Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0006160 Simmondsia chinensis HOM05D000051 ORTHO05D000015 3.7e-120 434.9 215 100.0
PGSC0003DMG401001040 Solanum tuberosum HOM05D000051 ORTHO05D000015 2.4e-18 96.7 127 41.7
Sopen07g032410 Solanum pennellii HOM05D000051 ORTHO05D000015 2.0e-17 93.6 127 40.9
Dinv40730 Davidia involucrata HOM05D000051 ORTHO05D000015 9.9e-17 91.3 150 38.0
CAN.G337.100 Capsicum annuum HOM05D000051 ORTHO05D000015 3.8e-16 89.4 127 40.2
Rhsim04G0001300 Rhododendron simsii HOM05D000051 ORTHO05D000015 8.4e-16 88.2 131 38.2
Hma1.2p1_1609F.1_g293440 Hydrangea macrophylla HOM05D000051 ORTHO05D000015 3.2e-15 86.3 136 36.8
Oeu007604.1 Olea europaea HOM05D000051 ORTHO05D000015 5.6e-12 75.5 150 36.0
Lj3g0021941 Lotus japonicus HOM05D000051 ORTHO05D000015 7.4e-12 75.1 141 36.2
Lj3g0004141 Lotus japonicus HOM05D000051 ORTHO05D000015 3.6e-11 72.8 137 35.0
QL08p012538 Quercus lobata HOM05D000051 ORTHO05D000015 2.4e-10 70.1 140 35.0
QL01p041783 Quercus lobata HOM05D000051 ORTHO05D000015 3.1e-10 69.7 103 41.7
QL08p012534 Quercus lobata HOM05D000051 ORTHO05D000015 6.9e-10 68.6 130 33.8
QL01p041755 Quercus lobata HOM05D000051 ORTHO05D000015 1.2e-09 67.8 101 38.6
QL01p041788 Quercus lobata HOM05D000051 ORTHO05D000015 2.6e-09 66.6 130 36.9
DCAR_022537 Daucus carota HOM05D000051 ORTHO05D000015 3.4e-09 66.2 124 37.1
TPR.G24740 Trifolium pratense HOM05D000051 ORTHO05D000015 3.4e-09 66.2 133 31.6
Cfa000228 Carpinus fangiana HOM05D000051 ORTHO05D000015 2.2e-08 63.5 114 35.1
MSTRG.15164 Avicennia marina HOM05D000051 ORTHO05D000015 2.9e-08 63.2 129 34.1
Dinv18383 Davidia involucrata HOM05D000051 ORTHO05D008292 4.9e-08 62.4 123 33.3
QL05p074475 Quercus lobata HOM05D000051 ORTHO05D000015 4.9e-08 62.4 151 30.5
QL05p074600 Quercus lobata HOM05D000051 ORTHO05D000015 6.4e-08 62.0 115 33.9
QL01p041777 Quercus lobata HOM05D000051 ORTHO05D000015 1.1e-07 61.2 115 33.9
Cfa000227 Carpinus fangiana HOM05D000051 ORTHO05D000015 1.4e-07 60.8 117 31.6
QL05p074545 Quercus lobata HOM05D000051 ORTHO05D000015 1.4e-07 60.8 115 33.0
QL01p041814 Quercus lobata HOM05D000051 ORTHO05D000015 2.4e-07 60.1 115 33.0
Cfa000256 Carpinus fangiana HOM05D000051 ORTHO05D000015 3.2e-07 59.7 135 35.6
Lj1A869T76 Lonicera japonica HOM05D000051 ORTHO05D000015 3.2e-07 59.7 112 31.2
Medtr4g080773 Medicago truncatula HOM05D000051 ORTHO05D000015 3.2e-07 59.7 149 29.5
QL05p074592 Quercus lobata HOM05D000051 ORTHO05D000015 4.2e-07 59.3 127 37.0
Cfa006563 Carpinus fangiana HOM05D000051 ORTHO05D000015 5.5e-07 58.9 149 31.5
PSO832G1261 Papaver somniferum HOM05D000051 ORTHO05D000015 5.5e-07 58.9 135 31.9
Cfa000226 Carpinus fangiana HOM05D000051 ORTHO05D000015 7.1e-07 58.5 135 31.1
PSO210G4465 Papaver somniferum HOM05D000051 ORTHO05D000015 7.1e-07 58.5 132 27.3
Nitab4.5_0011608g0030 Nicotiana tabacum HOM05D000051 ORTHO05D000015 9.3e-07 58.2 74 41.9
QL01p041819 Quercus lobata HOM05D000051 ORTHO05D000015 9.3e-07 58.2 125 33.6
Dinv17822 Davidia involucrata HOM05D000051 ORTHO05D000015 1.2e-06 57.8 129 31.8
QL01p041888 Quercus lobata HOM05D000051 ORTHO05D000015 1.2e-06 57.8 120 30.8
Rhsim04G0000300 Rhododendron simsii HOM05D000051 ORTHO05D000015 1.6e-06 57.4 94 36.2
Sc13g0005440 Simmondsia chinensis HOM05D000051 ORTHO05D000015 4.6e-06 55.8 121 30.6
TWI53G1441 Tripterygium wilfordii HOM05D000051 ORTHO05D000015 4.6e-06 55.8 112 33.0


User provided reference genes

Program Settings