Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0007600 Simmondsia chinensis HOM05D006614 ORTHO05D008217 0.0e+00 1166.4 602 100.0
GSVIVG01014198001 Vitis vinifera HOM05D006614 ORTHO05D008217 8.4e-215 750.7 607 63.8
PGR142G0467 Punica granatum HOM05D006614 ORTHO05D008217 3.2e-214 748.8 579 68.6
Manes.15G094800 Manihot esculenta HOM05D006614 ORTHO05D008217 1.3e-212 743.4 607 64.1
CSS0027020 Camellia sinensis var. sinensis HOM05D006614 ORTHO05D008217 2.3e-212 742.7 616 66.2
Ah.09g230960 Amaranthus hybridus HOM05D006614 ORTHO05D008217 6.7e-212 741.1 630 62.7
TAR375G0652 Trochodendron aralioides HOM05D006614 ORTHO05D008217 7.4e-211 737.6 629 63.6
EL10Ac8g18445 Beta vulgaris HOM05D006614 ORTHO05D008217 6.3e-210 734.6 626 65.3
Migut.M00728 Erythranthe guttata HOM05D006614 ORTHO05D008217 8.2e-210 734.2 611 65.1
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 1.8e-209 733.0 606 63.9
Nitab4.5_0006953g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 1.8e-209 733.0 609 62.1
Cpa.g.sc77.8 Carica papaya HOM05D006614 ORTHO05D008217 6.5e-207 724.5 606 64.4
Nitab4.5_0003565g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 1.4e-206 723.4 624 60.9
Thecc.07G117000 Theobroma cacao HOM05D006614 ORTHO05D008217 1.9e-206 723.0 581 69.9
Peaxi162Scf00111g01423 Petunia axillaris HOM05D006614 ORTHO05D008217 9.3e-206 720.7 577 64.0
COL.COLO4_17543 Corchorus olitorius HOM05D006614 ORTHO05D008217 3.5e-205 718.8 580 67.1
TWI38G0322 Tripterygium wilfordii HOM05D006614 ORTHO05D008217 3.5e-205 718.8 607 65.2
Hma1.2p1_0290F.1_g114830 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 5.1e-204 714.9 604 65.2
ClCG11G017450 Citrullus lanatus HOM05D006614 ORTHO05D008217 6.7e-204 714.5 598 66.4
Duzib213G0629 Durio zibethinus HOM05D006614 ORTHO05D008217 8.7e-204 714.1 599 66.8
Gohir.D07G233600 Gossypium hirsutum HOM05D006614 ORTHO05D008217 1.1e-203 713.8 583 68.3
Lj1P829T27 Lonicera japonica HOM05D006614 ORTHO05D008217 5.7e-203 711.4 608 65.0
Gorai.001G269000 Gossypium raimondii HOM05D006614 ORTHO05D008217 7.4e-203 711.1 606 67.0
DCAR_021025 Daucus carota HOM05D006614 ORTHO05D008217 9.7e-203 710.7 593 65.8
Gohir.A07G226400 Gossypium hirsutum HOM05D006614 ORTHO05D008217 9.7e-203 710.7 583 68.6
Prupe.4G164700 Prunus persica HOM05D006614 ORTHO05D008217 9.7e-203 710.7 619 65.9
PGSC0003DMG400046940 Solanum tuberosum HOM05D006614 ORTHO05D008217 1.3e-202 710.3 611 63.0
FvH4_3g18290 Fragaria vesca HOM05D006614 ORTHO05D008217 1.1e-201 707.2 618 60.2
Actinidia12578 Actinidia chinensis HOM05D006614 ORTHO05D008217 2.4e-201 706.1 600 61.2
FAN16G2994 Fragaria x ananassa HOM05D006614 ORTHO05D008217 2.4e-201 706.1 616 60.4
Solyc07g062440.1 Solanum lycopersicum HOM05D006614 ORTHO05D008217 6.9e-201 704.5 611 62.7
Sopen07g030680 Solanum pennellii HOM05D006614 ORTHO05D008217 6.9e-201 704.5 611 62.7
FAN11G1715 Fragaria x ananassa HOM05D006614 ORTHO05D008217 1.5e-200 703.4 616 60.1
RcHm_v2.0_Chr5g0030921 Rosa chinensis HOM05D006614 ORTHO05D008217 2.0e-200 703.0 620 60.3
Thecc.07G116400 Theobroma cacao HOM05D006614 ORTHO05D008217 2.6e-200 702.6 503 75.3
vmacro23466 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 1.0e-199 700.7 608 60.2
MD03G1243600 Malus domestica HOM05D006614 ORTHO05D008217 2.2e-199 699.5 616 64.8
MELO3C025640.2 Cucumis melo HOM05D006614 ORTHO05D008217 6.5e-199 698.0 586 66.4
HanXRQChr15g0476201 Helianthus annuus HOM05D006614 ORTHO05D008217 2.5e-198 696.0 602 63.6
THA.LOC104822565 Tarenaya hassleriana HOM05D006614 ORTHO05D008217 7.2e-198 694.5 611 61.5
LjContig00141g0022614 Lotus japonicus HOM05D006614 ORTHO05D008217 9.4e-198 694.1 597 62.5
Rhsim06G0208100 Rhododendron simsii HOM05D006614 ORTHO05D008217 1.2e-197 693.7 608 63.3
Lalb_Chr17g0346371 Lupinus albus HOM05D006614 ORTHO05D008217 2.7e-197 692.6 611 62.0
CsaV3_4G033120 Cucumis sativus L. HOM05D006614 ORTHO05D008217 3.6e-197 692.2 593 63.6
MSTRG.6677 Avicennia marina HOM05D006614 ORTHO05D008217 4.6e-197 691.8 603 62.5
CAN.G375.15 Capsicum annuum HOM05D006614 ORTHO05D008217 4.6e-197 691.8 582 63.1
Cfa019566 Carpinus fangiana HOM05D006614 ORTHO05D008217 7.9e-197 691.0 574 66.4
Sed0001562 Sechium edule HOM05D006614 ORTHO05D008217 1.0e-196 690.6 595 63.7
Glyma.14G066300 Glycine max HOM05D006614 ORTHO05D008217 5.1e-196 688.3 592 63.3
SGA_v2.0_scaffold34G13782 Striga asiatica HOM05D006614 ORTHO05D008217 1.5e-195 686.8 593 61.9
Phvul.008G231100 Phaseolus vulgaris HOM05D006614 ORTHO05D008217 2.0e-195 686.4 593 62.1
CANSAT35G1108 Cannabis sativa HOM05D006614 ORTHO05D008217 2.5e-195 686.0 617 62.6
AUR62021467 Chenopodium quinoa HOM05D006614 ORTHO05D008217 2.5e-195 686.0 614 59.1
CiPaw.11G160300 Carya illinoinensis HOM05D006614 ORTHO05D008217 7.4e-195 684.5 594 65.7
Cc05_g11080 Coffea canephora HOM05D006614 ORTHO05D008217 7.4e-195 684.5 617 61.9
Oeu061358.1 Olea europaea HOM05D006614 ORTHO05D008217 2.2e-194 682.9 606 60.2
TPR.G25839 Trifolium pratense HOM05D006614 ORTHO05D008217 3.7e-194 682.2 607 60.0
Potri.001G390600 Populus trichocarpa HOM05D006614 ORTHO05D008217 1.1e-193 680.6 612 61.1
SalBow5G0223 Salvia bowleyana HOM05D006614 ORTHO05D008217 5.3e-193 678.3 563 62.0
Medtr5g080700 Medicago truncatula HOM05D006614 ORTHO05D008217 9.1e-193 677.6 625 58.6
VMungo0647G0674 Vigna mungo HOM05D006614 ORTHO05D008217 1.5e-192 676.8 605 59.2
Haze_09323 Corylus avellana HOM05D006614 ORTHO05D008217 4.5e-192 675.2 570 66.3
PSO063G1163 Papaver somniferum HOM05D006614 ORTHO05D008217 7.7e-192 674.5 607 58.2
A05p34510 Brassica napus HOM05D006614 ORTHO05D008217 1.0e-191 674.1 601 59.9
BraA05t22271Z Brassica rapa HOM05D006614 ORTHO05D008217 1.0e-191 674.1 601 59.9
Psat2g179000 Pisum sativum HOM05D006614 ORTHO05D008217 1.0e-191 674.1 610 59.7
PSO421G0295 Papaver somniferum HOM05D006614 ORTHO05D008217 6.5e-191 671.4 611 57.9
Sp3g13110 Schrenkiella parvula HOM05D006614 ORTHO05D008217 6.5e-191 671.4 622 58.4
arahy.Tifrunner.gnm1.ann1.087IU6 Arachis hypogaea HOM05D006614 ORTHO05D008217 1.1e-190 670.6 599 64.1
unitig_747.g21586 Utricularia gibba HOM05D006614 ORTHO05D008217 2.5e-190 669.5 589 57.9
Ca_05900_v3 Cicer arietinum L. HOM05D006614 ORTHO05D008217 3.2e-190 669.1 620 59.8
Thhalv10022322m.g Eutrema salsugineum HOM05D006614 ORTHO05D008217 5.5e-190 668.3 614 59.6
arahy.Tifrunner.gnm1.ann1.UH0U35 Arachis hypogaea HOM05D006614 ORTHO05D008217 2.1e-189 666.4 599 62.9
BcaB06g25331 Brassica carinata HOM05D006614 ORTHO05D008217 2.1e-189 666.4 625 59.7
C05p52250 Brassica napus HOM05D006614 ORTHO05D008217 6.1e-189 664.8 603 59.5
BolC5t33914H Brassica oleracea HOM05D006614 ORTHO05D008217 6.1e-189 664.8 606 60.7
AL3G27220 Arabidopsis lyrata HOM05D006614 ORTHO05D008217 3.9e-188 662.1 546 65.0
Carub.0003s1456 Capsella rubella HOM05D006614 ORTHO05D008217 3.9e-188 662.1 550 63.5
CDE12G0873 Ceratophyllum demersum HOM05D006614 ORTHO05D008217 3.9e-188 662.1 537 65.0
AT3G14900 Arabidopsis thaliana HOM05D006614 ORTHO05D008217 8.8e-188 661.0 627 57.7
QL12p002313 Quercus lobata HOM05D006614 ORTHO05D008217 1.5e-187 660.2 544 65.6
Atru.chr2.2145 Acer truncatum HOM05D006614 ORTHO05D008217 2.6e-187 659.4 536 63.2
Aqoxy1G00012 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 7.4e-187 657.9 539 66.0
BcaB06g29517 Brassica carinata HOM05D006614 ORTHO05D008217 2.8e-186 656.0 544 62.3
ECA240G1555 Erigeron canadensis HOM05D006614 ORTHO05D008217 1.2e-184 650.6 618 61.2
Aa31LG8G2110 Aethionema arabicum HOM05D006614 ORTHO05D008217 2.0e-184 649.8 625 59.0
AUR62010952 Chenopodium quinoa HOM05D006614 ORTHO05D008217 2.0e-184 649.8 618 57.1
MBI12_g10753_MAGBIO Magnolia biondii HOM05D006614 ORTHO05D008217 1.6e-176 623.6 470 66.8
CARHR089840 Cardamine hirsuta HOM05D006614 ORTHO05D008217 1.0e-175 620.9 629 54.5
Hma1.2p1_0290F.1_g114840 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 4.4e-171 605.5 444 68.5
vmacro11940 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 8.0e-165 584.7 563 55.4
ATR0810G004 Amborella trichopoda HOM05D006614 ORTHO05D008217 2.6e-163 579.7 584 55.5
HPP92_015867 Vanilla planifolia HOM05D006614 ORTHO05D008217 4.9e-162 575.5 635 50.1
FAN25G0567 Fragaria x ananassa HOM05D006614 ORTHO05D008217 1.1e-161 574.3 621 52.2
Eucgr.K01881 Eucalyptus grandis HOM05D006614 ORTHO05D008217 1.6e-149 533.9 624 49.7
Os04g0497900 Oryza sativa ssp. japonica HOM05D006614 ORTHO05D008217 5.8e-147 525.4 535 54.8
Zm00001eb078480 Zea mays HOM05D006614 ORTHO05D008217 7.5e-147 525.0 525 53.9
Sabra16G0256000 Salix brachista HOM05D006614 ORTHO05D008217 1.7e-146 523.9 466 59.7
Psat0s3066g0080 Pisum sativum HOM05D006614 ORTHO05D008217 2.8e-141 506.5 428 61.2
Aqoxy3G00116 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 1.7e-130 470.7 414 65.0
Ciclev10023881m.g Citrus clementina HOM05D006614 ORTHO05D008217 2.6e-107 393.7 332 65.4
Glyma.02G250300 Glycine max HOM05D006614 ORTHO05D008217 5.6e-102 375.9 341 62.2
SEGI_22211 Sequoiadendron giganteum HOM05D006614 ORTHO05D008217 1.8e-84 317.8 517 36.8
AagrBONN_evm.TU.Sc2ySwM_228.5094 Anthoceros agrestis HOM05D006614 ORTHO05D008217 5.5e-49 199.9 466 36.1
Pp3c16_3160 Physcomitrium patens HOM05D006614 ORTHO05D008217 2.3e-47 194.5 441 37.4
SMO356G0609 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 1.4e-44 185.3 247 41.3
SMO356G0760 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 1.4e-44 185.3 269 39.4
Mapoly0097s0086 Marchantia polymorpha HOM05D006614 ORTHO05D008217 3.0e-39 167.5 440 28.2
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 4.6e-35 153.7 183 48.1
MD11G1263800 Malus domestica HOM05D006614 ORTHO05D008217 1.5e-30 138.7 90 67.8
Dinv02793 Davidia involucrata HOM05D006614 ORTHO05D008217 8.3e-29 132.9 80 81.2
Psat0s3066g0040 Pisum sativum HOM05D006614 ORTHO05D008217 4.3e-25 120.6 71 77.5
Cfa001947 Carpinus fangiana HOM05D006614 ORTHO05D008217 8.1e-24 116.3 83 68.7
Aqoxy3G00115 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 1.1e-23 115.9 99 66.7
FAN21G3229 Fragaria x ananassa HOM05D006614 ORTHO05D008217 5.2e-23 113.6 79 70.9
HPP92_015860 Vanilla planifolia HOM05D006614 ORTHO05D008217 3.5e-19 100.9 58 74.1
CBR_g47994 Chara braunii HOM05D006614 ORTHO05D008217 4.7e-16 90.5 270 27.4


User provided reference genes

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