Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0005200 Simmondsia chinensis HOM05D005068 ORTHO05D019833 1.7e-62 242.7 135 100.0
Sc16g0005210 Simmondsia chinensis HOM05D005068 ORTHO05D019833 9.9e-39 163.7 138 71.0
Sc16g0005110 Simmondsia chinensis HOM05D060119 ORTHO05D019833 1.0e-19 100.5 108 61.1
Haze_16103 Corylus avellana HOM05D005068 ORTHO05D007561 1.8e-16 89.7 142 46.5
Cfa003490 Carpinus fangiana HOM05D005068 ORTHO05D007561 2.6e-15 85.9 142 45.1
ECA234G0903 Erigeron canadensis HOM05D005068 ORTHO05D007561 2.6e-15 85.9 114 49.1
CSS0009347 Camellia sinensis var. sinensis HOM05D005068 ORTHO05D007561 4.9e-14 81.6 140 42.1
CSS0048439 Camellia sinensis var. sinensis HOM05D005068 ORTHO05D007561 4.9e-14 81.6 140 42.1
Cpa.g.sc25.173 Carica papaya HOM05D005068 ORTHO05D007561 3.0e-11 72.4 138 40.6
ClCG09G001250 Citrullus lanatus HOM05D005068 ORTHO05D007561 3.9e-11 72.0 122 40.2
Lsat_1_v5_gn_5_136720 Lactuca sativa HOM05D005068 ORTHO05D007561 3.9e-11 72.0 113 45.1
Hund18654 Selenicereus undatus HOM05D005068 ORTHO05D007561 1.1e-10 70.5 147 39.5
CsaV3_7G034120 Cucumis sativus L. HOM05D005068 ORTHO05D007561 1.5e-10 70.1 126 39.7
CiPaw.01G213900 Carya illinoinensis HOM05D005068 ORTHO05D007561 3.3e-10 68.9 131 42.7
Manes.09G018800 Manihot esculenta HOM05D005068 ORTHO05D007561 3.3e-10 68.9 138 41.3
Peaxi162Scf00038g02247 Petunia axillaris HOM05D005068 ORTHO05D007561 4.3e-10 68.6 124 42.7
RcHm_v2.0_Chr2g0147011 Rosa chinensis HOM05D005068 ORTHO05D007561 7.4e-10 67.8 130 42.3
TAR628G1511 Trochodendron aralioides HOM05D005068 ORTHO05D007561 7.4e-10 67.8 132 40.2
TAR383G0209 Trochodendron aralioides HOM05D005068 ORTHO05D007561 9.6e-10 67.4 127 43.3
PSO384G5027 Papaver somniferum HOM05D005068 ORTHO05D007561 1.3e-09 67.0 137 38.7
Sed0017975 Sechium edule HOM05D005068 ORTHO05D007561 1.3e-09 67.0 127 37.8
Sc16g0005180 Simmondsia chinensis HOM05D060119 ORTHO05D388802 1.6e-09 66.6 86 53.5
TWI59G1220 Tripterygium wilfordii HOM05D005068 ORTHO05D007561 2.1e-09 66.2 130 42.3
Peaxi162Scf00535g00325 Petunia axillaris HOM05D005068 ORTHO05D007561 2.8e-09 65.9 124 41.1
PGR102G2847 Punica granatum HOM05D005068 ORTHO05D007561 2.8e-09 65.9 127 37.0
Aqoxy1G00349 Aquilegia oxysepala HOM05D005068 ORTHO05D007561 4.8e-09 65.1 121 41.3
Rhsim08G0242500 Rhododendron simsii HOM05D005068 ORTHO05D007561 6.2e-09 64.7 133 40.6
GSVIVG01016696001 Vitis vinifera HOM05D005068 ORTHO05D007561 8.2e-09 64.3 132 42.4
Oeu000383.1 Olea europaea HOM05D005068 ORTHO05D007561 1.4e-08 63.5 130 38.5
Potri.001G164100 Populus trichocarpa HOM05D005068 ORTHO05D007561 2.4e-08 62.8 122 41.8
PGSC0003DMG400009145 Solanum tuberosum HOM05D005068 ORTHO05D007561 2.4e-08 62.8 112 38.4
Lj5C31T11 Lonicera japonica HOM05D005068 ORTHO05D019833 5.3e-08 61.6 149 38.3
MELO3C024322.2 Cucumis melo HOM05D005068 ORTHO05D007561 9.0e-08 60.8 118 37.3
Solyc03g123530.4 Solanum lycopersicum HOM05D005068 ORTHO05D007561 1.2e-07 60.5 115 37.4
CAN.G790.67 Capsicum annuum HOM05D005068 ORTHO05D007561 1.5e-07 60.1 125 39.2
Phvul.010G125200 Phaseolus vulgaris HOM05D005068 ORTHO05D007561 1.5e-07 60.1 143 35.7
Thecc.06G127400 Theobroma cacao HOM05D005068 ORTHO05D007561 1.5e-07 60.1 81 50.6
VMungo0331G1431 Vigna mungo HOM05D005068 ORTHO05D007561 2.0e-07 59.7 139 35.3
MD17G1151100 Malus domestica HOM05D005068 ORTHO05D007561 2.6e-07 59.3 159 34.6
MSTRG.22527 Avicennia marina HOM05D005068 ORTHO05D007561 5.8e-07 58.2 118 43.2
EL10Ac7g16459 Beta vulgaris HOM05D005068 ORTHO05D007561 7.6e-07 57.8 147 34.7
Glyma.07G043700 Glycine max HOM05D005068 ORTHO05D007561 1.3e-06 57.0 150 32.7
Nn8g38536 Nelumbo nucifera HOM05D005068 ORTHO05D007561 1.3e-06 57.0 132 36.4
Gohir.A10G051500 Gossypium hirsutum HOM05D005068 ORTHO05D007561 1.7e-06 56.6 77 48.1
HPP92_014041 Vanilla planifolia HOM05D005068 ORTHO05D007561 2.2e-06 56.2 140 37.1
DCAR_026429 Daucus carota HOM05D005068 ORTHO05D007561 6.5e-06 54.7 121 36.4
MD09G1175700 Malus domestica HOM05D005068 ORTHO05D007561 6.5e-06 54.7 174 31.0
Ca_23422_v3 Cicer arietinum L. HOM05D005068 ORTHO05D007561 8.4e-06 54.3 134 39.6


User provided reference genes

Program Settings