Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0009350 Simmondsia chinensis HOM05D006221 ORTHO05D007759 0.0e+00 1250.7 624 100.0
AUR62006807 Chenopodium quinoa HOM05D006221 ORTHO05D007759 8.2e-221 770.8 621 65.7
AUR62000466 Chenopodium quinoa HOM05D006221 ORTHO05D007759 4.2e-217 758.4 623 65.2
Hund07275 Selenicereus undatus HOM05D006221 ORTHO05D007759 2.9e-210 735.7 623 63.1
EL10Ac4g09547 Beta vulgaris HOM05D006221 ORTHO05D007759 3.3e-206 722.2 614 61.9
Hund07280 Selenicereus undatus HOM05D006221 ORTHO05D007759 4.3e-206 721.8 533 68.7
Actinidia11678 Actinidia chinensis HOM05D006221 ORTHO05D007759 2.2e-202 709.5 625 61.0
GSVIVG01031316001 Vitis vinifera HOM05D006221 ORTHO05D007759 2.2e-202 709.5 624 61.1
Dinv30939 Davidia involucrata HOM05D006221 ORTHO05D007759 1.4e-201 706.8 631 60.5
Manes.09G180400 Manihot esculenta HOM05D006221 ORTHO05D007759 1.7e-197 693.3 627 58.7
QL03p010449 Quercus lobata HOM05D006221 ORTHO05D007759 2.5e-193 679.5 626 59.3
vmacro01605 Vaccinium macrocarpon HOM05D006221 ORTHO05D007759 8.8e-191 671.0 667 55.2
Atru.chr12.1555 Acer truncatum HOM05D006221 ORTHO05D007759 1.1e-190 670.6 627 58.2
Potri.005G003400 Populus trichocarpa HOM05D006221 ORTHO05D007759 9.7e-190 667.5 626 59.1
PGR083G2161 Punica granatum HOM05D006221 ORTHO05D007759 1.8e-188 663.3 619 59.0
Haze_03998 Corylus avellana HOM05D006221 ORTHO05D007759 5.3e-188 661.8 679 55.2
Sabra05G0000700 Salix brachista HOM05D006221 ORTHO05D007759 9.1e-188 661.0 624 58.3
Sabra05G0014800 Salix brachista HOM05D006221 ORTHO05D007759 3.5e-187 659.1 624 58.2
CiPaw.07G035200 Carya illinoinensis HOM05D006221 ORTHO05D007759 1.0e-186 657.5 556 62.1
Solyc01g101110.3 Solanum lycopersicum HOM05D006221 ORTHO05D007759 1.3e-186 657.1 625 56.6
Hma1.2p1_0052F.1_g030430 Hydrangea macrophylla HOM05D006221 ORTHO05D007759 1.1e-185 654.1 634 57.6
Sopen01g044560 Solanum pennellii HOM05D006221 ORTHO05D007759 1.5e-185 653.7 628 56.4
MSTRG.16421 Avicennia marina HOM05D006221 ORTHO05D007759 1.9e-185 653.3 617 57.5
Lju99A6T47 Lonicera japonica HOM05D006221 ORTHO05D007759 4.2e-185 652.1 623 57.8
Migut.B00875 Erythranthe guttata HOM05D006221 ORTHO05D007759 7.2e-185 651.4 619 57.5
TWI38G0202 Tripterygium wilfordii HOM05D006221 ORTHO05D007759 6.1e-184 648.3 631 56.4
Ciclev10011303m.g Citrus clementina HOM05D006221 ORTHO05D007759 4.0e-183 645.6 632 55.2
CsaV3_1G038010 Cucumis sativus L. HOM05D006221 ORTHO05D007759 5.2e-183 645.2 622 55.9
Nn3g21902 Nelumbo nucifera HOM05D006221 ORTHO05D007759 1.5e-182 643.7 639 55.7
Rhsim11G0101500 Rhododendron simsii HOM05D006221 ORTHO05D007759 1.5e-182 643.7 745 49.8
Eucgr.B01816 Eucalyptus grandis HOM05D006221 ORTHO05D007759 2.2e-181 639.8 621 57.2
Oeu016545.1 Olea europaea HOM05D006221 ORTHO05D007759 2.8e-181 639.4 615 56.4
CANSAT54G2840 Cannabis sativa HOM05D006221 ORTHO05D007759 7.0e-180 634.8 540 61.3
Lj1g0008157 Lotus japonicus HOM05D006221 ORTHO05D007759 7.0e-180 634.8 631 57.2
Ca_09279_v3 Cicer arietinum L. HOM05D006221 ORTHO05D007759 9.1e-180 634.4 615 56.7
Thhalv10007117m.g Eutrema salsugineum HOM05D006221 ORTHO05D007759 2.0e-179 633.3 553 60.0
Thecc.05G328800 Theobroma cacao HOM05D006221 ORTHO05D007759 5.9e-179 631.7 610 57.5
Aqoxy2G02530 Aquilegia oxysepala HOM05D006221 ORTHO05D007759 1.0e-178 630.9 564 59.9
Glyma.19G226000 Glycine max HOM05D006221 ORTHO05D007759 1.0e-178 630.9 619 56.1
THA.LOC104816844 Tarenaya hassleriana HOM05D006221 ORTHO05D007759 1.7e-178 630.2 619 55.4
BraA08t35366Z Brassica rapa HOM05D006221 ORTHO05D007759 2.2e-178 629.8 615 56.4
CARHR009420 Cardamine hirsuta HOM05D006221 ORTHO05D007759 2.2e-178 629.8 619 56.1
Sed0012716 Sechium edule HOM05D006221 ORTHO05D007759 2.9e-178 629.4 625 54.9
Lalb_Chr18g0046191 Lupinus albus HOM05D006221 ORTHO05D007759 4.2e-177 625.5 631 54.5
TPR.G1625 Trifolium pratense HOM05D006221 ORTHO05D007759 5.5e-177 625.2 620 55.0
AT1G09450 Arabidopsis thaliana HOM05D006221 ORTHO05D007759 3.6e-176 622.5 613 56.0
Cc02_g35760 Coffea canephora HOM05D006221 ORTHO05D007759 1.8e-175 620.2 647 55.6
Duzib177G0418 Durio zibethinus HOM05D006221 ORTHO05D007759 1.8e-175 620.2 556 59.9
Sp1g08060 Schrenkiella parvula HOM05D006221 ORTHO05D007759 1.8e-175 620.2 615 56.1
Prupe.6G305800 Prunus persica HOM05D006221 ORTHO05D007759 2.3e-175 619.8 598 57.2
AL1G19970 Arabidopsis lyrata HOM05D006221 ORTHO05D007759 3.0e-175 619.4 610 54.9
Gohir.A13G113400 Gossypium hirsutum HOM05D006221 ORTHO05D007759 1.3e-173 614.0 613 55.0
ClCG03G017850 Citrullus lanatus HOM05D006221 ORTHO05D007759 1.7e-173 613.6 625 55.2
BcaB03g13298 Brassica carinata HOM05D006221 ORTHO05D007759 2.8e-173 612.8 636 54.1
arahy.Tifrunner.gnm1.ann1.CKL802 Arachis hypogaea HOM05D006221 ORTHO05D007759 6.3e-173 611.7 626 55.6
Carub.0001s0880 Capsella rubella HOM05D006221 ORTHO05D007759 8.3e-173 611.3 614 55.0
A08p34550 Brassica napus HOM05D006221 ORTHO05D007759 1.1e-172 610.9 632 54.9
Phvul.001G222600 Phaseolus vulgaris HOM05D006221 ORTHO05D007759 1.8e-172 610.1 620 53.7
Psat3g014840 Pisum sativum HOM05D006221 ORTHO05D007759 2.4e-172 609.8 556 56.8
Gohir.D13G116600 Gossypium hirsutum HOM05D006221 ORTHO05D007759 3.1e-172 609.4 612 54.6
VMungo1383G1939 Vigna mungo HOM05D006221 ORTHO05D007759 3.1e-172 609.4 549 57.4
MD04G1187300 Malus domestica HOM05D006221 ORTHO05D007759 9.1e-172 607.8 556 58.5
Gorai.013G131100 Gossypium raimondii HOM05D006221 ORTHO05D007759 1.6e-171 607.1 623 54.1
Aa31LG1G5650 Aethionema arabicum HOM05D006221 ORTHO05D007759 2.0e-171 606.7 648 53.5
SGA_v2.0_scaffold671G53422 Striga asiatica HOM05D006221 ORTHO05D007759 1.3e-170 604.0 665 53.2
PSO210G0944 Papaver somniferum HOM05D006221 ORTHO05D007759 2.3e-170 603.2 623 54.1
C08p12920 Brassica napus HOM05D006221 ORTHO05D007759 1.1e-169 600.9 631 53.9
PSO761G0564 Papaver somniferum HOM05D006221 ORTHO05D007759 9.5e-169 597.8 623 53.8
BolC8t48922H Brassica oleracea HOM05D006221 ORTHO05D007759 5.2e-167 592.0 643 52.9
Medtr7g111610 Medicago truncatula HOM05D006221 ORTHO05D007759 3.4e-166 589.3 635 52.8
SalBow5G5479 Salvia bowleyana HOM05D006221 ORTHO05D007759 4.4e-166 589.0 657 51.8
DCAR_005251 Daucus carota HOM05D006221 ORTHO05D007759 2.2e-165 586.6 633 52.3
RcHm_v2.0_Chr3g0458361 Rosa chinensis HOM05D006221 ORTHO05D007759 6.3e-165 585.1 598 55.5
arahy.Tifrunner.gnm1.ann1.7121P0 Arachis hypogaea HOM05D006221 ORTHO05D007759 1.6e-163 580.5 626 54.3
FvH4_6g08390 Fragaria vesca HOM05D006221 ORTHO05D007759 1.3e-162 577.4 612 53.6
BcaC07g38511 Brassica carinata HOM05D006221 ORTHO05D007759 2.9e-162 576.2 619 52.3
FAN05G2605 Fragaria x ananassa HOM05D006221 ORTHO05D007759 3.9e-162 575.9 609 53.5
HanXRQChr14g0449401 Helianthus annuus HOM05D006221 ORTHO05D007759 3.9e-162 575.9 613 52.4
MBI19_g32730_MAGBIO Magnolia biondii HOM05D006221 ORTHO05D007759 4.3e-161 572.4 645 53.0
ECA236G2609 Erigeron canadensis HOM05D006221 ORTHO05D007759 5.6e-161 572.0 608 52.1
FAN02G1566 Fragaria x ananassa HOM05D006221 ORTHO05D007759 5.8e-158 562.0 589 54.2
PGSC0003DMG400018290 Solanum tuberosum HOM05D006221 ORTHO05D007759 7.5e-158 561.6 530 56.8
CAN.G1248.26 Capsicum annuum HOM05D006221 ORTHO05D007759 9.8e-158 561.2 655 50.4
Peaxi162Scf00357g00116 Petunia axillaris HOM05D006221 ORTHO05D007759 3.7e-157 559.3 624 52.4
Lsat_1_v5_gn_9_77141 Lactuca sativa HOM05D006221 ORTHO05D007759 6.0e-155 552.0 547 53.9
Nitab4.5_0014566g0010 Nicotiana tabacum HOM05D006221 ORTHO05D007759 1.0e-154 551.2 616 50.6
Nitab4.5_0001931g0080 Nicotiana tabacum HOM05D006221 ORTHO05D007759 2.8e-152 543.1 542 53.7
Dinv30938 Davidia involucrata HOM05D006221 ORTHO05D007759 1.0e-146 524.6 404 65.3
Hma1.2p1_0052F.1_g030440 Hydrangea macrophylla HOM05D006221 ORTHO05D007759 3.0e-146 523.1 555 53.9
Zm00001eb109970 Zea mays HOM05D006221 ORTHO05D007759 5.2e-143 512.3 626 49.4
PSO017G3773 Papaver somniferum HOM05D006221 ORTHO05D007759 6.8e-143 511.9 501 55.3
Potri.013G003600 Populus trichocarpa HOM05D006221 ORTHO05D007759 3.1e-135 486.5 365 66.0
Ah.10g026960 Amaranthus hybridus HOM05D006221 ORTHO05D007759 3.4e-134 483.0 421 59.6
unitig_699.g19069 Utricularia gibba HOM05D006221 ORTHO05D007759 7.1e-132 475.3 557 50.8
HPP92_001185 Vanilla planifolia HOM05D006221 ORTHO05D007759 4.3e-129 466.1 601 45.6
ATR0796G167 Amborella trichopoda HOM05D006221 ORTHO05D007759 3.9e-122 443.0 614 44.8
SHI18018 Sapria himalayana HOM05D006221 ORTHO05D007759 7.6e-118 428.7 512 49.4
SEGI_23402 Sequoiadendron giganteum HOM05D006221 ORTHO05D007759 6.9e-111 405.6 337 60.5
MELO3C015244.2 Cucumis melo HOM05D006221 ORTHO05D007759 3.2e-108 396.7 365 57.5
AagrBONN_evm.TU.Sc2ySwM_228.2896 Anthoceros agrestis HOM05D006221 ORTHO05D007759 3.1e-103 380.2 363 51.8
Mapoly0101s0065 Marchantia polymorpha HOM05D006221 ORTHO05D007759 1.3e-101 374.8 389 51.7
Pp3c5_21110 Physcomitrium patens HOM05D006221 ORTHO05D007759 2.9e-101 373.6 334 55.1
TAR633G1110 Trochodendron aralioides HOM05D003727 ORTHO05D004731 1.0e-98 365.2 470 48.3
CDE08G0155 Ceratophyllum demersum HOM05D006221 ORTHO05D007759 7.9e-91 339.0 568 40.0
CBR_g46893 Chara braunii HOM05D006221 ORTHO05D007759 1.2e-86 325.1 333 49.5
FAN09G0827 Fragaria x ananassa HOM05D006221 ORTHO05D007759 5.3e-79 299.7 516 42.2
SMO169G0298 Selaginella moellendorffii HOM05D006221 ORTHO05D007759 6.3e-64 249.6 225 52.9
COL.COLO4_05510 Corchorus olitorius HOM05D006221 ORTHO05D007759 6.1e-59 233.0 615 31.5
Cpa.g.sc48.218 Carica papaya HOM05D006221 ORTHO05D007759 2.6e-57 227.6 535 34.0
Cre02.g108000 Chlamydomonas reinhardtii HOM05D006221 ORTHO05D007759 3.7e-56 223.8 352 37.8
Glyma.03G228700 Glycine max HOM05D006221 ORTHO05D007759 3.6e-51 207.2 144 68.1
Lj9A230T20 Lonicera japonica HOM05D006221 ORTHO05D007759 1.2e-41 175.6 255 41.2
MCO05G201 Micromonas commoda HOM05D006221 ORTHO05D007759 2.1e-35 154.8 168 47.6
PRCOL_00002024 Prasinoderma coloniale HOM05D006221 ORTHO05D007759 1.9e-31 141.7 192 41.1
Nn5g27477 Nelumbo nucifera HOM05D001388 ORTHO05D001234 5.1e-29 133.7 102 63.7
Actinidia16908 Actinidia chinensis HOM05D006221 ORTHO05D007759 1.5e-25 122.1 198 42.9
C09p35620 Brassica napus HOM05D006221 ORTHO05D007759 1.2e-17 95.9 68 61.8
BolC9t56398H Brassica oleracea HOM05D006221 ORTHO05D007759 1.2e-17 95.9 68 61.8
PRCOL_00002025 Prasinoderma coloniale HOM05D006221 ORTHO05D007759 3.8e-16 90.9 221 32.1
FvH4_1g12820 Fragaria vesca HOM05D006221 ORTHO05D007759 7.3e-12 76.6 77 54.5
Actinidia26529 Actinidia chinensis HOM05D006221 ORTHO05D007759 5.3e-10 70.5 37 70.3


User provided reference genes

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