Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0006510 Simmondsia chinensis HOM05D005485 ORTHO05D007343 1.4e-154 550.1 391 100.0
Sc16g0006540 Simmondsia chinensis HOM05D005485 ORTHO05D007343 2.7e-36 157.1 203 55.7
Sc16g0006490 Simmondsia chinensis HOM05D005485 ORTHO05D007343 1.4e-32 144.8 123 65.9
Sc16g0006450 Simmondsia chinensis HOM05D005485 ORTHO05D007343 1.8e-32 144.4 128 64.8
Sc16g0006460 Simmondsia chinensis HOM05D005485 ORTHO05D007343 1.2e-31 141.7 123 65.0
Sc16g0006410 Simmondsia chinensis HOM05D005485 ORTHO05D007343 6.8e-24 115.9 84 72.6
Sc03g0008990 Simmondsia chinensis HOM05D005485 ORTHO05D007343 2.0e-15 87.8 83 57.8
EL10Ac3g05678 Beta vulgaris HOM05D005485 ORTHO05D007343 3.8e-14 83.6 76 52.6
Ah.06g183040 Amaranthus hybridus HOM05D005485 ORTHO05D007343 1.4e-13 81.6 76 48.7
Ah.12g053520 Amaranthus hybridus HOM05D005485 ORTHO05D007343 1.4e-13 81.6 77 45.5
Ah.12g053560 Amaranthus hybridus HOM05D005485 ORTHO05D007343 1.4e-13 81.6 77 45.5
Ah.12g053500 Amaranthus hybridus HOM05D005485 ORTHO05D007343 4.2e-13 80.1 76 46.1
EL10Ac4g07981 Beta vulgaris HOM05D005485 ORTHO05D007343 4.2e-13 80.1 90 47.8
EL10Ac4g07717 Beta vulgaris HOM05D005485 ORTHO05D007343 5.4e-13 79.7 77 51.9
EL10Ac6g15586 Beta vulgaris HOM05D005485 ORTHO05D007343 9.3e-13 79.0 107 40.2
Sc03g0008940 Simmondsia chinensis HOM05D005485 ORTHO05D007343 9.3e-13 79.0 83 54.2
Ah.03g136680 Amaranthus hybridus HOM05D005485 ORTHO05D007343 1.6e-12 78.2 77 50.6
Ah.06g182180 Amaranthus hybridus HOM05D005485 ORTHO05D007343 1.6e-12 78.2 77 50.6
EL10Ac3g06092 Beta vulgaris HOM05D005485 ORTHO05D007343 2.7e-12 77.4 105 38.1
AUR62015643 Chenopodium quinoa HOM05D005485 ORTHO05D026998 2.7e-12 77.4 71 53.5
AUR62020557 Chenopodium quinoa HOM05D005485 ORTHO05D007343 2.7e-12 77.4 71 53.5
EL10Ac4g07715 Beta vulgaris HOM05D005485 ORTHO05D010325 4.6e-12 76.6 75 50.7
Ah.14g079930 Amaranthus hybridus HOM05D005485 ORTHO05D007343 6.0e-12 76.3 77 42.9
Ah.14g079940 Amaranthus hybridus HOM05D005485 ORTHO05D007343 6.0e-12 76.3 77 42.9
Hund23309 Selenicereus undatus HOM05D005485 ORTHO05D007343 1.3e-11 75.1 77 48.1
Sc16g0006480 Simmondsia chinensis HOM05D005485 ORTHO05D007343 3.9e-11 73.6 68 58.8
Ah.02g116590 Amaranthus hybridus HOM05D005485 ORTHO05D007343 6.6e-11 72.8 85 44.7
EL10Ac4g07712 Beta vulgaris HOM05D005485 ORTHO05D007343 6.6e-11 72.8 77 50.6
EL10Ac4g07974 Beta vulgaris HOM05D005485 ORTHO05D026998 6.6e-11 72.8 71 50.7
Hund23314 Selenicereus undatus HOM05D005485 ORTHO05D007343 8.7e-11 72.4 77 46.8
AUR62020370 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.1e-10 72.0 69 47.8
AUR62035968 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.1e-10 72.0 78 42.3
AUR62034285 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.5e-10 71.6 75 45.3
AUR62000944 Chenopodium quinoa HOM05D005485 ORTHO05D007343 2.5e-10 70.9 73 46.6
AUR62020319 Chenopodium quinoa HOM05D005485 ORTHO05D007343 2.5e-10 70.9 69 47.8
AUR62031850 Chenopodium quinoa HOM05D005485 ORTHO05D007343 3.3e-10 70.5 69 47.8
AUR62022538 Chenopodium quinoa HOM05D005485 ORTHO05D007343 4.3e-10 70.1 80 42.5
AUR62044278 Chenopodium quinoa HOM05D005485 ORTHO05D007343 4.3e-10 70.1 80 42.5
AUR62004787 Chenopodium quinoa HOM05D005485 ORTHO05D007343 5.6e-10 69.7 78 47.4
EL10Ac4g08008 Beta vulgaris HOM05D005485 ORTHO05D007343 9.6e-10 68.9 120 39.2
EL10Ac4g08005 Beta vulgaris HOM05D005485 ORTHO05D007343 2.8e-09 67.4 98 41.8
AUR62020336 Chenopodium quinoa HOM05D003198 ORTHO05D003716 4.8e-09 66.6 94 44.7
Sc03g0009090 Simmondsia chinensis HOM05D005485 ORTHO05D007343 6.2e-09 66.2 79 51.9
AUR62043968 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.1e-08 65.5 78 39.7
AUR62020485 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.4e-08 65.1 71 50.7
EL10Ac4g09276 Beta vulgaris HOM05D005485 ORTHO05D007343 1.8e-08 64.7 65 44.6
AUR62015889 Chenopodium quinoa HOM05D005485 ORTHO05D007343 5.3e-08 63.2 96 40.6
Ah.06g182120 Amaranthus hybridus HOM05D005485 ORTHO05D007343 1.2e-07 62.0 70 42.9
Ah.11g046570 Amaranthus hybridus HOM05D005485 ORTHO05D007343 1.5e-07 61.6 63 39.7
AUR62035401 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.5e-07 61.6 84 45.2
Ah.16g108490 Amaranthus hybridus HOM05D005485 ORTHO05D007343 2.0e-07 61.2 68 47.1
AUR62020318 Chenopodium quinoa HOM05D005485 ORTHO05D007343 2.0e-07 61.2 71 45.1
Sc03g0009010 Simmondsia chinensis HOM05D005485 ORTHO05D007343 2.0e-07 61.2 76 43.4
AUR62020486 Chenopodium quinoa HOM05D005485 ORTHO05D007343 2.6e-07 60.8 73 45.2
AUR62001099 Chenopodium quinoa HOM05D005485 ORTHO05D007343 7.6e-07 59.3 81 39.5
AUR62020371 Chenopodium quinoa HOM05D005485 ORTHO05D007343 7.6e-07 59.3 71 49.3
EL10Ac3g05160 Beta vulgaris HOM05D007624 ORTHO05D010285 2.9e-06 57.4 54 51.9
Hund23381 Selenicereus undatus HOM05D000002 ORTHO05D009184 2.9e-06 57.4 63 44.4


User provided reference genes

Program Settings