Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0005110 Simmondsia chinensis HOM05D060119 ORTHO05D019833 7.0e-65 250.8 154 100.0
Sc16g0005210 Simmondsia chinensis HOM05D005068 ORTHO05D019833 1.9e-30 136.3 95 83.2
Sc16g0005180 Simmondsia chinensis HOM05D060119 ORTHO05D388802 1.5e-19 100.1 83 74.7
Sc16g0005200 Simmondsia chinensis HOM05D005068 ORTHO05D019833 1.5e-19 100.1 108 61.1
Cfa003490 Carpinus fangiana HOM05D005068 ORTHO05D007561 2.4e-12 76.3 110 53.6
Haze_16103 Corylus avellana HOM05D005068 ORTHO05D007561 5.3e-12 75.1 107 55.1
Hund18654 Selenicereus undatus HOM05D005068 ORTHO05D007561 1.2e-11 73.9 87 55.2
Phvul.010G125200 Phaseolus vulgaris HOM05D005068 ORTHO05D007561 4.9e-10 68.6 116 44.0
VMungo0331G1431 Vigna mungo HOM05D005068 ORTHO05D007561 1.1e-09 67.4 120 43.3
CSS0009347 Camellia sinensis var. sinensis HOM05D005068 ORTHO05D007561 2.4e-09 66.2 108 44.4
CSS0048439 Camellia sinensis var. sinensis HOM05D005068 ORTHO05D007561 2.4e-09 66.2 108 44.4
Glyma.07G043700 Glycine max HOM05D005068 ORTHO05D007561 2.4e-09 66.2 60 56.7
Manes.09G018800 Manihot esculenta HOM05D005068 ORTHO05D007561 4.2e-09 65.5 114 44.7
ECA234G0903 Erigeron canadensis HOM05D005068 ORTHO05D007561 7.1e-09 64.7 106 46.2
Psat2g016360 Pisum sativum HOM05D005068 ORTHO05D007561 9.3e-09 64.3 85 47.1
PGR102G2847 Punica granatum HOM05D005068 ORTHO05D007561 1.2e-08 63.9 117 41.9
Ca_23422_v3 Cicer arietinum L. HOM05D005068 ORTHO05D007561 1.6e-08 63.5 58 62.1
CiPaw.01G213900 Carya illinoinensis HOM05D005068 ORTHO05D007561 3.5e-08 62.4 111 46.8
TWI59G1220 Tripterygium wilfordii HOM05D005068 ORTHO05D007561 6.0e-08 61.6 77 54.5
TAR628G1511 Trochodendron aralioides HOM05D005068 ORTHO05D007561 2.3e-07 59.7 105 43.8
FAN09G4827 Fragaria x ananassa HOM05D005068 ORTHO05D007561 3.0e-07 59.3 90 56.7
HanXRQChr12g0360151 Helianthus annuus HOM05D005068 ORTHO05D007561 3.0e-07 59.3 81 55.6
Medtr4g119670 Medicago truncatula HOM05D005068 ORTHO05D007561 3.9e-07 58.9 85 47.1
FAN14G5424 Fragaria x ananassa HOM05D005068 ORTHO05D007561 6.7e-07 58.2 90 56.7
TAR383G0209 Trochodendron aralioides HOM05D005068 ORTHO05D007561 6.7e-07 58.2 103 45.6
FvH4_6g35460 Fragaria vesca HOM05D005068 ORTHO05D007561 1.1e-06 57.4 67 52.2
RcHm_v2.0_Chr2g0147011 Rosa chinensis HOM05D005068 ORTHO05D007561 2.5e-06 56.2 109 42.2
vmacro15070 Vaccinium macrocarpon HOM05D005068 ORTHO05D019833 2.5e-06 56.2 68 54.4
Lsat_1_v5_gn_5_136720 Lactuca sativa HOM05D005068 ORTHO05D007561 4.3e-06 55.5 96 46.9
CsaV3_7G034120 Cucumis sativus L. HOM05D005068 ORTHO05D007561 7.4e-06 54.7 91 47.3
Rhsim08G0242500 Rhododendron simsii HOM05D005068 ORTHO05D007561 7.4e-06 54.7 92 46.7
Sed0017975 Sechium edule HOM05D005068 ORTHO05D007561 9.6e-06 54.3 105 41.0


User provided reference genes

Program Settings