Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0010960 Simmondsia chinensis HOM05D009526 ORTHO05D011552 1.9e-122 442.6 228 100.0
QL11p046590 Quercus lobata HOM05D009526 ORTHO05D011552 4.1e-13 79.3 155 32.3
TWI75G0567 Tripterygium wilfordii HOM05D009526 ORTHO05D011552 3.5e-12 76.3 78 43.6
RhsimUnG0205400 Rhododendron simsii HOM05D030420 ORTHO05D011552 1.9e-10 70.5 151 29.1
C03p77390 Brassica napus HOM05D009526 ORTHO05D011552 3.3e-10 69.7 172 28.5
Ciclev10030263m.g Citrus clementina HOM05D009526 ORTHO05D011552 9.5e-10 68.2 77 39.0
BcaC01g00263 Brassica carinata HOM05D009526 ORTHO05D011552 1.6e-09 67.4 172 27.3
BolC3t19995H Brassica oleracea HOM05D009526 ORTHO05D011552 1.6e-09 67.4 172 27.9
Duzib132G0500 Durio zibethinus HOM05D009526 ORTHO05D011552 3.6e-09 66.2 158 31.0
BcaB03g12231 Brassica carinata HOM05D009526 ORTHO05D011552 8.1e-09 65.1 75 41.3
Thhalv10000606m.g Eutrema salsugineum HOM05D009526 ORTHO05D011552 1.4e-08 64.3 152 28.3
Rhsim11G0184400 Rhododendron simsii HOM05D030420 ORTHO05D011552 4.0e-08 62.8 76 36.8
A08p23950 Brassica napus HOM05D009526 ORTHO05D011552 5.2e-08 62.4 85 36.5
BraA08t34353Z Brassica rapa HOM05D009526 ORTHO05D011552 5.2e-08 62.4 85 36.5
THA.LOC104807777 Tarenaya hassleriana HOM05D009526 ORTHO05D011552 5.2e-08 62.4 113 36.3
Sp5g32610 Schrenkiella parvula HOM05D009526 ORTHO05D011552 1.2e-07 61.2 177 24.3
C08p41710 Brassica napus HOM05D009526 ORTHO05D011552 2.6e-07 60.1 80 37.5
BcaB08g34975 Brassica carinata HOM05D009526 ORTHO05D011552 5.8e-07 58.9 174 24.7
BcaC07g41164 Brassica carinata HOM05D009526 ORTHO05D011552 5.8e-07 58.9 174 24.7
Carub.0004s0028 Capsella rubella HOM05D009526 ORTHO05D011552 9.9e-07 58.2 115 25.2
AL7G10790 Arabidopsis lyrata HOM05D009526 ORTHO05D011552 1.3e-06 57.8 89 36.0
BolC8t51734H Brassica oleracea HOM05D009526 ORTHO05D011552 1.3e-06 57.8 80 36.2
AT4G38905 Arabidopsis thaliana HOM05D009526 ORTHO05D011552 1.7e-06 57.4 144 29.9
AL2G17580 Arabidopsis lyrata HOM05D009526 ORTHO05D011552 2.9e-06 56.6 164 25.6
CARHR112100 Cardamine hirsuta HOM05D009526 ORTHO05D011552 3.7e-06 56.2 170 24.7
A09p58360 Brassica napus HOM05D009526 ORTHO05D011552 6.4e-06 55.5 80 35.0
BraA09t41228Z Brassica rapa HOM05D009526 ORTHO05D011552 6.4e-06 55.5 80 35.0


User provided reference genes

Program Settings