Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0005970 Simmondsia chinensis HOM05D007398 ORTHO05D004912 4.4e-62 241.1 121 100.0
Ah.04g165930 Amaranthus hybridus HOM05D007398 ORTHO05D004912 1.1e-12 77.0 110 44.5
AUR62015784 Chenopodium quinoa HOM05D007398 ORTHO05D004912 3.5e-11 72.0 105 47.6
AUR62020433 Chenopodium quinoa HOM05D007398 ORTHO05D004912 6.0e-11 71.2 105 45.7
Hma1.2p1_0328F.1_g126925 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 1.7e-10 69.7 131 40.5
Hma1.2p1_0328F.1_g126930 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 1.7e-10 69.7 131 40.5
CSS0017183 Camellia sinensis var. sinensis HOM05D007398 ORTHO05D004912 3.0e-10 68.9 132 40.9
Actinidia30523 Actinidia chinensis HOM05D007398 ORTHO05D004912 8.6e-10 67.4 125 41.6
Gohir.A04G144600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 1.9e-09 66.2 87 44.8
TAR626G0532 Trochodendron aralioides HOM05D007398 ORTHO05D004912 1.9e-09 66.2 128 42.2
Thecc.02G314700 Theobroma cacao HOM05D007398 ORTHO05D004912 3.3e-09 65.5 102 40.2
TWI75G1275 Tripterygium wilfordii HOM05D007398 ORTHO05D004912 3.3e-09 65.5 125 37.6
Ciclev10017196m.g Citrus clementina HOM05D007398 ORTHO05D004912 1.2e-08 63.5 120 41.7
Sp6g16920 Schrenkiella parvula HOM05D009587 ORTHO05D004912 1.2e-08 63.5 133 36.8
TAR627G0987 Trochodendron aralioides HOM05D007398 ORTHO05D004912 1.2e-08 63.5 122 40.2
Psat5g264000 Pisum sativum HOM05D007398 ORTHO05D004912 1.6e-08 63.2 112 40.2
Nn1g03511 Nelumbo nucifera HOM05D007398 ORTHO05D004912 2.8e-08 62.4 119 40.3
RcHm_v2.0_Chr2g0159281 Rosa chinensis HOM05D007398 ORTHO05D004912 3.6e-08 62.0 121 38.0
Sed0017131 Sechium edule HOM05D007398 ORTHO05D004912 6.2e-08 61.2 101 41.6
TAR629G1636 Trochodendron aralioides HOM05D007398 ORTHO05D004912 8.1e-08 60.8 125 40.8
ClCG02G008700 Citrullus lanatus HOM05D007398 ORTHO05D004912 1.1e-07 60.5 125 36.8
Duzib251G0280 Durio zibethinus HOM05D007398 ORTHO05D004912 1.1e-07 60.5 104 42.3
FAN02G4350 Fragaria x ananassa HOM05D007398 ORTHO05D004912 1.4e-07 60.1 121 36.4
Gohir.D04G189100 Gossypium hirsutum HOM05D007398 ORTHO05D004912 1.4e-07 60.1 87 42.5
TPR.G4189 Trifolium pratense HOM05D007398 ORTHO05D004912 1.4e-07 60.1 110 39.1
FAN10G4171 Fragaria x ananassa HOM05D007398 ORTHO05D004912 1.8e-07 59.7 121 36.4
Prupe.3G217200 Prunus persica HOM05D007398 ORTHO05D004912 1.8e-07 59.7 124 36.3
QL08p033081 Quercus lobata HOM05D007398 ORTHO05D004912 1.8e-07 59.7 123 38.2
COL.COLO4_27711 Corchorus olitorius HOM05D007398 ORTHO05D004912 2.3e-07 59.3 83 42.2
Dinv39711 Davidia involucrata HOM05D007398 ORTHO05D004912 2.3e-07 59.3 122 41.0
Thhalv10015018m.g Eutrema salsugineum HOM05D009587 ORTHO05D004912 2.3e-07 59.3 125 37.6
FAN05G1963 Fragaria x ananassa HOM05D007398 ORTHO05D004912 2.3e-07 59.3 121 36.4
FvH4_6g43180 Fragaria vesca HOM05D007398 ORTHO05D004912 3.1e-07 58.9 121 36.4
Actinidia03605 Actinidia chinensis HOM05D007398 ORTHO05D004912 4.0e-07 58.5 115 41.7
Ca_01601_v3 Cicer arietinum L. HOM05D007398 ORTHO05D004912 6.8e-07 57.8 103 41.7
FAN14G0586 Fragaria x ananassa HOM05D007398 ORTHO05D004912 6.8e-07 57.8 121 35.5
Gorai.012G184400 Gossypium raimondii HOM05D007398 ORTHO05D004912 6.8e-07 57.8 87 41.4
Atru.chr6.3184 Acer truncatum HOM05D007398 ORTHO05D004912 1.2e-06 57.0 121 38.0
FAN09G1954 Fragaria x ananassa HOM05D007398 ORTHO05D004912 1.2e-06 57.0 111 36.9
MD09G1108900 Malus domestica HOM05D007398 ORTHO05D004912 1.5e-06 56.6 124 35.5
THA.LOC104813425 Tarenaya hassleriana HOM05D009587 ORTHO05D004912 1.5e-06 56.6 118 38.1
VMungo1080G0246 Vigna mungo HOM05D007398 ORTHO05D004912 1.5e-06 56.6 95 43.2
Medtr2g088320 Medicago truncatula HOM05D007398 ORTHO05D004912 2.6e-06 55.8 114 36.0
Oeu041920.1 Olea europaea HOM05D007398 ORTHO05D004912 2.6e-06 55.8 104 36.5
Phvul.005G115200 Phaseolus vulgaris HOM05D007398 ORTHO05D004912 2.6e-06 55.8 98 41.8
Thecc.07G035100 Theobroma cacao HOM05D007398 ORTHO05D004912 2.6e-06 55.8 124 41.1
Glyma.13G308800 Glycine max HOM05D007398 ORTHO05D004912 3.4e-06 55.5 94 44.7
Atru.chr6.3183 Acer truncatum HOM05D007398 ORTHO05D004912 4.4e-06 55.1 121 38.0
CANSAT64G0797 Cannabis sativa HOM05D007398 ORTHO05D004912 4.4e-06 55.1 126 34.9
Cfa014400 Carpinus fangiana HOM05D007398 ORTHO05D004912 5.8e-06 54.7 122 32.8
CiPaw.03G160000 Carya illinoinensis HOM05D007398 ORTHO05D004912 5.8e-06 54.7 123 35.0
ClCG00G003290 Citrullus lanatus HOM05D007398 ORTHO05D004912 5.8e-06 54.7 98 38.8
ClCG02G001930 Citrullus lanatus HOM05D007398 ORTHO05D004912 5.8e-06 54.7 98 38.8
Lsat_1_v5_gn_7_92201 Lactuca sativa HOM05D007398 ORTHO05D004912 5.8e-06 54.7 114 37.7
CARHR234560 Cardamine hirsuta HOM05D009587 ORTHO05D004912 7.6e-06 54.3 118 33.9
Gorai.008G173500 Gossypium raimondii HOM05D007398 ORTHO05D004912 7.6e-06 54.3 88 42.0
QL07p015665 Quercus lobata HOM05D007398 ORTHO05D004912 7.6e-06 54.3 106 38.7
Glyma.12G193700 Glycine max HOM05D007398 ORTHO05D004912 9.9e-06 53.9 94 42.6


User provided reference genes

Program Settings