Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0006440 Simmondsia chinensis HOM05D005485 ORTHO05D007343 7.8e-163 577.0 281 100.0
Sc16g0006520 Simmondsia chinensis HOM05D005485 ORTHO05D007343 7.2e-76 288.1 186 75.3
Sc16g0006460 Simmondsia chinensis HOM05D005485 ORTHO05D007343 1.0e-66 257.7 198 67.7
Sc16g0006550 Simmondsia chinensis HOM05D005485 ORTHO05D007343 3.5e-54 216.1 165 63.6
Sc03g0008990 Simmondsia chinensis HOM05D005485 ORTHO05D007343 4.7e-51 205.7 187 55.1
Sc03g0008940 Simmondsia chinensis HOM05D005485 ORTHO05D007343 1.2e-49 201.1 187 54.0
EL10Ac3g05678 Beta vulgaris HOM05D005485 ORTHO05D007343 9.9e-41 171.4 193 46.1
Sc16g0006490 Simmondsia chinensis HOM05D005485 ORTHO05D007343 4.1e-39 166.0 206 45.1
Hund21254 Selenicereus undatus HOM05D005485 ORTHO05D007343 1.9e-36 157.1 179 45.3
Sc03g0009010 Simmondsia chinensis HOM05D005485 ORTHO05D007343 1.9e-36 157.1 183 45.4
Sc03g0009030 Simmondsia chinensis HOM05D005485 ORTHO05D007343 9.5e-36 154.8 185 47.0
Hund21258 Selenicereus undatus HOM05D005485 ORTHO05D007343 2.1e-35 153.7 179 45.3
Ah.12g053550 Amaranthus hybridus HOM05D005485 ORTHO05D007343 2.9e-32 143.3 181 42.5
EL10Ac4g07974 Beta vulgaris HOM05D005485 ORTHO05D026998 6.4e-32 142.1 180 42.8
AUR62015643 Chenopodium quinoa HOM05D005485 ORTHO05D026998 9.2e-31 138.3 193 38.9
Hund23309 Selenicereus undatus HOM05D005485 ORTHO05D007343 6.0e-30 135.6 187 40.6
AUR62038097 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.3e-29 134.4 184 38.6
Ah.12g053500 Amaranthus hybridus HOM05D005485 ORTHO05D007343 1.7e-29 134.0 210 36.2
Ah.12g053520 Amaranthus hybridus HOM05D005485 ORTHO05D007343 1.7e-29 134.0 181 42.0
Hund23311 Selenicereus undatus HOM05D005485 ORTHO05D007343 3.0e-29 133.3 186 38.7
Ah.06g183040 Amaranthus hybridus HOM05D005485 ORTHO05D007343 8.7e-29 131.7 171 42.7
Hund21259 Selenicereus undatus HOM05D005485 ORTHO05D007343 1.5e-28 131.0 173 41.0
Hund23314 Selenicereus undatus HOM05D005485 ORTHO05D007343 2.5e-28 130.2 187 39.6
AUR62044278 Chenopodium quinoa HOM05D005485 ORTHO05D007343 3.3e-28 129.8 201 37.3
AUR62034285 Chenopodium quinoa HOM05D005485 ORTHO05D007343 4.3e-28 129.4 201 36.3
EL10Ac4g08009 Beta vulgaris HOM05D005485 ORTHO05D007343 7.3e-28 128.6 182 38.5
EL10Ac6g15586 Beta vulgaris HOM05D005485 ORTHO05D007343 2.1e-27 127.1 175 41.1
Ah.07g198250 Amaranthus hybridus HOM05D005485 ORTHO05D007343 1.1e-26 124.8 180 39.4
Ah.14g079930 Amaranthus hybridus HOM05D005485 ORTHO05D007343 1.1e-26 124.8 183 38.8
EL10Ac4g09247 Beta vulgaris HOM05D005485 ORTHO05D007343 1.1e-26 124.8 234 32.9
Ah.14g079940 Amaranthus hybridus HOM05D005485 ORTHO05D007343 3.1e-26 123.2 183 37.7
AUR62035968 Chenopodium quinoa HOM05D005485 ORTHO05D007343 3.1e-26 123.2 209 35.9
Ah.03g144460 Amaranthus hybridus HOM05D005485 ORTHO05D007343 6.9e-26 122.1 194 34.0
Ah.07g198280 Amaranthus hybridus HOM05D005485 ORTHO05D007343 1.5e-25 120.9 217 35.5
EL10Ac4g07717 Beta vulgaris HOM05D005485 ORTHO05D007343 5.8e-25 119.0 190 34.7
AUR62020371 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.3e-24 117.9 191 32.5
Ah.16g108490 Amaranthus hybridus HOM05D005485 ORTHO05D007343 1.7e-24 117.5 188 35.6
AUR62005063 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.7e-24 117.5 191 38.2
AUR62029296 Chenopodium quinoa HOM05D005485 ORTHO05D007343 2.2e-24 117.1 191 33.5
AUR62020370 Chenopodium quinoa HOM05D005485 ORTHO05D007343 2.9e-24 116.7 189 34.9
EL10Ac4g07712 Beta vulgaris HOM05D005485 ORTHO05D007343 3.8e-24 116.3 163 38.7
AUR62001099 Chenopodium quinoa HOM05D005485 ORTHO05D007343 3.8e-24 116.3 181 34.8
AUR62020336 Chenopodium quinoa HOM05D003198 ORTHO05D003716 1.1e-23 114.8 190 31.6
EL10Ac4g07981 Beta vulgaris HOM05D005485 ORTHO05D007343 1.4e-23 114.4 156 40.4
Ah.07g199850 Amaranthus hybridus HOM05D005485 ORTHO05D007343 1.9e-23 114.0 160 40.6
EL10Ac3g06092 Beta vulgaris HOM05D005485 ORTHO05D007343 1.9e-23 114.0 159 42.1
EL10Ac3g07381 Beta vulgaris HOM05D005485 ORTHO05D007343 1.6e-22 110.9 193 36.3
Ah.06g182180 Amaranthus hybridus HOM05D005485 ORTHO05D007343 3.5e-22 109.8 181 34.8
EL10Ac4g07978 Beta vulgaris HOM05D005485 ORTHO05D007343 4.6e-22 109.4 170 37.6
AUR62020486 Chenopodium quinoa HOM05D005485 ORTHO05D007343 6.0e-22 109.0 177 35.0
Sc03g0009060 Simmondsia chinensis HOM05D005485 ORTHO05D007343 1.0e-21 108.2 113 46.9
AUR62043968 Chenopodium quinoa HOM05D005485 ORTHO05D007343 8.7e-21 105.1 132 43.2
Ah.02g116590 Amaranthus hybridus HOM05D005485 ORTHO05D007343 1.1e-20 104.8 199 34.2
Sc16g0006480 Simmondsia chinensis HOM05D005485 ORTHO05D007343 2.1e-19 100.5 112 53.6
AUR62035401 Chenopodium quinoa HOM05D005485 ORTHO05D007343 8.1e-19 98.6 188 30.9
Ah.06g182120 Amaranthus hybridus HOM05D005485 ORTHO05D007343 1.1e-18 98.2 177 34.5
AUR62020365 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.4e-18 97.8 164 32.9
AUR62000944 Chenopodium quinoa HOM05D005485 ORTHO05D007343 2.4e-18 97.1 154 37.7
Ah.12g053540 Amaranthus hybridus HOM05D005485 ORTHO05D007343 3.1e-18 96.7 155 36.8
AUR62015844 Chenopodium quinoa HOM05D005485 ORTHO05D007343 3.1e-18 96.7 188 33.0
EL10Ac4g08005 Beta vulgaris HOM05D005485 ORTHO05D007343 4.0e-18 96.3 169 34.3
Sc16g0006400 Simmondsia chinensis HOM05D005485 ORTHO05D007343 9.0e-18 95.1 63 73.0
AUR62022538 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.3e-16 91.3 186 31.2
Hund30583 Selenicereus undatus HOM05D005485 ORTHO05D007343 1.3e-16 91.3 112 42.0
Ah.14g080010 Amaranthus hybridus HOM05D005485 ORTHO05D007343 3.8e-16 89.7 122 42.6
AUR62020487 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.9e-15 87.4 151 33.1
AUR62035354 Chenopodium quinoa HOM05D000264 ORTHO05D000152 1.9e-15 87.4 186 30.1
Ah.12g062530 Amaranthus hybridus HOM05D000264 ORTHO05D000152 2.4e-15 87.0 197 28.9
Hund14197 Selenicereus undatus HOM05D005485 ORTHO05D007343 2.4e-15 87.0 137 35.0
AUR62015889 Chenopodium quinoa HOM05D005485 ORTHO05D007343 3.2e-15 86.7 186 30.6
AUR62031850 Chenopodium quinoa HOM05D005485 ORTHO05D007343 9.3e-15 85.1 181 32.0
EL10Ac3g06720 Beta vulgaris HOM05D000264 ORTHO05D000152 1.2e-14 84.7 186 29.6
Ah.14g079970 Amaranthus hybridus HOM05D005485 ORTHO05D007343 2.7e-14 83.6 164 36.0
AUR62010290 Chenopodium quinoa HOM05D005485 ORTHO05D007343 2.7e-14 83.6 188 29.3
AUR62035892 Chenopodium quinoa HOM05D000264 ORTHO05D000152 4.6e-14 82.8 186 29.6
RhsimUnG0230300 Rhododendron simsii HOM05D000264 ORTHO05D000152 1.0e-13 81.6 213 28.2
vmacro19094 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 8.7e-13 78.6 193 29.0
AUR62004787 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.1e-12 78.2 183 27.9
Rhsim07G0250900 Rhododendron simsii HOM05D000264 ORTHO05D000152 2.5e-12 77.0 197 31.0
Hund23312 Selenicereus undatus HOM05D005485 ORTHO05D007343 1.3e-11 74.7 202 26.2
AUR62020556 Chenopodium quinoa HOM05D005485 ORTHO05D026998 1.1e-10 71.6 147 30.6
AUR62020319 Chenopodium quinoa HOM05D005485 ORTHO05D007343 5.3e-10 69.3 189 27.5
Hund23316 Selenicereus undatus HOM05D005485 ORTHO05D007343 6.9e-10 68.9 173 27.7
Ah.11g046570 Amaranthus hybridus HOM05D005485 ORTHO05D007343 9.0e-10 68.6 190 29.5
AUR62001098 Chenopodium quinoa HOM05D005485 ORTHO05D007343 2.0e-09 67.4 190 27.9
RhsimUnG0050600 Rhododendron simsii HOM05D000264 ORTHO05D000152 2.0e-09 67.4 216 26.9
Rhsim04G0034200 Rhododendron simsii HOM05D000264 ORTHO05D000152 9.9e-09 65.1 185 26.5
AUR62032022 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.3e-08 64.7 185 29.7
Sc16g0006420 Simmondsia chinensis HOM05D005485 ORTHO05D007343 1.7e-08 64.3 82 42.7
AUR62014162 Chenopodium quinoa HOM05D005485 ORTHO05D007343 2.2e-08 63.9 208 28.4
Zm00001eb323050 Zea mays HOM05D000264 ORTHO05D000152 2.2e-08 63.9 181 28.7
AUR62020318 Chenopodium quinoa HOM05D005485 ORTHO05D007343 8.4e-08 62.0 129 27.1
AUR62044256 Chenopodium quinoa HOM05D005485 ORTHO05D007343 8.4e-08 62.0 205 29.3
Os11g0251400 Oryza sativa ssp. japonica HOM05D000264 ORTHO05D000152 1.1e-07 61.6 168 30.4
Rhsim04G0028400 Rhododendron simsii HOM05D000264 ORTHO05D013505 1.4e-07 61.2 176 28.4
Eucgr.D01232 Eucalyptus grandis HOM05D000264 ORTHO05D000152 2.4e-07 60.5 204 28.9
Cc11_g07200 Coffea canephora HOM05D000264 ORTHO05D000152 3.2e-07 60.1 153 31.4
Prupe.4G145100 Prunus persica HOM05D000264 ORTHO05D000152 3.2e-07 60.1 199 26.6
BcaC09g49234 Brassica carinata HOM05D000264 ORTHO05D000152 4.2e-07 59.7 175 29.1
MBI02_g18415_MAGBIO Magnolia biondii HOM05D000264 ORTHO05D000152 5.5e-07 59.3 187 25.7
BcaB04g21355 Brassica carinata HOM05D000264 ORTHO05D000152 7.1e-07 58.9 175 28.0
AUR62005437 Chenopodium quinoa HOM05D005485 ORTHO05D007343 9.3e-07 58.5 79 35.4
Ah.16g103630 Amaranthus hybridus HOM05D000043 ORTHO05D002702 3.5e-06 56.6 79 32.9
AUR62043844 Chenopodium quinoa HOM05D000448 ORTHO05D000291 3.5e-06 56.6 194 25.8
AL3G14640 Arabidopsis lyrata HOM05D000264 ORTHO05D000152 6.0e-06 55.8 194 25.3
Eucgr.D01267 Eucalyptus grandis HOM05D000264 ORTHO05D000152 6.0e-06 55.8 158 27.8


User provided reference genes

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