Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0010910 Simmondsia chinensis HOM05D007094 ORTHO05D008264 2.0e-53 212.2 109 100.0
Dinv22210 Davidia involucrata HOM05D007094 ORTHO05D008264 2.6e-29 132.1 113 60.2
Ah.04g159660 Amaranthus hybridus HOM05D007094 ORTHO05D008264 6.3e-28 127.5 109 60.6
Nn7g36894 Nelumbo nucifera HOM05D007094 ORTHO05D008264 2.4e-27 125.6 114 57.9
Prupe.6G146500 Prunus persica HOM05D007094 ORTHO05D008264 2.4e-27 125.6 114 58.8
QL01p016497 Quercus lobata HOM05D007094 ORTHO05D008264 3.1e-27 125.2 115 58.3
QL01p024141 Quercus lobata HOM05D007094 ORTHO05D008264 3.1e-27 125.2 115 58.3
FvH4_3g26230 Fragaria vesca HOM05D007094 ORTHO05D008264 1.6e-26 122.9 114 57.9
FAN11G3047 Fragaria x ananassa HOM05D007094 ORTHO05D008264 1.6e-26 122.9 114 57.9
Gohir.A09G108300 Gossypium hirsutum HOM05D007094 ORTHO05D008264 1.6e-26 122.9 114 60.5
FAN25G3244 Fragaria x ananassa HOM05D007094 ORTHO05D008264 2.0e-26 122.5 114 57.0
CiPaw.14G110600 Carya illinoinensis HOM05D007094 ORTHO05D008264 4.5e-26 121.3 111 55.0
RcHm_v2.0_Chr5g0048901 Rosa chinensis HOM05D007094 ORTHO05D008264 1.0e-25 120.2 114 59.6
Glyma.14G036700 Glycine max HOM05D007094 ORTHO05D008264 2.9e-25 118.6 113 57.5
Glyma.02G277800 Glycine max HOM05D007094 ORTHO05D008264 3.8e-25 118.2 113 57.5
MD11G1174500 Malus domestica HOM05D007094 ORTHO05D008264 3.8e-25 118.2 114 56.1
PGR119G0280 Punica granatum HOM05D007094 ORTHO05D008264 3.8e-25 118.2 114 54.4
CANSAT54G2518 Cannabis sativa HOM05D007094 ORTHO05D008264 6.5e-25 117.5 114 54.4
Duzib168G1032 Durio zibethinus HOM05D007094 ORTHO05D008264 8.6e-25 117.1 115 58.3
LjContig00564g0008375 Lotus japonicus HOM05D007094 ORTHO05D008264 1.5e-24 116.3 115 56.5
Phvul.008G203100 Phaseolus vulgaris HOM05D007094 ORTHO05D008264 3.3e-24 115.2 112 55.4
Aqoxy2G00509 Aquilegia oxysepala HOM05D007094 ORTHO05D008264 5.5e-24 114.4 110 53.6
arahy.Tifrunner.gnm1.ann1.WS3KYJ Arachis hypogaea HOM05D007094 ORTHO05D008264 5.5e-24 114.4 115 53.9
EL10Ac4g10089 Beta vulgaris HOM05D007094 ORTHO05D008264 5.5e-24 114.4 112 55.4
Cpa.g.sc743.4 Carica papaya HOM05D007094 ORTHO05D008264 5.5e-24 114.4 112 56.2
Cfa003293 Carpinus fangiana HOM05D007094 ORTHO05D008264 5.5e-24 114.4 114 53.5
Haze_23270 Corylus avellana HOM05D007094 ORTHO05D008264 5.5e-24 114.4 114 52.6
Migut.D00679 Erythranthe guttata HOM05D007094 ORTHO05D008264 5.5e-24 114.4 113 51.3
Duzib170G0850 Durio zibethinus HOM05D007094 ORTHO05D008264 7.2e-24 114.0 115 58.3
Gorai.006G122200 Gossypium raimondii HOM05D007094 ORTHO05D008264 1.2e-23 113.2 115 58.3
arahy.Tifrunner.gnm1.ann1.S7BBNZ Arachis hypogaea HOM05D007094 ORTHO05D008264 1.6e-23 112.8 115 53.0
Lalb_Chr04g0249301 Lupinus albus HOM05D007094 ORTHO05D008264 1.6e-23 112.8 115 54.8
Thecc.09G254700 Theobroma cacao HOM05D007094 ORTHO05D008264 1.6e-23 112.8 115 57.4
Gohir.D09G105400 Gossypium hirsutum HOM05D007094 ORTHO05D008264 2.1e-23 112.5 115 58.3
Rhsim13G0205900 Rhododendron simsii HOM05D007094 ORTHO05D008264 2.1e-23 112.5 120 50.8
Lalb_Chr17g0347841 Lupinus albus HOM05D007094 ORTHO05D008264 2.8e-23 112.1 116 52.6
Manes.01G177900 Manihot esculenta HOM05D007094 ORTHO05D008264 2.8e-23 112.1 116 54.3
TPR.G16423 Trifolium pratense HOM05D007094 ORTHO05D008264 3.6e-23 111.7 117 53.0
TAR633G0748 Trochodendron aralioides HOM05D007094 ORTHO05D008264 6.1e-23 110.9 98 60.2
MSTRG.21340 Avicennia marina HOM05D007094 ORTHO05D008264 8.0e-23 110.5 108 54.6
Psat0s2305g0120 Pisum sativum HOM05D007094 ORTHO05D008264 1.4e-22 109.8 117 52.1
CDE04G2345 Ceratophyllum demersum HOM05D007094 ORTHO05D008264 4.0e-22 108.2 118 51.7
GSVIVG01037355001 Vitis vinifera HOM05D007094 ORTHO05D008264 4.0e-22 108.2 113 52.2
MSTRG.21339 Avicennia marina HOM05D007094 ORTHO05D008264 5.2e-22 107.8 114 51.8
Medtr5g089030 Medicago truncatula HOM05D007094 ORTHO05D008264 6.8e-22 107.5 120 50.8
MBI13_g09208_MAGBIO Magnolia biondii HOM05D007094 ORTHO05D008264 1.2e-21 106.7 113 51.3
TWI31G1326 Tripterygium wilfordii HOM05D007094 ORTHO05D008264 1.2e-21 106.7 115 53.0
Cc01_g06340 Coffea canephora HOM05D007094 ORTHO05D008264 1.5e-21 106.3 109 50.5
Actinidia06990 Actinidia chinensis HOM05D007094 ORTHO05D008264 2.6e-21 105.5 114 51.8
Atru.chr3.2855 Acer truncatum HOM05D007094 ORTHO05D008264 3.4e-21 105.1 112 51.8
Atru.chr3.2857 Acer truncatum HOM05D007094 ORTHO05D008264 3.4e-21 105.1 112 51.8
arahy.Tifrunner.gnm1.ann1.MLT6HR Arachis hypogaea HOM05D007094 ORTHO05D008264 3.4e-21 105.1 115 50.4
SGA_v2.0_scaffold29G12215 Striga asiatica HOM05D007094 ORTHO05D008264 3.4e-21 105.1 99 53.5
ATR0307G079 Amborella trichopoda HOM05D007094 ORTHO05D008264 4.4e-21 104.8 105 49.5
HPP92_015618 Vanilla planifolia HOM05D007094 ORTHO05D008264 5.7e-21 104.4 113 50.4
Duzib150G1213 Durio zibethinus HOM05D007094 ORTHO05D008264 7.5e-21 104.0 113 53.1
COL.COLO4_24933 Corchorus olitorius HOM05D007094 ORTHO05D008264 9.8e-21 103.6 114 55.3
PSO339G5619 Papaver somniferum HOM05D007094 ORTHO05D008264 9.8e-21 103.6 115 49.6
Solyc11g065080.2 Solanum lycopersicum HOM05D007094 ORTHO05D008264 9.8e-21 103.6 115 52.2
THA.LOC104811204 Tarenaya hassleriana HOM05D007094 ORTHO05D008264 1.3e-20 103.2 115 50.4
PSO384G3224 Papaver somniferum HOM05D007094 ORTHO05D008264 1.7e-20 102.8 115 48.7
FAN21G1281 Fragaria x ananassa HOM05D007094 ORTHO05D008264 2.8e-20 102.1 107 52.3
CAN.G1167.7 Capsicum annuum HOM05D007094 ORTHO05D008264 4.9e-20 101.3 114 52.6
PGSC0003DMG402031249 Solanum tuberosum HOM05D007094 ORTHO05D008264 6.3e-20 100.9 118 49.2
Ciclev10017201m.g Citrus clementina HOM05D007094 ORTHO05D008264 1.1e-19 100.1 114 49.1
Sed0011068 Sechium edule HOM05D007094 ORTHO05D008264 2.4e-19 99.0 113 50.4
Sopen11g024820 Solanum pennellii HOM05D007094 ORTHO05D008264 2.4e-19 99.0 118 48.3
A03p05490 Brassica napus HOM05D007094 ORTHO05D008264 4.1e-19 98.2 110 48.2
BraA03t09887Z Brassica rapa HOM05D007094 ORTHO05D008264 4.1e-19 98.2 110 48.2
MELO3C014546.2 Cucumis melo HOM05D007094 ORTHO05D008264 9.2e-19 97.1 98 55.1
Oeu001497.1 Olea europaea HOM05D007094 ORTHO05D008264 9.2e-19 97.1 108 51.9
unitig_52.g16873 Utricularia gibba HOM05D007094 ORTHO05D008264 1.2e-18 96.7 113 46.0
VMungo0647G0750 Vigna mungo HOM05D007094 ORTHO05D008264 1.6e-18 96.3 130 45.4
AT5G12240 Arabidopsis thaliana HOM05D007094 ORTHO05D008264 4.5e-18 94.7 111 48.6
C03p06400 Brassica napus HOM05D007094 ORTHO05D008264 5.9e-18 94.4 114 48.2
Carub.0006s1075 Capsella rubella HOM05D007094 ORTHO05D008264 1.3e-17 93.2 111 47.7
CARHR200870 Cardamine hirsuta HOM05D007094 ORTHO05D008264 1.3e-17 93.2 111 47.7
BcaB01g05415 Brassica carinata HOM05D007094 ORTHO05D008264 1.7e-17 92.8 115 48.7
ClCG02G022690 Citrullus lanatus HOM05D007094 ORTHO05D008264 2.3e-17 92.4 113 46.9
Potri.001G274400 Populus trichocarpa HOM05D007094 ORTHO05D008264 3.8e-17 91.7 107 45.8
Potri.009G069000 Populus trichocarpa HOM05D007094 ORTHO05D008264 5.0e-17 91.3 129 45.0
Aa31LG3G14990 Aethionema arabicum HOM05D007094 ORTHO05D008264 6.6e-17 90.9 114 47.4
Hund21962 Selenicereus undatus HOM05D007094 ORTHO05D008264 6.6e-17 90.9 201 35.3
Lj1A303G25 Lonicera japonica HOM05D007094 ORTHO05D008264 2.5e-16 89.0 76 53.9
Lj1A294T17 Lonicera japonica HOM05D007094 ORTHO05D008264 4.7e-15 84.7 72 54.2
Lsat_1_v5_gn_2_26200 Lactuca sativa HOM05D007094 ORTHO05D008264 8.0e-15 84.0 113 46.0
Sabra16G0168900 Salix brachista HOM05D007094 ORTHO05D008264 1.4e-14 83.2 129 41.9
Zm00001eb110280 Zea mays HOM05D007094 ORTHO05D008264 1.4e-14 83.2 108 46.3
Zm00001eb329040 Zea mays HOM05D007094 ORTHO05D008264 3.0e-14 82.0 109 45.0
ECA238G4818 Erigeron canadensis HOM05D007094 ORTHO05D008264 5.2e-14 81.3 113 45.1
DCAR_029904 Daucus carota HOM05D007094 ORTHO05D008264 6.8e-14 80.9 92 47.8
BolC9t59296H Brassica oleracea HOM05D007094 ORTHO05D008264 8.9e-14 80.5 118 40.7
Eucgr.J00674 Eucalyptus grandis HOM05D007094 ORTHO05D008264 9.8e-13 77.0 91 50.5
Peaxi162Scf00032g02018 Petunia axillaris HOM05D021104 ORTHO05D008264 1.7e-12 76.3 79 51.9
vmacro08628 Vaccinium macrocarpon HOM05D007094 ORTHO05D008264 1.7e-12 76.3 82 51.2
Peaxi162Scf00004g04119 Petunia axillaris HOM05D007094 ORTHO05D008264 1.4e-11 73.2 91 47.3
Nitab4.5_0004018g0040 Nicotiana tabacum HOM05D007094 ORTHO05D008264 5.4e-11 71.2 92 47.8
Nitab4.5_0000390g0140 Nicotiana tabacum HOM05D021104 ORTHO05D008264 7.0e-11 70.9 79 49.4
Hma1.2p1_0460F.1_g157640 Hydrangea macrophylla HOM05D007094 ORTHO05D008264 1.6e-10 69.7 98 48.0
BraA10t44623Z Brassica rapa HOM05D007094 ORTHO05D008264 2.7e-10 68.9 117 38.5
HanXRQChr12g0381391 Helianthus annuus HOM05D007094 ORTHO05D008264 4.6e-10 68.2 99 41.4
PGSC0003DMG400004429 Solanum tuberosum HOM05D021104 ORTHO05D008264 6.0e-10 67.8 79 46.8
CDE02G1487 Ceratophyllum demersum HOM05D004500 ORTHO05D028702 7.8e-10 67.4 43 72.1
Nitab4.5_0006052g0020 Nicotiana tabacum HOM05D021104 ORTHO05D008264 7.8e-10 67.4 78 47.4
Solyc01g008680.4 Solanum lycopersicum HOM05D021104 ORTHO05D008264 7.8e-10 67.4 78 47.4
Sopen01g004200 Solanum pennellii HOM05D021104 ORTHO05D008264 7.8e-10 67.4 78 47.4
A10p25550 Brassica napus HOM05D007094 ORTHO05D008264 1.0e-09 67.0 107 41.1
BolC3t13146H Brassica oleracea HOM05D000282 ORTHO05D000272 3.0e-09 65.5 82 46.3
Oeu032576.1 Olea europaea HOM05D007094 ORTHO05D008264 1.9e-08 62.8 49 55.1
DCAR_029979 Daucus carota HOM05D007094 ORTHO05D008264 7.3e-08 60.8 60 50.0
Mapoly0029s0132 Marchantia polymorpha HOM05D001703 ORTHO05D005708 3.6e-07 58.5 118 33.9
Pp3c24_4990 Physcomitrium patens HOM05D007094 ORTHO05D008264 6.2e-07 57.8 115 34.8
SalBow6G5897 Salvia bowleyana HOM05D007094 ORTHO05D008264 6.2e-07 57.8 51 54.9
Haze_25678 Corylus avellana HOM05D007094 ORTHO05D008264 6.8e-06 54.3 114 36.0


User provided reference genes

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