Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0007580 Simmondsia chinensis HOM05D000718 ORTHO05D007431 1.3e-93 346.3 167 100.0
Ah.04g164270 Amaranthus hybridus HOM05D000718 ORTHO05D007431 5.4e-71 271.2 162 77.2
EL10Ac4g08344 Beta vulgaris HOM05D000718 ORTHO05D007431 2.5e-68 262.3 162 74.1
Dinv18364 Davidia involucrata HOM05D000718 ORTHO05D007431 4.3e-68 261.5 164 73.2
Hund02254 Selenicereus undatus HOM05D000718 ORTHO05D007431 4.3e-68 261.5 162 75.3
AUR62019575 Chenopodium quinoa HOM05D000718 ORTHO05D007431 7.3e-68 260.8 162 72.8
AUR62042779 Chenopodium quinoa HOM05D000718 ORTHO05D007431 1.3e-67 260.0 162 72.8
PGR031G2045 Punica granatum HOM05D000718 ORTHO05D007431 3.6e-67 258.5 163 72.4
THA.LOC104822564 Tarenaya hassleriana HOM05D000718 ORTHO05D007431 3.4e-65 251.9 163 69.3
Lj1A829G32 Lonicera japonica HOM05D000718 ORTHO05D007431 4.5e-65 251.5 164 68.9
vmacro23465 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 4.5e-65 251.5 167 71.9
CSS0043856 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 2.9e-64 248.8 165 70.9
CARHR089850 Cardamine hirsuta HOM05D000718 ORTHO05D007431 2.9e-64 248.8 163 68.1
Rhsim06G0207800 Rhododendron simsii HOM05D000718 ORTHO05D007431 4.9e-64 248.1 165 69.7
CANSAT35G0289 Cannabis sativa HOM05D000718 ORTHO05D007431 6.4e-64 247.7 162 67.9
Aa31LG8G2120 Aethionema arabicum HOM05D000718 ORTHO05D007431 8.4e-64 247.3 163 68.1
PGSC0003DMG400007071 Solanum tuberosum HOM05D000718 ORTHO05D007431 8.4e-64 247.3 164 70.1
Eucgr.K01884 Eucalyptus grandis HOM05D000718 ORTHO05D007431 1.4e-63 246.5 163 68.7
Actinidia12577 Actinidia chinensis HOM05D000718 ORTHO05D007431 1.9e-63 246.1 165 67.9
RcHm_v2.0_Chr5g0030941 Rosa chinensis HOM05D000718 ORTHO05D007431 2.4e-63 245.7 162 67.3
Carub.0003s1457 Capsella rubella HOM05D000718 ORTHO05D007431 4.2e-63 245.0 162 66.7
Nitab4.5_0006953g0050 Nicotiana tabacum HOM05D000718 ORTHO05D007431 4.2e-63 245.0 164 70.1
Solyc07g062450.3 Solanum lycopersicum HOM05D000718 ORTHO05D007431 5.4e-63 244.6 164 69.5
Sopen07g030690 Solanum pennellii HOM05D000718 ORTHO05D007431 5.4e-63 244.6 164 69.5
Thhalv10020708m.g Eutrema salsugineum HOM05D000718 ORTHO05D007431 7.1e-63 244.2 163 66.3
MD03G1243500 Malus domestica HOM05D000718 ORTHO05D007431 9.3e-63 243.8 162 67.9
Sp3g13120 Schrenkiella parvula HOM05D000718 ORTHO05D007431 9.3e-63 243.8 163 66.3
Haze_09324 Corylus avellana HOM05D000718 ORTHO05D007431 1.6e-62 243.0 163 69.3
Cfa019567 Carpinus fangiana HOM05D000718 ORTHO05D007431 2.7e-62 242.3 163 68.1
AT3G14910 Arabidopsis thaliana HOM05D000718 ORTHO05D007431 3.5e-62 241.9 163 66.9
A05p34500 Brassica napus HOM05D000718 ORTHO05D007431 3.5e-62 241.9 163 66.9
BraA05t22270Z Brassica rapa HOM05D000718 ORTHO05D007431 3.5e-62 241.9 163 66.9
Nitab4.5_0003565g0040 Nicotiana tabacum HOM05D000718 ORTHO05D007431 4.6e-62 241.5 164 68.9
arahy.Tifrunner.gnm1.ann1.STN4DM Arachis hypogaea HOM05D000718 ORTHO05D007431 7.9e-62 240.7 163 66.9
HanXRQChr15g0476211 Helianthus annuus HOM05D000718 ORTHO05D007431 7.9e-62 240.7 164 70.7
Prupe.4G164800 Prunus persica HOM05D000718 ORTHO05D007431 7.9e-62 240.7 162 66.7
AL3G27230 Arabidopsis lyrata HOM05D000718 ORTHO05D007431 1.0e-61 240.4 163 65.0
arahy.Tifrunner.gnm1.ann1.6IHZ0U Arachis hypogaea HOM05D000718 ORTHO05D007431 1.0e-61 240.4 163 66.3
BcaB06g25332 Brassica carinata HOM05D000718 ORTHO05D007431 1.0e-61 240.4 163 65.0
CiPaw.11G160400 Carya illinoinensis HOM05D000718 ORTHO05D007431 1.0e-61 240.4 163 66.3
C05p52240 Brassica napus HOM05D000718 ORTHO05D007431 1.3e-61 240.0 163 66.3
FAN16G1727 Fragaria x ananassa HOM05D000718 ORTHO05D007431 1.8e-61 239.6 162 66.0
FvH4_3g18310 Fragaria vesca HOM05D000718 ORTHO05D007431 2.3e-61 239.2 162 66.0
Lsat_1_v5_gn_9_99900 Lactuca sativa HOM05D000718 ORTHO05D007431 5.1e-61 238.0 164 70.7
FAN11G0057 Fragaria x ananassa HOM05D000718 ORTHO05D007431 6.7e-61 237.7 162 66.0
Lj3g0001987 Lotus japonicus HOM05D000718 ORTHO05D007431 6.7e-61 237.7 162 69.1
BolC5t33913H Brassica oleracea HOM05D000718 ORTHO05D007431 8.7e-61 237.3 163 65.6
Peaxi162Scf00111g01475 Petunia axillaris HOM05D000718 ORTHO05D007431 8.7e-61 237.3 164 66.5
FAN21G3716 Fragaria x ananassa HOM05D000718 ORTHO05D007431 1.1e-60 236.9 162 65.4
FAN25G1161 Fragaria x ananassa HOM05D000718 ORTHO05D007431 1.1e-60 236.9 162 65.4
DCAR_013156 Daucus carota HOM05D000718 ORTHO05D007431 4.3e-60 235.0 163 63.8
GSVIVG01014199001 Vitis vinifera HOM05D000718 ORTHO05D007431 4.3e-60 235.0 165 67.3
Migut.H01998 Erythranthe guttata HOM05D000718 ORTHO05D007431 5.6e-60 234.6 169 65.7
Oeu025333.1 Olea europaea HOM05D000718 ORTHO05D007431 5.6e-60 234.6 170 65.9
CAN.G375.14 Capsicum annuum HOM05D000718 ORTHO05D007431 2.8e-59 232.3 164 65.2
Manes.03G101200 Manihot esculenta HOM05D000718 ORTHO05D007431 4.8e-59 231.5 161 62.1
Nn1g04439 Nelumbo nucifera HOM05D000718 ORTHO05D007431 4.8e-59 231.5 163 64.4
Ca_12194_v3 Cicer arietinum L. HOM05D000718 ORTHO05D007431 1.4e-58 229.9 162 63.0
ECA240G1747 Erigeron canadensis HOM05D000718 ORTHO05D007431 1.4e-58 229.9 165 65.5
SGA_v2.0_scaffold130G34293 Striga asiatica HOM05D000718 ORTHO05D007431 1.8e-58 229.6 169 64.5
Cc05_g11090 Coffea canephora HOM05D000718 ORTHO05D007431 3.1e-58 228.8 164 65.2
MELO3C025639.2 Cucumis melo HOM05D000718 ORTHO05D007431 4.0e-58 228.4 163 65.0
COL.COLO4_17547 Corchorus olitorius HOM05D000718 ORTHO05D007431 5.3e-58 228.0 167 62.9
Lalb_Chr01g0006831 Lupinus albus HOM05D000718 ORTHO05D007431 5.3e-58 228.0 162 63.6
MSTRG.14233 Avicennia marina HOM05D000718 ORTHO05D007431 2.6e-57 225.7 169 64.5
Psat0s1037g0040 Pisum sativum HOM05D000718 ORTHO05D007431 3.4e-57 225.3 162 62.3
ClCG11G017460 Citrullus lanatus HOM05D000718 ORTHO05D007431 4.5e-57 224.9 163 63.8
Potri.001G390700 Populus trichocarpa HOM05D000718 ORTHO05D007431 5.8e-57 224.6 163 63.2
Atru.chr2.2147 Acer truncatum HOM05D000718 ORTHO05D007431 9.9e-57 223.8 162 59.9
PSO782G3001 Papaver somniferum HOM05D000718 ORTHO05D007431 9.9e-57 223.8 165 63.6
TWI39G0589 Tripterygium wilfordii HOM05D000718 ORTHO05D007431 1.3e-56 223.4 163 60.7
CsaV3_4G033110 Cucumis sativus L. HOM05D000718 ORTHO05D007431 2.2e-56 222.6 163 63.2
VMungo1127G0879 Vigna mungo HOM05D000718 ORTHO05D007431 2.2e-56 222.6 162 61.1
Duzib187G1570 Durio zibethinus HOM05D000718 ORTHO05D007431 6.4e-56 221.1 167 62.3
PSO478G1672 Papaver somniferum HOM05D000718 ORTHO05D007431 6.4e-56 221.1 165 63.0
TPR.G16488 Trifolium pratense HOM05D000718 ORTHO05D007431 6.4e-56 221.1 162 62.3
SalBow7G4376 Salvia bowleyana HOM05D000718 ORTHO05D007431 8.4e-56 220.7 170 60.6
Gohir.A01G054400 Gossypium hirsutum HOM05D000718 ORTHO05D007431 1.4e-55 219.9 167 59.3
SalBow7G4178 Salvia bowleyana HOM05D000718 ORTHO05D007431 1.9e-55 219.5 170 60.0
Thecc.07G115900 Theobroma cacao HOM05D000718 ORTHO05D007431 1.9e-55 219.5 166 61.4
Gohir.D01G042724 Gossypium hirsutum HOM05D000718 ORTHO05D007431 2.4e-55 219.2 167 58.7
Gorai.002G054700 Gossypium raimondii HOM05D000718 ORTHO05D007431 2.4e-55 219.2 167 58.7
Sed0007644 Sechium edule HOM05D000718 ORTHO05D007431 3.2e-55 218.8 162 58.6
Phvul.011G162200 Phaseolus vulgaris HOM05D000718 ORTHO05D007431 5.5e-55 218.0 162 59.3
Thecc.07G114900 Theobroma cacao HOM05D000718 ORTHO05D007431 7.1e-55 217.6 167 59.9
Glyma.06G228900 Glycine max HOM05D000718 ORTHO05D007431 9.3e-55 217.2 164 60.4
Medtr8g464030 Medicago truncatula HOM05D000718 ORTHO05D007431 2.7e-54 215.7 164 59.1
Psat3g077000 Pisum sativum HOM05D000718 ORTHO05D007431 2.7e-54 215.7 162 59.3
Glyma.12G157600 Glycine max HOM05D000718 ORTHO05D007431 3.9e-53 211.8 163 60.1
QL08p026242 Quercus lobata HOM05D000718 ORTHO05D007431 6.7e-53 211.1 161 63.4
Aqoxy4G00321 Aquilegia oxysepala HOM05D000718 ORTHO05D007431 3.7e-51 205.3 172 57.0
MBI07_g09566_MAGBIO Magnolia biondii HOM05D000718 ORTHO05D007431 3.4e-49 198.7 168 57.1
Lalb_Chr03g0031171 Lupinus albus HOM05D000718 ORTHO05D007431 2.9e-48 195.7 162 56.8
CDE04G1093 Ceratophyllum demersum HOM05D000718 ORTHO05D007431 6.5e-48 194.5 163 57.7
Nn1g09174 Nelumbo nucifera HOM05D000718 ORTHO05D007431 4.2e-47 191.8 144 61.1
SHI27609 Sapria himalayana HOM05D000718 ORTHO05D007431 5.1e-45 184.9 165 49.1
PGSC0003DMG400011947 Solanum tuberosum HOM05D000718 ORTHO05D007431 1.6e-43 179.9 120 70.0
TAR627G0847 Trochodendron aralioides HOM05D000718 ORTHO05D007431 4.5e-41 171.8 127 63.8
ATR0602G196 Amborella trichopoda HOM05D000718 ORTHO05D007431 7.6e-41 171.0 164 53.7
unitig_52.g17395 Utricularia gibba HOM05D000718 ORTHO05D007431 1.3e-40 170.2 169 52.1
CSS0021542 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 2.2e-40 169.5 167 51.5
Cpa.g.sc77.7 Carica papaya HOM05D000718 ORTHO05D007431 3.6e-38 162.2 119 66.4
MD11G1263700 Malus domestica HOM05D000718 ORTHO05D007431 4.6e-38 161.8 120 64.2
unitig_26.g9517 Utricularia gibba HOM05D005139 ORTHO05D006125 1.8e-37 159.8 183 44.8
SEGI_16322 Sequoiadendron giganteum HOM05D000718 ORTHO05D007431 1.5e-36 156.8 158 47.5
Thecc.07G115200 Theobroma cacao HOM05D000718 ORTHO05D007431 2.2e-35 152.9 128 56.2
HPP92_023429 Vanilla planifolia HOM05D000718 ORTHO05D007431 1.1e-34 150.6 169 47.3
CSS0014195 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 2.9e-32 142.5 118 61.0
vmacro11939 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 5.0e-32 141.7 163 48.5
Thecc.07G114700 Theobroma cacao HOM05D000718 ORTHO05D007431 5.7e-28 128.3 108 57.4
Os09g0315800 Oryza sativa ssp. japonica HOM05D000718 ORTHO05D007431 2.0e-25 119.8 178 46.1
Pp3c4_25540 Physcomitrium patens HOM05D000718 ORTHO05D007431 4.4e-20 102.1 155 37.4
AagrBONN_evm.TU.Sc2ySwM_228.1801 Anthoceros agrestis HOM05D000718 ORTHO05D007431 1.1e-18 97.4 152 38.8
Thecc.07G114000 Theobroma cacao HOM05D000718 ORTHO05D007431 4.1e-18 95.5 104 47.1
Mapoly0061s0004 Marchantia polymorpha HOM05D000718 ORTHO05D007431 5.3e-18 95.1 147 38.1
BcaB06g29518 Brassica carinata HOM05D000718 ORTHO05D002712 9.1e-18 94.4 64 67.2
MD11G1263600 Malus domestica HOM05D000718 ORTHO05D007431 2.3e-13 79.7 45 71.1
SMO367G0522 Selaginella moellendorffii HOM05D000718 ORTHO05D007431 6.7e-13 78.2 153 34.0
vmacro23384 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 3.3e-12 75.9 46 69.6
CAN.G713.20 Capsicum annuum HOM05D000718 ORTHO05D007431 3.1e-10 69.3 46 65.2
Zm00001eb309730 Zea mays HOM05D000718 ORTHO05D007431 3.6e-06 55.8 46 54.3


User provided reference genes

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