Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0009620 Simmondsia chinensis HOM05D007736 ORTHO05D009783 4.7e-261 904.0 478 100.0
Hund21796 Selenicereus undatus HOM05D007736 ORTHO05D009783 8.0e-67 258.8 381 42.8
Ah.06g188730 Amaranthus hybridus HOM05D007736 ORTHO05D009783 7.0e-63 245.7 452 38.7
EL10Ac4g09677 Beta vulgaris HOM05D007736 ORTHO05D009783 2.7e-62 243.8 433 40.9
AUR62000538 Chenopodium quinoa HOM05D007736 ORTHO05D009783 8.3e-56 222.2 448 37.9
AUR62006887 Chenopodium quinoa HOM05D007736 ORTHO05D009783 3.1e-55 220.3 445 38.0
Actinidia38961 Actinidia chinensis HOM05D007736 ORTHO05D009783 1.2e-51 208.4 423 35.0
Dinv24237 Davidia involucrata HOM05D007736 ORTHO05D009783 6.1e-51 206.1 275 43.6
Dinv19331 Davidia involucrata HOM05D007736 ORTHO05D009783 9.8e-49 198.7 437 32.7
Haze_10792 Corylus avellana HOM05D007736 ORTHO05D009783 8.3e-48 195.7 374 36.1
Eucgr.I02697 Eucalyptus grandis HOM05D007736 ORTHO05D009783 1.4e-47 194.9 269 42.4
Lj5P244T47 Lonicera japonica HOM05D007736 ORTHO05D009783 4.1e-47 193.4 432 34.0
Cfa021836 Carpinus fangiana HOM05D007736 ORTHO05D009783 1.2e-46 191.8 374 35.8
Cc02_g21990 Coffea canephora HOM05D007736 ORTHO05D009783 1.2e-46 191.8 325 38.2
ClCG09G014560 Citrullus lanatus HOM05D007736 ORTHO05D009783 2.0e-46 191.0 270 42.6
Sed0025125 Sechium edule HOM05D007736 ORTHO05D009783 7.8e-46 189.1 269 39.8
MELO3C028798.2 Cucumis melo HOM05D007736 ORTHO05D009783 1.7e-45 188.0 350 37.4
CsaV3_7G022310 Cucumis sativus L. HOM05D007736 ORTHO05D009783 3.0e-45 187.2 279 40.5
CiPaw.05G040000 Carya illinoinensis HOM05D007736 ORTHO05D009783 3.9e-45 186.8 411 34.5
Rhsim11G0133400 Rhododendron simsii HOM05D007736 ORTHO05D009783 1.1e-44 185.3 270 40.4
vmacro01801 Vaccinium macrocarpon HOM05D007736 ORTHO05D009783 2.3e-42 177.6 453 32.7
DCAR_021830 Daucus carota HOM05D007736 ORTHO05D009783 6.8e-42 176.0 409 33.7
Solyc01g104790.4 Solanum lycopersicum HOM05D007736 ORTHO05D009783 8.9e-42 175.6 281 39.5
Cpa.g.sc2.48 Carica papaya HOM05D007736 ORTHO05D009783 1.5e-41 174.9 392 32.1
COL.COLO4_20877 Corchorus olitorius HOM05D007736 ORTHO05D009783 2.0e-41 174.5 238 41.2
Sopen01g047310 Solanum pennellii HOM05D007736 ORTHO05D009783 2.0e-41 174.5 281 39.5
TAR625G1059 Trochodendron aralioides HOM05D007736 ORTHO05D009783 2.6e-41 174.1 470 30.6
PGSC0003DMG400029771 Solanum tuberosum HOM05D007736 ORTHO05D009783 5.8e-41 172.9 283 38.9
TWI14G1332 Tripterygium wilfordii HOM05D007736 ORTHO05D009783 5.8e-41 172.9 265 38.1
Phvul.006G209200 Phaseolus vulgaris HOM05D007736 ORTHO05D009783 7.5e-41 172.6 429 31.7
Sed0013332 Sechium edule HOM05D007736 ORTHO05D009783 1.7e-40 171.4 279 37.6
Thecc.02G144400 Theobroma cacao HOM05D007736 ORTHO05D009783 2.9e-40 170.6 250 40.0
Potri.012G020400 Populus trichocarpa HOM05D007736 ORTHO05D009783 4.9e-40 169.9 375 31.2
Potri.015G008200 Populus trichocarpa HOM05D007736 ORTHO05D009783 1.4e-39 168.3 374 32.1
QL11p018598 Quercus lobata HOM05D007736 ORTHO05D009783 4.6e-38 163.3 363 33.3
arahy.Tifrunner.gnm1.ann1.JZ71MD Arachis hypogaea HOM05D007736 ORTHO05D009783 6.0e-38 162.9 429 30.3
Sabra12G0012700 Salix brachista HOM05D007736 ORTHO05D009783 7.8e-38 162.5 377 30.0
arahy.Tifrunner.gnm1.ann1.40XV2D Arachis hypogaea HOM05D007736 ORTHO05D009783 3.0e-37 160.6 428 30.1
CAN.G523.104 Capsicum annuum HOM05D007736 ORTHO05D009783 1.1e-36 158.7 288 37.5
Manes.04G057900 Manihot esculenta HOM05D007736 ORTHO05D009783 1.5e-36 158.3 265 38.5
Nitab4.5_0000249g0440 Nicotiana tabacum HOM05D007736 ORTHO05D009783 1.9e-36 157.9 300 35.3
PGR142G3153 Punica granatum HOM05D007736 ORTHO05D009783 1.9e-36 157.9 248 38.3
Sabra15G0006300 Salix brachista HOM05D007736 ORTHO05D009783 2.5e-36 157.5 374 31.3
VMungo0540G1970 Vigna mungo HOM05D007736 ORTHO05D009783 1.2e-35 155.2 402 30.3
Psat1g218640 Pisum sativum HOM05D007736 ORTHO05D009783 1.1e-34 152.1 373 30.6
HanXRQChr16g0514111 Helianthus annuus HOM05D007736 ORTHO05D009783 3.1e-34 150.6 244 40.2
Glyma.15G050700 Glycine max HOM05D007736 ORTHO05D009783 5.2e-34 149.8 388 29.4
Nitab4.5_0014357g0010 Nicotiana tabacum HOM05D007736 ORTHO05D009783 5.2e-34 149.8 307 33.9
MSTRG.27826 Avicennia marina HOM05D007736 ORTHO05D009783 6.8e-34 149.4 259 36.7
Ciclev10028677m.g Citrus clementina HOM05D007736 ORTHO05D009783 9.8e-33 145.6 307 34.2
Lsat_1_v5_gn_5_106541 Lactuca sativa HOM05D007736 ORTHO05D009783 9.8e-33 145.6 260 35.4
Glyma.08G181600 Glycine max HOM05D007736 ORTHO05D009783 2.9e-32 144.1 408 29.2
Atru.chr6.1122 Acer truncatum HOM05D007736 ORTHO05D009783 3.7e-32 143.7 372 30.1
Actinidia00233 Actinidia chinensis HOM05D007736 ORTHO05D009783 4.9e-32 143.3 223 40.4
Lj6g0003665 Lotus japonicus HOM05D007736 ORTHO05D009783 5.4e-31 139.8 278 33.8
Migut.N01016 Erythranthe guttata HOM05D007736 ORTHO05D009783 4.6e-30 136.7 355 31.0
Ca_00110_v3 Cicer arietinum L. HOM05D007736 ORTHO05D009783 6.0e-30 136.3 275 34.9
MSTRG.5252 Avicennia marina HOM05D007736 ORTHO05D009783 2.5e-28 131.0 265 34.7
TPR.G19753 Trifolium pratense HOM05D007736 ORTHO05D009783 2.5e-28 131.0 379 28.8
Medtr2g008130 Medicago truncatula HOM05D007736 ORTHO05D009783 5.6e-28 129.8 269 32.0
ECA234G2384 Erigeron canadensis HOM05D007736 ORTHO05D009783 8.1e-27 125.9 248 35.1
Prupe.6G356600 Prunus persica HOM05D007736 ORTHO05D009783 6.8e-26 122.9 193 40.4
RcHm_v2.0_Chr3g0448601 Rosa chinensis HOM05D007736 ORTHO05D009783 1.5e-25 121.7 188 38.8
Prupe.7G056800 Prunus persica HOM05D007736 ORTHO05D009783 2.6e-25 120.9 201 37.3
HanXRQChr10g0289121 Helianthus annuus HOM05D007736 ORTHO05D009783 1.3e-24 118.6 252 35.3
unitig_26.g9583 Utricularia gibba HOM05D007736 ORTHO05D009783 1.7e-24 118.2 197 36.0
Lalb_Chr20g0123201 Lupinus albus HOM05D007736 ORTHO05D009783 1.4e-23 115.2 292 31.8
Aqoxy4G00650 Aquilegia oxysepala HOM05D007736 ORTHO05D009783 1.9e-23 114.8 414 28.5
FvH4_6g01062 Fragaria vesca HOM05D000868 ORTHO05D000711 1.9e-23 114.8 154 41.6
MD04G1236600 Malus domestica HOM05D007736 ORTHO05D009783 2.4e-23 114.4 171 39.2
FAN05G0537 Fragaria x ananassa HOM05D007736 ORTHO05D009783 4.1e-23 113.6 154 40.9
FAN02G1431 Fragaria x ananassa HOM05D007736 ORTHO05D009783 9.2e-23 112.5 122 45.9
FAN14G5928 Fragaria x ananassa HOM05D007736 ORTHO05D009783 9.2e-23 112.5 122 45.9
CDE02G1981 Ceratophyllum demersum HOM05D007736 ORTHO05D009783 1.2e-22 112.1 263 31.9
FAN09G0667 Fragaria x ananassa HOM05D007736 ORTHO05D009783 2.7e-22 110.9 121 45.5
MD12G1255900 Malus domestica HOM05D007736 ORTHO05D009783 3.5e-22 110.5 144 41.7
Nn1g06123 Nelumbo nucifera HOM05D007736 ORTHO05D009783 3.5e-22 110.5 120 45.0
Aqoxy5G02135 Aquilegia oxysepala HOM05D007736 ORTHO05D009783 4.6e-22 110.2 418 27.0
FAN05G0165 Fragaria x ananassa HOM05D007736 ORTHO05D009783 4.6e-22 110.2 154 40.3
SGA_v2.0_scaffold45G17286 Striga asiatica HOM05D007736 ORTHO05D009783 9.9e-17 92.4 239 30.5
ATR0772G143 Amborella trichopoda HOM05D007736 ORTHO05D009783 2.2e-16 91.3 242 30.2
TAR381G1413 Trochodendron aralioides HOM05D007736 ORTHO05D009783 2.4e-15 87.8 99 46.5
Zm00001eb382360 Zea mays HOM05D007736 ORTHO05D009783 9.6e-12 75.9 270 31.1
Oeu012723.3 Olea europaea HOM05D007736 ORTHO05D009783 3.4e-09 67.4 147 36.1
Os06g0468400 Oryza sativa ssp. japonica HOM05D007736 ORTHO05D009783 5.8e-09 66.6 287 29.3
Peaxi162Scf01290g00019 Petunia axillaris HOM05D007736 ORTHO05D009783 6.0e-06 56.6 217 29.5


User provided reference genes

Program Settings