Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0010260 Simmondsia chinensis HOM05D008013 ORTHO05D010149 5.9e-30 133.7 73 100.0
Hund07321 Selenicereus undatus HOM05D008013 ORTHO05D010149 3.9e-13 77.8 47 83.0
EL10Ac4g09411 Beta vulgaris HOM05D008013 ORTHO05D010149 8.0e-11 70.1 44 75.0
Cc09_g03310 Coffea canephora HOM05D008013 ORTHO05D010149 8.0e-11 70.1 48 72.9
Actinidia34775 Actinidia chinensis HOM05D008013 ORTHO05D010149 1.8e-10 68.9 44 81.8
MD04G1240900 Malus domestica HOM05D008013 ORTHO05D010149 1.8e-10 68.9 44 75.0
HanXRQChr11g0333671 Helianthus annuus HOM05D008013 ORTHO05D010149 2.3e-10 68.6 44 75.0
MD12G1257800 Malus domestica HOM05D008013 ORTHO05D010149 2.3e-10 68.6 44 75.0
Manes.09G183801 Manihot esculenta HOM05D008013 ORTHO05D010149 4.0e-10 67.8 44 75.0
Glyma.09G252532 Glycine max HOM05D008013 ORTHO05D010149 5.2e-10 67.4 44 72.7
Glyma.18G240151 Glycine max HOM05D008013 ORTHO05D010149 5.2e-10 67.4 44 72.7
Solyc04g150139.1 Solanum lycopersicum HOM05D008013 ORTHO05D010149 5.2e-10 67.4 49 71.4
THA.LOC104803516 Tarenaya hassleriana HOM05D008013 ORTHO05D010149 5.2e-10 67.4 44 75.0
CAN.G4.29 Capsicum annuum HOM05D008013 ORTHO05D010149 6.8e-10 67.0 44 75.0
FAN09G3946 Fragaria x ananassa HOM05D000837 ORTHO05D008386 6.8e-10 67.0 44 72.7
Lalb_Chr19g0126801 Lupinus albus HOM05D008013 ORTHO05D010149 6.8e-10 67.0 44 75.0
Potri.019G051850 Populus trichocarpa HOM05D008013 ORTHO05D010149 6.8e-10 67.0 43 76.7
Hund21874 Selenicereus undatus HOM05D008013 ORTHO05D010149 6.8e-10 67.0 35 94.3
Ciclev10013456m.g Citrus clementina HOM05D008013 ORTHO05D010149 8.9e-10 66.6 44 77.3
PGSC0003DMG402023117 Solanum tuberosum HOM05D008013 ORTHO05D010149 8.9e-10 66.6 44 77.3
Thecc.05G204600 Theobroma cacao HOM05D008013 ORTHO05D010149 8.9e-10 66.6 44 75.0
TPR.G29412 Trifolium pratense HOM05D008013 ORTHO05D010149 8.9e-10 66.6 44 70.5
FAN05G0262 Fragaria x ananassa HOM05D008013 ORTHO05D010149 1.2e-09 66.2 45 66.7
RcHm_v2.0_Chr3g0448311 Rosa chinensis HOM05D008013 ORTHO05D010149 1.2e-09 66.2 44 72.7
Sabra19G0056800 Salix brachista HOM05D008013 ORTHO05D010149 1.2e-09 66.2 44 72.7
Atru.chr12.2150 Acer truncatum HOM05D008013 ORTHO05D010149 1.5e-09 65.9 46 69.6
Haze_04520 Corylus avellana HOM05D008013 ORTHO05D010149 1.5e-09 65.9 44 72.7
Gohir.A13G155000 Gossypium hirsutum HOM05D008013 ORTHO05D010149 1.5e-09 65.9 47 72.3
Gohir.D13G159800 Gossypium hirsutum HOM05D008013 ORTHO05D010149 1.5e-09 65.9 47 72.3
vmacro10397 Vaccinium macrocarpon HOM05D000837 ORTHO05D008386 1.5e-09 65.9 44 77.3
CSS0003713 Camellia sinensis var. sinensis HOM05D008013 ORTHO05D010149 2.0e-09 65.5 48 72.9
CSS0043393 Camellia sinensis var. sinensis HOM05D008013 ORTHO05D010149 2.0e-09 65.5 48 72.9
Migut.F02069 Erythranthe guttata HOM05D008013 ORTHO05D010149 2.0e-09 65.5 48 64.6
Oeu001239.1 Olea europaea HOM05D008013 ORTHO05D010149 2.0e-09 65.5 48 64.6
Rhsim09G0131000 Rhododendron simsii HOM05D008013 ORTHO05D010149 2.0e-09 65.5 44 75.0
ClCG10G008070 Citrullus lanatus HOM05D000837 ORTHO05D008386 2.6e-09 65.1 42 73.8
Lj1g0002079 Lotus japonicus HOM05D008013 ORTHO05D010149 2.6e-09 65.1 44 70.5
Sed0019978 Sechium edule HOM05D008013 ORTHO05D010149 4.4e-09 64.3 43 67.4
Dinv02912 Davidia involucrata HOM05D008013 ORTHO05D010149 5.8e-09 63.9 48 66.7
Gohir.A08G224100 Gossypium hirsutum HOM05D008013 ORTHO05D010149 5.8e-09 63.9 44 72.7
TAR109G0001 Trochodendron aralioides HOM05D008013 ORTHO05D010149 5.8e-09 63.9 56 55.4
Gohir.D08G244400 Gossypium hirsutum HOM05D008013 ORTHO05D010149 7.5e-09 63.5 44 72.7
PGR119G0441 Punica granatum HOM05D000837 ORTHO05D008386 7.5e-09 63.5 43 74.4
CANSAT54G1767 Cannabis sativa HOM05D000837 ORTHO05D008386 9.8e-09 63.2 43 67.4
CiPaw.08G117300 Carya illinoinensis HOM05D008013 ORTHO05D010149 9.8e-09 63.2 44 68.2
CsaV3_5G032690 Cucumis sativus L. HOM05D008013 ORTHO05D010149 1.3e-08 62.8 43 67.4
Gorai.004G260700 Gossypium raimondii HOM05D008013 ORTHO05D010149 1.7e-08 62.4 54 63.0
TWI59G0485 Tripterygium wilfordii HOM05D008013 ORTHO05D010149 2.2e-08 62.0 44 70.5
unitig_736.g22502 Utricularia gibba HOM05D008013 ORTHO05D010149 2.2e-08 62.0 47 66.0
Phvul.008G056200 Phaseolus vulgaris HOM05D008013 ORTHO05D010149 2.9e-08 61.6 44 68.2
Ah.06g195780 Amaranthus hybridus HOM05D008013 ORTHO05D010149 6.4e-08 60.5 43 74.4
GSVIVG01019150001 Vitis vinifera HOM05D008013 ORTHO05D010149 6.4e-08 60.5 44 72.7
HanXRQChr05g0156911 Helianthus annuus HOM05D000837 ORTHO05D008386 1.4e-07 59.3 43 69.8
arahy.Tifrunner.gnm1.ann1.L7M8PN Arachis hypogaea HOM05D008013 ORTHO05D010149 3.2e-07 58.2 39 71.8
MBI07_g00621_MAGBIO Magnolia biondii HOM05D000837 ORTHO05D008386 4.1e-07 57.8 43 67.4
Nn1g08299 Nelumbo nucifera HOM05D008013 ORTHO05D010149 4.1e-07 57.8 43 62.8
Sed0019520 Sechium edule HOM05D008013 ORTHO05D010149 5.4e-07 57.4 41 65.9
Pp3c1_15100 Physcomitrium patens HOM05D008013 ORTHO05D010149 9.2e-07 56.6 48 50.0
Aa31LG2G20150 Aethionema arabicum HOM05D008013 ORTHO05D010149 1.6e-06 55.8 44 61.4
PSO357G0534 Papaver somniferum HOM05D008013 ORTHO05D010149 1.6e-06 55.8 45 62.2
PSO170G5632 Papaver somniferum HOM05D000837 ORTHO05D008386 2.7e-06 55.1 45 62.2
Sp7g28270 Schrenkiella parvula HOM05D008013 ORTHO05D010149 2.7e-06 55.1 44 56.8
A08p19260 Brassica napus HOM05D008013 ORTHO05D010149 4.6e-06 54.3 48 54.2
BraA03t15033Z Brassica rapa HOM05D008013 ORTHO05D010149 4.6e-06 54.3 48 50.0
BraA08t33887Z Brassica rapa HOM05D008013 ORTHO05D010149 4.6e-06 54.3 48 54.2
Carub.0007s1021 Capsella rubella HOM05D008013 ORTHO05D010149 4.6e-06 54.3 44 56.8
CARHR238290 Cardamine hirsuta HOM05D008013 ORTHO05D010149 6.0e-06 53.9 44 56.8
AagrBONN_evm.TU.Sc2ySwM_228.1824 Anthoceros agrestis HOM05D008013 ORTHO05D010149 7.8e-06 53.5 48 50.0


User provided reference genes

Program Settings