Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0005830 Simmondsia chinensis HOM05D007542 ORTHO05D009519 2.2e-89 332.4 187 100.0
Ciclev10009585m.g Citrus clementina HOM05D007542 ORTHO05D009519 7.8e-26 121.3 194 47.4
CSS0027066 Camellia sinensis var. sinensis HOM05D007542 ORTHO05D009519 1.7e-25 120.2 200 47.0
Sabra11G0071000 Salix brachista HOM05D007542 ORTHO05D009519 5.0e-25 118.6 197 45.7
TWI38G0725 Tripterygium wilfordii HOM05D007542 ORTHO05D009519 6.6e-25 118.2 197 47.2
COL.COLO4_09703 Corchorus olitorius HOM05D007542 ORTHO05D009519 8.6e-25 117.9 206 46.1
Thecc.07G031100 Theobroma cacao HOM05D007542 ORTHO05D009519 1.1e-24 117.5 200 45.5
Cpa.g.sc12.265 Carica papaya HOM05D007542 ORTHO05D009519 2.5e-24 116.3 199 43.7
Nitab4.5_0000328g0130 Nicotiana tabacum HOM05D007542 ORTHO05D009519 2.5e-24 116.3 192 42.2
Prupe.4G220300 Prunus persica HOM05D007542 ORTHO05D009519 2.5e-24 116.3 216 41.2
Potri.011G087000 Populus trichocarpa HOM05D007542 ORTHO05D009519 4.3e-24 115.5 204 43.6
Gorai.002G092100 Gossypium raimondii HOM05D007542 ORTHO05D009519 2.1e-23 113.2 198 43.4
Eucgr.F00716 Eucalyptus grandis HOM05D007542 ORTHO05D009519 6.2e-23 111.7 213 43.7
Cfa020302 Carpinus fangiana HOM05D007542 ORTHO05D009519 1.4e-22 110.5 197 43.7
GSVIVG01037700001 Vitis vinifera HOM05D007542 ORTHO05D009519 1.4e-22 110.5 206 43.7
Manes.03G133100 Manihot esculenta HOM05D007542 ORTHO05D009519 1.8e-22 110.2 210 41.9
TAR643G0006 Trochodendron aralioides HOM05D007542 ORTHO05D009519 4.0e-22 109.0 203 42.9
Duzib170G0581 Durio zibethinus HOM05D007542 ORTHO05D009519 8.9e-22 107.8 195 44.1
MELO3C014190.2 Cucumis melo HOM05D007542 ORTHO05D009519 1.5e-21 107.1 186 43.0
MSTRG.6947 Avicennia marina HOM05D007542 ORTHO05D009519 2.6e-21 106.3 190 40.5
Gohir.D01G069700 Gossypium hirsutum HOM05D007542 ORTHO05D009519 4.4e-21 105.5 196 43.4
RcHm_v2.0_Chr5g0040991 Rosa chinensis HOM05D007542 ORTHO05D009519 4.4e-21 105.5 214 40.7
TAR626G0917 Trochodendron aralioides HOM05D007542 ORTHO05D009519 4.4e-21 105.5 184 44.6
CsaV3_3G004930 Cucumis sativus L. HOM05D007542 ORTHO05D009519 7.5e-21 104.8 188 43.1
Hma1.2p1_1332F.1_g276050 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 9.8e-21 104.4 199 42.2
FAN25G0364 Fragaria x ananassa HOM05D007542 ORTHO05D009519 2.2e-20 103.2 210 38.6
FAN25G1685 Fragaria x ananassa HOM05D007542 ORTHO05D009519 2.2e-20 103.2 210 38.6
Nn1g03444 Nelumbo nucifera HOM05D007542 ORTHO05D009519 2.2e-20 103.2 213 39.0
QL08p006891 Quercus lobata HOM05D007542 ORTHO05D009519 2.9e-20 102.8 205 43.9
Prupe.4G220200 Prunus persica HOM05D007542 ORTHO05D009519 4.9e-20 102.1 209 40.2
Lj6g0015208 Lotus japonicus HOM05D007542 ORTHO05D009519 6.4e-20 101.7 177 39.5
Rhsim06G0222000 Rhododendron simsii HOM05D007542 ORTHO05D009519 8.3e-20 101.3 185 40.5
Ca_06340_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 1.1e-19 100.9 182 41.2
Sc03g0008420 Simmondsia chinensis HOM05D007542 ORTHO05D009519 1.9e-19 100.1 178 39.3
MD03G1195800 Malus domestica HOM05D007542 ORTHO05D009519 4.1e-19 99.0 203 40.4
FAN16G3720 Fragaria x ananassa HOM05D007542 ORTHO05D009519 7.1e-19 98.2 221 37.6
FAN21G0453 Fragaria x ananassa HOM05D007542 ORTHO05D009519 7.1e-19 98.2 221 37.6
DCAR_016720 Daucus carota HOM05D007542 ORTHO05D009519 9.2e-19 97.8 203 39.9
CiPaw.11G192900 Carya illinoinensis HOM05D007542 ORTHO05D009519 1.6e-18 97.1 209 45.5
FvH4_3g23270 Fragaria vesca HOM05D007542 ORTHO05D009519 2.1e-18 96.7 221 37.1
Dinv40786 Davidia involucrata HOM05D007542 ORTHO05D009519 2.7e-18 96.3 187 41.2
Cc05_g14120 Coffea canephora HOM05D007542 ORTHO05D009519 4.6e-18 95.5 207 41.5
LjContig00272g0021523 Lotus japonicus HOM05D007542 ORTHO05D009519 4.6e-18 95.5 183 40.4
Nitab4.5_0002826g0080 Nicotiana tabacum HOM05D007542 ORTHO05D009519 1.7e-17 93.6 194 42.3
Aqoxy1G03049 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 2.3e-17 93.2 207 36.2
Lalb_Chr04g0248281 Lupinus albus HOM05D007542 ORTHO05D009519 2.3e-17 93.2 186 40.9
Nn1g07236 Nelumbo nucifera HOM05D007542 ORTHO05D009519 3.0e-17 92.8 210 41.0
arahy.Tifrunner.gnm1.ann1.T42YYR Arachis hypogaea HOM05D007542 ORTHO05D009519 5.1e-17 92.0 174 37.4
arahy.Tifrunner.gnm1.ann1.C8UBJW Arachis hypogaea HOM05D007542 ORTHO05D009519 6.6e-17 91.7 174 37.4
MD11G1212200 Malus domestica HOM05D007542 ORTHO05D009519 6.6e-17 91.7 216 39.4
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 8.6e-17 91.3 200 38.5
CAN.G492.20 Capsicum annuum HOM05D007542 ORTHO05D009519 1.5e-16 90.5 218 41.3
Migut.H01805 Erythranthe guttata HOM05D007542 ORTHO05D009519 1.5e-16 90.5 186 39.8
Medtr5g093430 Medicago truncatula HOM05D007542 ORTHO05D009519 1.9e-16 90.1 194 37.6
Oeu026398.1 Olea europaea HOM05D007542 ORTHO05D009519 2.5e-16 89.7 196 35.2
PGSC0003DMG400014384 Solanum tuberosum HOM05D007542 ORTHO05D009519 2.5e-16 89.7 223 37.2
FAN11G1962 Fragaria x ananassa HOM05D007542 ORTHO05D009519 5.6e-16 88.6 210 36.7
Actinidia05075 Actinidia chinensis HOM05D007542 ORTHO05D009519 7.3e-16 88.2 174 44.3
TPR.G17892 Trifolium pratense HOM05D007542 ORTHO05D009519 7.3e-16 88.2 190 37.9
Medtr5g093440 Medicago truncatula HOM05D007542 ORTHO05D009519 1.6e-15 87.0 191 39.3
arahy.Tifrunner.gnm1.ann1.ENS6UV Arachis hypogaea HOM05D007542 ORTHO05D009519 2.1e-15 86.7 183 42.6
Glyma.18G092800 Glycine max HOM05D007542 ORTHO05D009519 2.1e-15 86.7 177 35.6
Atru.chr2.3499 Acer truncatum HOM05D007542 ORTHO05D009519 3.6e-15 85.9 222 35.6
Psat2g012360 Pisum sativum HOM05D007542 ORTHO05D009519 1.8e-14 83.6 192 36.5
Sopen07g033030 Solanum pennellii HOM05D007542 ORTHO05D009519 1.8e-14 83.6 182 39.6
TAR624G0015 Trochodendron aralioides HOM05D007542 ORTHO05D009519 2.3e-14 83.2 187 44.4
Phvul.006G046800 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 3.1e-14 82.8 184 37.5
Phvul.008G269700 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 4.0e-14 82.4 193 39.4
Glyma.08G319700 Glycine max HOM05D007542 ORTHO05D009519 1.2e-13 80.9 185 36.2
Glyma.14G021700 Glycine max HOM05D007542 ORTHO05D009519 1.2e-13 80.9 181 39.8
TPR.G1179 Trifolium pratense HOM05D007542 ORTHO05D009519 1.5e-13 80.5 194 35.1
Psat2g012400 Pisum sativum HOM05D007542 ORTHO05D009519 2.0e-13 80.1 189 38.1
Ca_25812_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 2.6e-13 79.7 177 34.5
Oeu008012.1 Olea europaea HOM05D007542 ORTHO05D009519 2.6e-13 79.7 174 36.8
VMungo0540G1120 Vigna mungo HOM05D007542 ORTHO05D009519 4.4e-13 79.0 180 41.1
MBI10_g09179_MAGBIO Magnolia biondii HOM05D007542 ORTHO05D009519 9.9e-13 77.8 180 36.1
Solyc10g006150.3 Solanum lycopersicum HOM05D007542 ORTHO05D009519 1.7e-12 77.0 223 35.0
MSTRG.12988 Avicennia marina HOM05D007542 ORTHO05D009519 2.2e-12 76.6 178 37.6
EL10Ac4g07752 Beta vulgaris HOM05D007542 ORTHO05D009519 1.9e-11 73.6 208 33.2
CAN.G337.69 Capsicum annuum HOM05D007542 ORTHO05D009519 1.2e-10 70.9 182 35.2
VMungo0647G1207 Vigna mungo HOM05D007542 ORTHO05D009519 1.2e-10 70.9 191 34.6
PSO541G2394 Papaver somniferum HOM05D007542 ORTHO05D009519 1.6e-10 70.5 240 32.1
Gohir.A01G083201 Gossypium hirsutum HOM05D007542 ORTHO05D009519 2.1e-10 70.1 94 42.6
PGSC0003DMG400022335 Solanum tuberosum HOM05D007542 ORTHO05D009519 1.0e-09 67.8 165 37.6
Lj6g0001233 Lotus japonicus HOM05D007542 ORTHO05D009519 5.1e-09 65.5 241 31.5
Medtr3g053160 Medicago truncatula HOM05D007542 ORTHO05D009519 6.6e-09 65.1 180 33.3
Nitab4.5_0004829g0120 Nicotiana tabacum HOM05D007542 ORTHO05D009519 4.3e-08 62.4 164 37.8
Peaxi162Scf00235g00059 Petunia axillaris HOM05D007542 ORTHO05D009519 1.6e-07 60.5 190 33.7
Lj1P878T38 Lonicera japonica HOM05D007542 ORTHO05D009519 1.4e-06 57.4 83 51.8
Sopen10g002100 Solanum pennellii HOM05D007542 ORTHO05D009519 4.0e-06 55.8 128 36.7
CDE08G0529 Ceratophyllum demersum HOM05D007542 ORTHO05D009519 6.8e-06 55.1 141 34.0


User provided reference genes

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