Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0010270 Simmondsia chinensis HOM05D000031 ORTHO05D018975 7.2e-44 180.3 96 100.0
AUR62006695 Chenopodium quinoa HOM05D000031 ORTHO05D010980 1.9e-15 85.9 81 53.1
EL10Ac4g09944 Beta vulgaris HOM05D000031 ORTHO05D010980 9.2e-15 83.6 81 49.4
AUR62006693 Chenopodium quinoa HOM05D000031 ORTHO05D010980 9.2e-15 83.6 81 53.1
AUR62000349 Chenopodium quinoa HOM05D000031 ORTHO05D010980 1.2e-14 83.2 81 50.6
AUR62006694 Chenopodium quinoa HOM05D000031 ORTHO05D010980 1.6e-14 82.8 86 50.0
EL10Ac4g09945 Beta vulgaris HOM05D000031 ORTHO05D010980 4.6e-14 81.3 81 48.1
AUR62000351 Chenopodium quinoa HOM05D000031 ORTHO05D010980 1.3e-13 79.7 81 49.4
AUR62000348 Chenopodium quinoa HOM05D000031 ORTHO05D010980 2.3e-13 79.0 86 46.5
Ah.01g014540 Amaranthus hybridus HOM05D000031 ORTHO05D010980 6.6e-13 77.4 81 49.4
EL10Ac4g09943 Beta vulgaris HOM05D000031 ORTHO05D010980 2.5e-12 75.5 78 50.0
Ah.04g158800 Amaranthus hybridus HOM05D000031 ORTHO05D010980 4.3e-12 74.7 81 46.9
EL10Ac4g09946 Beta vulgaris HOM05D000031 ORTHO05D010980 5.6e-12 74.3 81 44.4
Sc09g0001580 Simmondsia chinensis HOM05D000031 ORTHO05D010980 7.3e-12 73.9 81 45.7
AUR62000350 Chenopodium quinoa HOM05D000031 ORTHO05D018975 6.2e-11 70.9 64 54.7
EL10Ac4g09949 Beta vulgaris HOM05D000031 ORTHO05D010980 1.1e-10 70.1 84 45.2
Sc09g0001570 Simmondsia chinensis HOM05D000031 ORTHO05D010980 2.4e-10 68.9 81 43.2
EL10Ac4g09947 Beta vulgaris HOM05D000031 ORTHO05D010980 6.8e-10 67.4 82 47.6
Sc20g0004510 Simmondsia chinensis HOM05D000031 ORTHO05D010980 3.4e-09 65.1 82 42.7
Sc20g0004560 Simmondsia chinensis HOM05D000031 ORTHO05D010980 5.8e-09 64.3 82 41.5
AUR62000352 Chenopodium quinoa HOM05D000031 ORTHO05D010980 3.8e-08 61.6 81 40.7
QL08p001711 Quercus lobata HOM05D000031 ORTHO05D018975 6.4e-08 60.8 78 43.6
Sc20g0004540 Simmondsia chinensis HOM05D000031 ORTHO05D010980 6.4e-08 60.8 82 41.5
Ah.09g236540 Amaranthus hybridus HOM05D000031 ORTHO05D010980 8.4e-08 60.5 69 46.4
TWI31G1017 Tripterygium wilfordii HOM05D000031 ORTHO05D000030 8.4e-08 60.5 96 38.5
AUR62006696 Chenopodium quinoa HOM05D000031 ORTHO05D010980 1.1e-07 60.1 81 39.5
TWI31G0862 Tripterygium wilfordii HOM05D000031 ORTHO05D000030 1.9e-07 59.3 80 43.8
QL08p001835 Quercus lobata HOM05D000031 ORTHO05D018975 5.4e-07 57.8 81 40.7
VMungo1383G1767 Vigna mungo HOM05D000031 ORTHO05D000030 1.6e-06 56.2 93 37.6
arahy.Tifrunner.gnm1.ann1.4DP4Q6 Arachis hypogaea HOM05D000031 ORTHO05D000030 2.7e-06 55.5 79 39.2
arahy.Tifrunner.gnm1.ann1.8KV2S6 Arachis hypogaea HOM05D000031 ORTHO05D000030 2.7e-06 55.5 79 39.2
Glyma.18G239600 Glycine max HOM05D000031 ORTHO05D000030 2.7e-06 55.5 80 40.0
Gohir.D11G221000 Gossypium hirsutum HOM05D000031 ORTHO05D000030 2.7e-06 55.5 85 42.4
Phvul.008G056800 Phaseolus vulgaris HOM05D000031 ORTHO05D000030 2.7e-06 55.5 93 36.6
Potri.004G192400 Populus trichocarpa HOM05D000031 ORTHO05D000030 2.7e-06 55.5 96 34.4
Gorai.007G238000 Gossypium raimondii HOM05D000031 ORTHO05D000030 3.5e-06 55.1 85 42.4
Potri.004G192100 Populus trichocarpa HOM05D000031 ORTHO05D000030 3.5e-06 55.1 96 35.4
TWI31G1025 Tripterygium wilfordii HOM05D000031 ORTHO05D000030 3.5e-06 55.1 96 35.4
Nn7g36474 Nelumbo nucifera HOM05D000031 ORTHO05D000030 4.6e-06 54.7 80 42.5
QL04p087712 Quercus lobata HOM05D000031 ORTHO05D010980 4.6e-06 54.7 83 38.6
Sabra04G0131000 Salix brachista HOM05D000031 ORTHO05D000030 6.0e-06 54.3 87 33.3
Sabra04G0131100 Salix brachista HOM05D000031 ORTHO05D000030 6.0e-06 54.3 87 33.3
TWI79G0932 Tripterygium wilfordii HOM05D000031 ORTHO05D000030 7.8e-06 53.9 80 40.0


User provided reference genes

Program Settings