Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0009860 Simmondsia chinensis HOM05D004337 ORTHO05D005422 0.0e+00 1149.8 598 100.0
EL10Ac4g09743 Beta vulgaris HOM05D004337 ORTHO05D005422 2.2e-284 981.9 570 81.1
Dinv09624 Davidia involucrata HOM05D004337 ORTHO05D005422 2.2e-284 981.9 574 82.4
Hund21761 Selenicereus undatus HOM05D004337 ORTHO05D005422 2.5e-283 978.4 576 81.2
AUR62006971 Chenopodium quinoa HOM05D004337 ORTHO05D005422 4.7e-282 974.2 584 81.0
AUR62000615 Chenopodium quinoa HOM05D004337 ORTHO05D005422 2.3e-281 971.8 584 80.7
TAR376G0777 Trochodendron aralioides HOM05D004337 ORTHO05D005422 3.0e-281 971.5 600 77.5
Actinidia36582 Actinidia chinensis HOM05D004337 ORTHO05D005422 3.3e-280 968.0 555 82.9
Hma1.2p1_0296F.1_g116900 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 4.4e-280 967.6 572 80.6
CiPaw.15G184900 Carya illinoinensis HOM05D004337 ORTHO05D005422 9.7e-280 966.5 598 78.4
Manes.12G081000 Manihot esculenta HOM05D004337 ORTHO05D005422 6.3e-279 963.8 546 82.8
MELO3C003282.2 Cucumis melo HOM05D004337 ORTHO05D005422 8.2e-279 963.4 580 79.5
Cfa020919 Carpinus fangiana HOM05D004337 ORTHO05D005422 4.1e-278 961.1 580 79.5
Sabra04G0083600 Salix brachista HOM05D004337 ORTHO05D005422 4.1e-278 961.1 578 78.0
Sed0025757 Sechium edule HOM05D004337 ORTHO05D005422 9.1e-278 959.9 574 79.3
Potri.004G134500 Populus trichocarpa HOM05D004337 ORTHO05D005422 2.6e-277 958.4 574 78.9
Potri.T045800 Populus trichocarpa HOM05D004337 ORTHO05D005422 4.5e-277 957.6 574 79.3
GSVIVG01000243001 Vitis vinifera HOM05D004337 ORTHO05D005422 4.5e-277 957.6 603 77.8
CsaV3_4G030000 Cucumis sativus L. HOM05D004337 ORTHO05D005422 5.9e-277 957.2 574 79.4
Potri.018G137500 Populus trichocarpa HOM05D004337 ORTHO05D005422 1.3e-276 956.1 574 79.1
Gohir.A12G002300 Gossypium hirsutum HOM05D004337 ORTHO05D005422 2.9e-276 954.9 546 83.2
Prupe.4G286100 Prunus persica HOM05D004337 ORTHO05D005422 5.0e-276 954.1 572 80.2
Actinidia19947 Actinidia chinensis HOM05D004337 ORTHO05D005422 1.1e-275 953.0 549 82.5
MBI06_g32147_MAGBIO Magnolia biondii HOM05D004337 ORTHO05D005422 7.2e-275 950.3 551 81.1
Thecc.01G146600 Theobroma cacao HOM05D004337 ORTHO05D005422 3.6e-274 948.0 546 82.2
Gorai.008G001400 Gossypium raimondii HOM05D004337 ORTHO05D005422 6.1e-274 947.2 553 81.9
Gohir.A05G375100 Gossypium hirsutum HOM05D004337 ORTHO05D005422 8.0e-274 946.8 574 79.3
Gohir.D04G040600 Gossypium hirsutum HOM05D004337 ORTHO05D005422 8.0e-274 946.8 574 79.3
Gorai.012G045800 Gossypium raimondii HOM05D004337 ORTHO05D005422 8.0e-274 946.8 574 79.3
MD15G1140200 Malus domestica HOM05D004337 ORTHO05D005422 1.0e-273 946.4 570 78.4
Aqoxy5G01850 Aquilegia oxysepala HOM05D004337 ORTHO05D005422 4.0e-273 944.5 557 80.8
MSTRG.23236 Avicennia marina HOM05D004337 ORTHO05D005422 1.5e-272 942.6 552 80.6
Atru.chr3.1466 Acer truncatum HOM05D004337 ORTHO05D005422 3.3e-272 941.4 552 81.9
Oeu046358.1 Olea europaea HOM05D004337 ORTHO05D005422 3.7e-271 937.9 598 76.1
RcHm_v2.0_Chr3g0484771 Rosa chinensis HOM05D004337 ORTHO05D005422 1.1e-270 936.4 573 77.5
Nitab4.5_0000496g0240 Nicotiana tabacum HOM05D004337 ORTHO05D005422 1.8e-270 935.6 581 78.5
FvH4_1g25770 Fragaria vesca HOM05D004337 ORTHO05D005422 4.1e-270 934.5 599 75.5
QL10p037473 Quercus lobata HOM05D004337 ORTHO05D005422 9.1e-270 933.3 579 77.5
Peaxi162Scf00353g00735 Petunia axillaris HOM05D004337 ORTHO05D005422 1.2e-269 932.9 583 76.3
PGR119G0424 Punica granatum HOM05D004337 ORTHO05D005422 2.0e-269 932.2 552 81.0
CANSAT54G2432 Cannabis sativa HOM05D004337 ORTHO05D005422 5.9e-269 930.6 579 76.7
Ciclev10025224m.g Citrus clementina HOM05D004337 ORTHO05D005422 7.7e-269 930.2 548 80.8
FAN19G0301 Fragaria x ananassa HOM05D004337 ORTHO05D005422 1.7e-268 929.1 616 74.0
FAN23G1824 Fragaria x ananassa HOM05D004337 ORTHO05D005422 2.2e-268 928.7 616 72.6
Migut.H02542 Erythranthe guttata HOM05D004337 ORTHO05D005422 3.8e-268 927.9 550 78.9
FAN28G1720 Fragaria x ananassa HOM05D004337 ORTHO05D005422 3.8e-268 927.9 616 72.4
FAN26G1467 Fragaria x ananassa HOM05D004337 ORTHO05D005422 8.5e-268 926.8 616 72.4
arahy.Tifrunner.gnm1.ann1.X1BSDH Arachis hypogaea HOM05D004337 ORTHO05D005422 1.5e-267 926.0 569 78.4
THA.LOC104818397 Tarenaya hassleriana HOM05D004337 ORTHO05D005422 1.9e-267 925.6 574 78.2
Nitab4.5_0004764g0030 Nicotiana tabacum HOM05D004337 ORTHO05D005422 1.6e-266 922.5 583 77.9
Lsat_1_v5_gn_2_40441 Lactuca sativa HOM05D004337 ORTHO05D005422 2.7e-266 921.8 554 78.5
Sopen05g034740 Solanum pennellii HOM05D004337 ORTHO05D005422 6.1e-266 920.6 602 73.3
Oeu054207.1 Olea europaea HOM05D004337 ORTHO05D005422 2.3e-265 918.7 593 75.2
TPR.G7800 Trifolium pratense HOM05D004337 ORTHO05D005422 2.3e-265 918.7 599 74.1
Solyc05g056350.3 Solanum lycopersicum HOM05D004337 ORTHO05D005422 5.2e-265 917.5 602 73.1
TWI75G1462 Tripterygium wilfordii HOM05D004337 ORTHO05D005422 5.2e-265 917.5 548 78.1
Psat5g057120 Pisum sativum HOM05D004337 ORTHO05D005422 6.8e-265 917.1 579 76.0
Glyma.04G203800 Glycine max HOM05D004337 ORTHO05D005422 1.2e-264 916.4 600 74.8
VMungo1309G0234 Vigna mungo HOM05D004337 ORTHO05D005422 1.5e-264 916.0 603 74.8
Lalb_Chr07g0183961 Lupinus albus HOM05D004337 ORTHO05D005422 4.4e-264 914.4 602 74.3
PSO210G2848 Papaver somniferum HOM05D004337 ORTHO05D005422 5.7e-264 914.1 580 74.5
PGSC0003DMG400023451 Solanum tuberosum HOM05D004337 ORTHO05D005422 5.7e-264 914.1 609 72.4
PSO761G0180 Papaver somniferum HOM05D004337 ORTHO05D005422 9.8e-264 913.3 552 77.7
THA.LOC104819366 Tarenaya hassleriana HOM05D004337 ORTHO05D005422 9.8e-264 913.3 546 79.1
Eucgr.I00018 Eucalyptus grandis HOM05D004337 ORTHO05D005422 1.3e-263 912.9 547 79.9
Rhsim10G0124700 Rhododendron simsii HOM05D004337 ORTHO05D005422 1.3e-263 912.9 682 68.2
CAN.G1156.26 Capsicum annuum HOM05D004337 ORTHO05D005422 1.7e-263 912.5 574 75.6
Lj1g0000957 Lotus japonicus HOM05D004337 ORTHO05D005422 3.7e-263 911.4 601 74.0
Lalb_Chr12g0202711 Lupinus albus HOM05D004337 ORTHO05D005422 3.7e-263 911.4 602 74.1
Lj4A821G42 Lonicera japonica HOM05D004337 ORTHO05D005422 1.8e-262 909.1 579 78.1
Phvul.009G159800 Phaseolus vulgaris HOM05D004337 ORTHO05D005422 3.1e-262 908.3 574 76.8
Thhalv10013045m.g Eutrema salsugineum HOM05D004337 ORTHO05D005422 5.4e-262 907.5 604 73.3
ECA238G0122 Erigeron canadensis HOM05D004337 ORTHO05D005422 1.2e-261 906.4 555 77.7
Medtr3g098210 Medicago truncatula HOM05D004337 ORTHO05D005422 2.0e-261 905.6 582 75.3
Glyma.06G161400 Glycine max HOM05D004337 ORTHO05D005422 5.9e-261 904.0 562 77.6
HPP92_009218 Vanilla planifolia HOM05D004337 ORTHO05D005422 5.9e-261 904.0 550 78.2
COL.COLO4_33529 Corchorus olitorius HOM05D004337 ORTHO05D005422 1.7e-260 902.5 565 77.2
unitig_736.g22365 Utricularia gibba HOM05D004337 ORTHO05D005422 1.7e-260 902.5 583 75.0
Oeu017633.3 Olea europaea HOM05D004337 ORTHO05D005422 2.2e-260 902.1 574 76.1
ATR1089G072 Amborella trichopoda HOM05D004337 ORTHO05D005422 6.5e-260 900.6 549 77.8
AL6G19170 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 1.9e-259 899.0 601 72.0
HanXRQChr10g0285831 Helianthus annuus HOM05D004337 ORTHO05D005422 1.2e-258 896.3 520 80.6
Dinv10851 Davidia involucrata HOM05D004337 ORTHO05D005422 1.6e-258 896.0 527 81.8
CARHR204490 Cardamine hirsuta HOM05D004337 ORTHO05D005422 2.7e-258 895.2 606 71.9
Aa31LG11G2980 Aethionema arabicum HOM05D004337 ORTHO05D005422 4.7e-258 894.4 577 74.5
SGA_v2.0_scaffold12G06278 Striga asiatica HOM05D004337 ORTHO05D005422 4.7e-258 894.4 597 72.2
Carub.0006s0742 Capsella rubella HOM05D004337 ORTHO05D005422 1.4e-257 892.9 601 72.2
Zm00001eb082160 Zea mays HOM05D004337 ORTHO05D005422 1.8e-257 892.5 552 76.1
arahy.Tifrunner.gnm1.ann1.397MFZ Arachis hypogaea HOM05D004337 ORTHO05D005422 3.4e-256 888.3 594 74.2
BraA10t44874Z Brassica rapa HOM05D004337 ORTHO05D005422 3.4e-256 888.3 608 71.2
BolC9t59595H Brassica oleracea HOM05D004337 ORTHO05D005422 5.7e-256 887.5 608 71.4
C09p68510 Brassica napus HOM05D004337 ORTHO05D005422 2.2e-255 885.6 607 71.2
Os04g0441900 Oryza sativa ssp. japonica HOM05D004337 ORTHO05D005422 2.2e-255 885.6 549 74.7
BcaB08g37252 Brassica carinata HOM05D004337 ORTHO05D005422 8.3e-255 883.6 583 73.6
Thhalv10003872m.g Eutrema salsugineum HOM05D004337 ORTHO05D005422 8.3e-255 883.6 577 73.5
Ca_17042_v3 Cicer arietinum L. HOM05D004337 ORTHO05D005422 1.4e-254 882.9 598 72.2
A10p28250 Brassica napus HOM05D004337 ORTHO05D005422 1.8e-254 882.5 581 73.1
CARHR189960 Cardamine hirsuta HOM05D004337 ORTHO05D005422 3.1e-254 881.7 556 74.6
Nn5g27210 Nelumbo nucifera HOM05D004337 ORTHO05D005422 3.1e-254 881.7 543 78.3
Zm00001eb422980 Zea mays HOM05D004337 ORTHO05D005422 5.4e-254 880.9 549 75.0
AL6G34865 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 9.1e-254 880.2 553 75.0
Carub.0006s2135 Capsella rubella HOM05D004337 ORTHO05D005422 3.5e-253 878.2 551 75.1
BcaB04g19858 Brassica carinata HOM05D004337 ORTHO05D005422 7.7e-253 877.1 576 73.1
AT5G23575 Arabidopsis thaliana HOM05D004337 ORTHO05D005422 2.9e-252 875.2 553 74.7
BraA09t36334Z Brassica rapa HOM05D004337 ORTHO05D005422 5.0e-252 874.4 573 72.9
Aa31LG3G18040 Aethionema arabicum HOM05D004337 ORTHO05D005422 1.9e-251 872.5 552 75.7
Sp2g23620 Schrenkiella parvula HOM05D004337 ORTHO05D005422 1.9e-251 872.5 549 75.4
A09p06870 Brassica napus HOM05D004337 ORTHO05D005422 4.3e-251 871.3 553 74.7
DCAR_009619 Daucus carota HOM05D004337 ORTHO05D005422 4.3e-251 871.3 591 73.1
SGA_v2.0_scaffold51G18842 Striga asiatica HOM05D004337 ORTHO05D005422 1.2e-250 869.8 601 73.4
BraA06t26382Z Brassica rapa HOM05D004337 ORTHO05D005422 2.1e-250 869.0 550 74.5
A06p34530 Brassica napus HOM05D004337 ORTHO05D005422 2.8e-250 868.6 550 74.5
C09p07600 Brassica napus HOM05D004337 ORTHO05D005422 2.8e-250 868.6 551 74.4
BcaC04g23504 Brassica carinata HOM05D004337 ORTHO05D005422 3.6e-250 868.2 550 74.5
BolC9t53677H Brassica oleracea HOM05D004337 ORTHO05D005422 3.6e-250 868.2 550 74.5
C07p43970 Brassica napus HOM05D004337 ORTHO05D005422 5.7e-248 860.9 550 73.8
BolC7t44925H Brassica oleracea HOM05D004337 ORTHO05D005422 3.7e-247 858.2 550 73.6
vmacro12739 Vaccinium macrocarpon HOM05D004337 ORTHO05D005422 2.8e-242 842.0 904 52.8
Peaxi162Scf00651g00114 Petunia axillaris HOM05D004337 ORTHO05D005422 6.2e-242 840.9 579 70.8
Sp6g34400 Schrenkiella parvula HOM05D004337 ORTHO05D005422 8.0e-242 840.5 612 69.1
AT5G08500 Arabidopsis thaliana HOM05D004337 ORTHO05D005422 1.6e-237 826.2 527 75.1
CSS0021638 Camellia sinensis var. sinensis HOM05D004337 ORTHO05D005422 2.3e-236 822.4 499 79.4
SMO116G0204 Selaginella moellendorffii HOM05D004337 ORTHO05D005422 2.8e-234 815.5 539 71.4
Mapoly0020s0073 Marchantia polymorpha HOM05D004337 ORTHO05D005422 4.1e-230 801.6 551 68.8
AL6G18970 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 8.9e-225 783.9 867 49.4
Ah.06g188230 Amaranthus hybridus HOM05D004337 ORTHO05D005422 1.6e-218 763.1 535 71.6
Gohir.D12G002000 Gossypium hirsutum HOM05D004337 ORTHO05D005422 3.3e-211 738.8 546 67.2
Duzib264G1201 Durio zibethinus HOM05D004337 ORTHO05D005422 5.6e-211 738.0 574 64.6
Pp3c5_10010 Physcomitrium patens HOM05D004337 ORTHO05D005422 1.7e-204 716.5 565 62.5
Cc00_g00820 Coffea canephora HOM05D004337 ORTHO05D005422 9.6e-203 710.7 383 87.2
CBR_g44530 Chara braunii HOM05D004337 ORTHO05D005422 1.8e-196 689.9 563 58.8
CDE05G2996 Ceratophyllum demersum HOM05D004337 ORTHO05D005422 2.5e-187 659.4 453 69.1
Haze_19353 Corylus avellana HOM05D004337 ORTHO05D005422 8.8e-172 607.8 348 85.6
AL6G18990 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 1.5e-163 580.5 440 66.6
SHI38349 Sapria himalayana HOM05D004337 ORTHO05D005422 2.2e-154 550.1 400 69.8
Cre09.g397900 Chlamydomonas reinhardtii HOM05D004337 ORTHO05D005422 5.7e-147 525.4 566 47.5
ClCG04G002690 Citrullus lanatus HOM05D004337 ORTHO05D005422 1.7e-143 513.8 315 81.0
AL6G19200 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 7.5e-131 471.9 451 58.3
MCO10G243 Micromonas commoda HOM05D004337 ORTHO05D005422 1.8e-116 424.1 331 59.5
Haze_27034 Corylus avellana HOM05D004337 ORTHO05D005422 1.5e-102 377.9 452 44.2
PRCOL_00006172 Prasinoderma coloniale HOM05D004337 ORTHO05D005422 5.8e-99 365.9 557 38.2
Cfa024513 Carpinus fangiana HOM05D004337 ORTHO05D005422 8.7e-95 352.1 516 37.4
Cpa.g.sc138.38 Carica papaya HOM05D004337 ORTHO05D005422 2.0e-91 340.9 212 74.1
Cpa.g.sc3593.1 Carica papaya HOM05D004337 ORTHO05D005422 3.8e-90 336.7 188 86.7
Haze_19352 Corylus avellana HOM05D004337 ORTHO05D005422 1.4e-81 308.1 215 68.4
MCO07G426 Micromonas commoda HOM05D004337 ORTHO05D005422 4.0e-76 290.0 587 32.9
AL6G19020 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 5.8e-75 286.2 209 64.6
SalBow8G1257 Salvia bowleyana HOM05D004337 ORTHO05D005422 4.6e-72 276.6 236 63.1
SalBow8G3722 Salvia bowleyana HOM05D004337 ORTHO05D005422 4.6e-72 276.6 236 63.1
ClCG04G002680 Citrullus lanatus HOM05D004337 ORTHO05D005422 6.3e-69 266.2 167 73.7
PRCOL_00005640 Prasinoderma coloniale HOM05D004337 ORTHO05D005422 7.4e-62 242.7 367 34.1
Cc00_g00810 Coffea canephora HOM05D004337 ORTHO05D005422 4.5e-59 233.4 169 65.7
HPP92_009290 Vanilla planifolia HOM05D004337 ORTHO05D005422 1.0e-50 205.7 227 49.3
CDE05G3583 Ceratophyllum demersum HOM05D004337 ORTHO05D005422 4.5e-43 180.3 89 94.4
Psat3g077400 Pisum sativum HOM05D004337 ORTHO05D005422 3.0e-31 141.0 110 59.1
Hma1.2p1_0641F.1_g194250 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 4.4e-30 137.1 72 90.3
BcaC04g21668 Brassica carinata HOM05D004337 ORTHO05D021976 7.2e-25 119.8 161 43.5
C09p29160 Brassica napus HOM05D004337 ORTHO05D021976 1.2e-24 119.0 159 43.4
Hma1.2p1_0641F.1_g194230 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 3.3e-17 94.4 112 50.9
SEGI_12766 Sequoiadendron giganteum HOM05D004337 ORTHO05D005422 6.1e-16 90.1 43 93.0
AUR62044487 Chenopodium quinoa HOM05D004337 ORTHO05D021976 1.5e-14 85.5 49 73.5
AUR62044516 Chenopodium quinoa HOM05D004337 ORTHO05D021976 1.5e-14 85.5 49 73.5
SHI11402 Sapria himalayana HOM05D000039 ORTHO05D006865 4.9e-13 80.5 48 72.9
AUR62038356 Chenopodium quinoa HOM05D001477 ORTHO05D021976 3.2e-12 77.8 42 78.6
CDE05G0837 Ceratophyllum demersum HOM05D004337 ORTHO05D043897 9.8e-06 56.2 53 52.8


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