO05D007799 1.8e-82 309.7 224 70.5
Phvul.011G028900 Phaseolus vulgaris HOM05D006333 ORTHO05D007799 2.4e-82 309.3 222 68.9
Prupe.1G347900 Prunus persica HOM05D006333 ORTHO05D007799 2.4e-82 309.3 224 70.5
C05p15710 Brassica napus HOM05D006333 ORTHO05D007799 5.4e-82 308.1 224 70.1
Sp1g15450 Schrenkiella parvula HOM05D006333 ORTHO05D007799 9.2e-82 307.4 217 71.4
unitig_32.g11605 Utricularia gibba HOM05D006333 ORTHO05D007799 9.2e-82 307.4 224 67.0
Migut.A00709 Erythranthe guttata HOM05D006333 ORTHO05D007799 4.6e-81 305.1 224 67.9
FAN17G3063 Fragaria x ananassa HOM05D006333 ORTHO05D007799 5.9e-81 304.7 245 65.3
VMungo1127G0165 Vigna mungo HOM05D006333 ORTHO05D007799 7.8e-81 304.3 214 70.1
Ca_19901_v3 Cicer arietinum L. HOM05D006333 ORTHO05D007799 2.3e-80 302.8 218 68.8
Glyma.12G026000 Glycine max HOM05D006333 ORTHO05D007799 2.3e-80 302.8 214 69.2
ATR0618G379 Amborella trichopoda HOM05D006333 ORTHO05D007799 8.6e-80 300.8 221 69.2
CSS0015547 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 8.6e-80 300.8 224 68.8
Carub.0001s1708 Capsella rubella HOM05D006333 ORTHO05D007799 4.3e-79 298.5 221 68.3
BraA06t24479Z Brassica rapa HOM05D006333 ORTHO05D007799 7.3e-79 297.7 224 68.8
A06p13260 Brassica napus HOM05D006333 ORTHO05D007799 1.2e-78 297.0 217 70.0
BcaB07g34033 Brassica carinata HOM05D006333 ORTHO05D007799 2.8e-78 295.8 221 69.2
Cc11_g02420 Coffea canephora HOM05D006333 ORTHO05D007799 1.4e-77 293.5 222 67.6
FAN12G1853 Fragaria x ananassa HOM05D006333 ORTHO05D007799 4.4e-76 288.5 222 67.1
ClCG10G012010 Citrullus lanatus HOM05D006333 ORTHO05D007799 5.8e-76 288.1 207 70.0
AUR62017701 Chenopodium quinoa HOM05D006333 ORTHO05D007799 2.9e-75 285.8 219 66.7
DCAR_008496 Daucus carota HOM05D003141 ORTHO05D003633 3.7e-75 285.4 195 73.8
Peaxi162Scf00334g00421 Petunia axillaris HOM05D006333 ORTHO05D007799 8.3e-75 284.3 199 71.9
SGA_v2.0_scaffold146G36264 Striga asiatica HOM05D006333 ORTHO05D007799 8.3e-75 284.3 260 59.2
Atru.chr11.2675 Acer truncatum HOM05D006333 ORTHO05D007799 1.4e-74 283.5 215 66.0
Atru.chr11.2676 Acer truncatum HOM05D006333 ORTHO05D007799 5.4e-74 281.6 215 66.0
Sabra07G0060700 Salix brachista HOM05D006333 ORTHO05D007799 5.4e-74 281.6 260 59.2
PSO063G3232 Papaver somniferum HOM05D006333 ORTHO05D007799 9.2e-74 280.8 246 60.6
TPR.G9857 Trifolium pratense HOM05D006333 ORTHO05D007799 1.6e-73 280.0 193 69.9
Ah.01g001500 Amaranthus hybridus HOM05D006333 ORTHO05D007799 3.5e-73 278.9 178 76.4
Eucgr.J00870 Eucalyptus grandis HOM05D006333 ORTHO05D007799 1.5e-71 273.5 211 66.4
HPP92_008575 Vanilla planifolia HOM05D006333 ORTHO05D007799 1.2e-70 270.4 225 63.6
Os10g0486000 Oryza sativa ssp. japonica HOM05D006333 ORTHO05D007799 2.1e-70 269.6 220 61.8
AUR62032988 Chenopodium quinoa HOM05D006333 ORTHO05D007799 1.4e-69 266.9 207 66.2
Actinidia11766 Actinidia chinensis HOM05D006333 ORTHO05D007799 3.4e-68 262.3 224 62.5
arahy.Tifrunner.gnm1.ann1.A0JP3J Arachis hypogaea HOM05D006333 ORTHO05D007799 1.7e-67 260.0 233 60.5
arahy.Tifrunner.gnm1.ann1.N7V6FU Arachis hypogaea HOM05D006333 ORTHO05D007799 1.7e-67 260.0 248 57.7
Lalb_Chr01g0001411 Lupinus albus HOM05D006333 ORTHO05D007799 3.2e-66 255.8 219 59.8
SMO116G0442 Selaginella moellendorffii HOM05D006333 ORTHO05D007799 4.4e-60 235.3 217 58.5
SalBow7G0482 Salvia bowleyana HOM05D006333 ORTHO05D007799 4.1e-58 228.8 273 49.8
Pp3c7_23360 Physcomitrium patens HOM05D006333 ORTHO05D007799 3.9e-56 222.2 217 54.8
CDE02G3779 Ceratophyllum demersum HOM05D006333 ORTHO05D007799 1.1e-55 220.7 208 56.7
SGA_v2.0_scaffold173G39125 Striga asiatica HOM05D006333 ORTHO05D007799 5.6e-55 218.4 157 66.9
Haze_11767 Corylus avellana HOM05D006333 ORTHO05D007799 4.7e-54 215.3 195 60.0
TAR629G0175 Trochodendron aralioides HOM05D006333 ORTHO05D007799 2.4e-53 213.0 153 68.6
Cpa.g.sc0.135 Carica papaya HOM05D006333 ORTHO05D007799 1.2e-52 210.7 153 67.3
Cre05.g234647 Chlamydomonas reinhardtii HOM05D006333 ORTHO05D007799 1.6e-49 200.3 227 50.2
Actinidia13050 Actinidia chinensis HOM05D006333 ORTHO05D007799 6.9e-45 184.9 200 55.0
MCO07G572 Micromonas commoda HOM05D006333 ORTHO05D007799 9.0e-45 184.5 221 47.5
Zm00001eb045350 Zea mays HOM05D006333 ORTHO05D007799 5.8e-44 181.8 143 60.8
vmacro16037 Vaccinium macrocarpon HOM05D006333 ORTHO05D007799 1.3e-43 180.6 160 59.4
PRCOL_00000482 Prasinoderma coloniale HOM05D006333 ORTHO05D007799 3.9e-40 169.1 225 44.9
Mapoly0006s0058 Marchantia polymorpha HOM05D006333 ORTHO05D007799 4.3e-39 165.6 151 55.0
CBR_g5629 Chara braunii HOM05D006333 ORTHO05D007799 1.9e-34 150.2 384 32.0
SalBow1G5083 Salvia bowleyana HOM05D006333 ORTHO05D007799 1.1e-31 141.0 122 59.0
Ah.05g173900 Amaranthus hybridus HOM05D006333 ORTHO05D007799 2.0e-28 130.2 95 63.2
QL03p044200 Quercus lobata HOM05D006333 ORTHO05D007799 5.8e-28 128.6 85 68.2
Aa31sc968G10 Aethionema arabicum HOM05D006333 ORTHO05D007799 7.6e-20 101.7 151 43.7
Thecc.08G107200 Theobroma cacao HOM05D006333 ORTHO05D007799 2.9e-19 99.8 70 65.7
Cpa.g.sc0.136 Carica papaya HOM05D006333 ORTHO05D007799 1.1e-18 97.8 66 74.2
Oeu044913.1 Olea europaea HOM05D006333 ORTHO05D007799 1.2e-17 94.4 66 75.8
QL03p044193 Quercus lobata HOM05D006333 ORTHO05D007799 3.9e-16 89.4 66 68.2
SalBow1G0042 Salvia bowleyana HOM05D006333 ORTHO05D007799 1.5e-15 87.4 67 65.7
Haze_06289 Corylus avellana HOM05D006333 ORTHO05D007799 2.5e-15 86.7 51 78.4
Cfa024705 Carpinus fangiana HOM05D006333 ORTHO05D007799 1.4e-13 80.9 213 30.5
Haze_18642 Corylus avellana HOM05D006333 ORTHO05D007799 9.0e-13 78.2 51 70.6
MBI06_g42292_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 2.6e-12 76.6 53 73.6
TAR629G1621 Trochodendron aralioides HOM05D006333 ORTHO05D007799 1.3e-11 74.3 56 67.9
Cfa023716 Carpinus fangiana HOM05D006333 ORTHO05D007799 5.5e-10 68.9 91 42.9
Aa31LG4G11880 Aethionema arabicum HOM05D006333 ORTHO05D007799 8.8e-08 61.6 57 56.1
Aa31sc286G50 Aethionema arabicum HOM05D006333 ORTHO05D007799 5.7e-07 58.9 45 66.7


User provided reference genes

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