Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0011710 Simmondsia chinensis HOM05D007940 ORTHO05D010046 4.8e-51 204.1 99 100.0
Hma1.2p1_0040F.1_g025155 Hydrangea macrophylla HOM05D007940 ORTHO05D010046 3.6e-30 134.8 87 71.3
Nn7g38154 Nelumbo nucifera HOM05D007940 ORTHO05D010046 3.6e-30 134.8 88 69.3
SalBow6G6284 Salvia bowleyana HOM05D007940 ORTHO05D010046 3.0e-29 131.7 80 75.0
SalBow8G3130 Salvia bowleyana HOM05D007940 ORTHO05D010046 3.0e-29 131.7 80 75.0
Migut.M01978 Erythranthe guttata HOM05D007940 ORTHO05D010046 8.9e-29 130.2 88 69.3
Eucgr.D01043 Eucalyptus grandis HOM05D007940 ORTHO05D010046 1.5e-28 129.4 82 74.4
Solyc11g020710.2 Solanum lycopersicum HOM05D007940 ORTHO05D010046 2.6e-28 128.6 93 69.9
Sabra15G0137900 Salix brachista HOM05D007940 ORTHO05D010046 4.4e-28 127.9 81 71.6
SGA_v2.0_scaffold298G47684 Striga asiatica HOM05D007940 ORTHO05D010046 5.7e-28 127.5 84 70.2
Thecc.06G142100 Theobroma cacao HOM05D007940 ORTHO05D010046 5.7e-28 127.5 91 63.7
Sopen11g010730 Solanum pennellii HOM05D007940 ORTHO05D010046 7.5e-28 127.1 93 68.8
ClCG01G009440 Citrullus lanatus HOM05D007940 ORTHO05D010046 2.9e-27 125.2 83 71.1
Potri.015G121500 Populus trichocarpa HOM05D007940 ORTHO05D010046 2.9e-27 125.2 81 70.4
Duzib235G0199 Durio zibethinus HOM05D007940 ORTHO05D010046 3.7e-27 124.8 91 63.7
Ah.06g193510 Amaranthus hybridus HOM05D007940 ORTHO05D010046 4.9e-27 124.4 86 70.9
Manes.16G057400 Manihot esculenta HOM05D007940 ORTHO05D010046 6.4e-27 124.0 83 68.7
Oeu008726.1 Olea europaea HOM05D007940 ORTHO05D010046 1.4e-26 122.9 85 68.2
DCAR_003782 Daucus carota HOM05D007940 ORTHO05D010046 2.4e-26 122.1 80 70.0
Manes.16G056500 Manihot esculenta HOM05D007940 ORTHO05D010046 2.4e-26 122.1 83 67.5
TWI38G0312 Tripterygium wilfordii HOM05D007940 ORTHO05D010046 2.4e-26 122.1 81 66.7
Actinidia33707 Actinidia chinensis HOM05D007940 ORTHO05D010046 3.2e-26 121.7 82 68.3
Atru.chr10.309 Acer truncatum HOM05D007940 ORTHO05D010046 4.1e-26 121.3 79 68.4
QL11p017779 Quercus lobata HOM05D007940 ORTHO05D010046 4.1e-26 121.3 80 71.2
Prupe.4G111600 Prunus persica HOM05D007940 ORTHO05D010046 5.4e-26 120.9 94 61.7
Cc09_g06150 Coffea canephora HOM05D007940 ORTHO05D010046 7.0e-26 120.6 88 65.9
MELO3C021755.2 Cucumis melo HOM05D007940 ORTHO05D010046 1.6e-25 119.4 83 67.5
CSS0023427 Camellia sinensis var. sinensis HOM05D007940 ORTHO05D010046 2.7e-25 118.6 75 73.3
Aa31LG2G15120 Aethionema arabicum HOM05D007940 ORTHO05D010046 3.5e-25 118.2 79 67.1
RcHm_v2.0_Chr5g0020061 Rosa chinensis HOM05D007940 ORTHO05D010046 3.5e-25 118.2 79 68.4
Sed0008509 Sechium edule HOM05D007940 ORTHO05D010046 3.5e-25 118.2 85 62.4
EL10Ac4g10315 Beta vulgaris HOM05D007940 ORTHO05D010046 7.8e-25 117.1 74 74.3
Lsat_1_v5_gn_5_23140 Lactuca sativa HOM05D007940 ORTHO05D010046 7.8e-25 117.1 82 62.2
MD05G1252500 Malus domestica HOM05D007940 ORTHO05D010046 7.8e-25 117.1 79 69.6
AL1G49310 Arabidopsis lyrata HOM05D007940 ORTHO05D010046 1.0e-24 116.7 79 67.1
MD10G1233500 Malus domestica HOM05D007940 ORTHO05D010046 1.0e-24 116.7 82 67.1
Aqoxy3G00719 Aquilegia oxysepala HOM05D007940 ORTHO05D010046 1.7e-24 115.9 80 66.2
AT1G31175 Arabidopsis thaliana HOM05D007940 ORTHO05D010046 1.7e-24 115.9 79 67.1
BcaB07g32779 Brassica carinata HOM05D007940 ORTHO05D010046 1.7e-24 115.9 88 60.2
Cfa019394 Carpinus fangiana HOM05D007940 ORTHO05D010046 3.0e-24 115.2 82 64.6
TPR.G22024 Trifolium pratense HOM05D007940 ORTHO05D010046 3.0e-24 115.2 80 68.8
Carub.0001s2958 Capsella rubella HOM05D007940 ORTHO05D010046 3.9e-24 114.8 79 65.8
HanXRQChr04g0109371 Helianthus annuus HOM05D007940 ORTHO05D010046 5.0e-24 114.4 88 55.7
Lalb_Chr07g0188831 Lupinus albus HOM05D007940 ORTHO05D010046 5.0e-24 114.4 88 67.0
Ca_01891_v3 Cicer arietinum L. HOM05D007940 ORTHO05D010046 6.6e-24 114.0 80 67.5
A09p35060 Brassica napus HOM05D007940 ORTHO05D010046 8.6e-24 113.6 81 63.0
BraA09t39037Z Brassica rapa HOM05D007940 ORTHO05D010046 8.6e-24 113.6 81 63.0
FAN16G1222 Fragaria x ananassa HOM05D007940 ORTHO05D010046 8.6e-24 113.6 79 67.1
Psat1g156840 Pisum sativum HOM05D007940 ORTHO05D010046 8.6e-24 113.6 80 67.5
CARHR030670 Cardamine hirsuta HOM05D007940 ORTHO05D010046 1.1e-23 113.2 79 65.8
Phvul.009G252500 Phaseolus vulgaris HOM05D007940 ORTHO05D010046 1.5e-23 112.8 79 64.6
Sp1g27000 Schrenkiella parvula HOM05D007940 ORTHO05D010046 1.5e-23 112.8 79 64.6
BcaC05g27148 Brassica carinata HOM05D007940 ORTHO05D010046 1.9e-23 112.5 86 59.3
BcaC09g51575 Brassica carinata HOM05D007940 ORTHO05D010046 1.9e-23 112.5 86 59.3
BolC1t01151H Brassica oleracea HOM05D007940 ORTHO05D010046 1.9e-23 112.5 86 59.3
Thhalv10009859m.g Eutrema salsugineum HOM05D007940 ORTHO05D010046 1.9e-23 112.5 79 63.3
Glyma.15G146300 Glycine max HOM05D007940 ORTHO05D010046 7.3e-23 110.5 82 63.4
MBI02_g13338_MAGBIO Magnolia biondii HOM05D007940 ORTHO05D010046 9.5e-23 110.2 82 65.9
THA.LOC104798551 Tarenaya hassleriana HOM05D007940 ORTHO05D010046 9.5e-23 110.2 82 62.2
FAN21G0368 Fragaria x ananassa HOM05D007940 ORTHO05D010046 6.2e-22 107.5 79 65.8
Medtr2g435250 Medicago truncatula HOM05D007940 ORTHO05D010046 8.0e-22 107.1 80 62.5
Ciclev10017318m.g Citrus clementina HOM05D007940 ORTHO05D010046 5.2e-21 104.4 79 62.0
Os07g0567500 Oryza sativa ssp. japonica HOM05D007940 ORTHO05D010046 8.9e-21 103.6 83 59.0
HPP92_017565 Vanilla planifolia HOM05D007940 ORTHO05D010046 1.5e-20 102.8 80 61.2
CANSAT35G1488 Cannabis sativa HOM05D007940 ORTHO05D010046 2.0e-20 102.4 86 57.0
COL.COLO4_30989 Corchorus olitorius HOM05D007940 ORTHO05D010046 2.0e-20 102.4 93 51.6
Gohir.D05G147600 Gossypium hirsutum HOM05D007940 ORTHO05D010046 7.5e-20 100.5 91 54.9
Gohir.D05G147732 Gossypium hirsutum HOM05D007940 ORTHO05D010046 6.4e-19 97.4 91 53.8
Gorai.009G151700 Gossypium raimondii HOM05D007940 ORTHO05D010046 6.4e-19 97.4 91 53.8
Zm00001eb107160 Zea mays HOM05D007940 ORTHO05D010046 3.2e-18 95.1 83 54.2
PSO675G1966 Papaver somniferum HOM05D007940 ORTHO05D010046 5.0e-16 87.8 55 69.1
CsaV3_1G046330 Cucumis sativus L. HOM05D007940 ORTHO05D010046 8.9e-13 77.0 52 61.5
CBR_g28534 Chara braunii HOM05D007940 ORTHO05D010046 6.4e-11 70.9 87 42.5
Mapoly0019s0110 Marchantia polymorpha HOM05D007940 ORTHO05D010046 1.6e-09 66.2 82 40.2
SMO347G0336 Selaginella moellendorffii HOM05D007940 ORTHO05D010046 6.0e-09 64.3 80 40.0
TAR624G1282 Trochodendron aralioides HOM05D007940 ORTHO05D010046 3.0e-08 62.0 58 48.3


User provided reference genes

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