Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0005020 Simmondsia chinensis HOM05D000091 ORTHO05D018275 2.6e-33 144.8 74 100.0
Actinidia28863 Actinidia chinensis HOM05D000091 ORTHO05D009480 6.7e-13 77.0 72 52.8
TAR381G0295 Trochodendron aralioides HOM05D000091 ORTHO05D009480 1.8e-10 68.9 53 58.5
CiPaw.03G142000 Carya illinoinensis HOM05D000091 ORTHO05D009480 2.4e-10 68.6 74 52.7
Actinidia28232 Actinidia chinensis HOM05D000091 ORTHO05D009480 1.2e-09 66.2 58 55.2
Lsat_1_v5_gn_5_48701 Lactuca sativa HOM05D000091 ORTHO05D009480 1.2e-09 66.2 79 48.1
Dinv13190 Davidia involucrata HOM05D000091 ORTHO05D018275 1.5e-09 65.9 55 54.5
SalBow3G1883 Salvia bowleyana HOM05D000091 ORTHO05D009480 2.0e-09 65.5 69 49.3
Sc20g0005860 Simmondsia chinensis HOM05D000091 ORTHO05D018275 2.6e-09 65.1 32 90.6
Migut.H02359 Erythranthe guttata HOM05D000091 ORTHO05D009480 7.6e-09 63.5 74 48.6
Cfa002660 Carpinus fangiana HOM05D000091 ORTHO05D009480 1.0e-08 63.2 74 50.0
Dinv21907 Davidia involucrata HOM05D000091 ORTHO05D009480 1.3e-08 62.8 55 52.7
Haze_24930 Corylus avellana HOM05D000091 ORTHO05D009480 1.7e-08 62.4 74 50.0
Lj4C891G12 Lonicera japonica HOM05D000091 ORTHO05D018275 1.7e-08 62.4 53 56.6
Potri.007G093000 Populus trichocarpa HOM05D000091 ORTHO05D009480 2.2e-08 62.0 59 49.2
Rhsim08G0010600 Rhododendron simsii HOM05D000091 ORTHO05D009480 2.9e-08 61.6 59 55.9
PSO541G3276 Papaver somniferum HOM05D000091 ORTHO05D009480 4.9e-08 60.8 78 47.4
PSO781G0217 Papaver somniferum HOM05D000091 ORTHO05D009480 4.9e-08 60.8 78 43.6
Duzib264G1100 Durio zibethinus HOM05D000091 ORTHO05D009480 1.1e-07 59.7 59 49.2
Nn2g14514 Nelumbo nucifera HOM05D000091 ORTHO05D018275 1.4e-07 59.3 59 49.2
Cfa002661 Carpinus fangiana HOM05D000091 ORTHO05D009480 2.5e-07 58.5 72 47.2
CSS0047599 Camellia sinensis var. sinensis HOM05D000091 ORTHO05D009480 3.2e-07 58.2 61 50.8
Ah.02g122520 Amaranthus hybridus HOM05D000091 ORTHO05D018275 5.5e-07 57.4 70 42.9
Aqoxy6G00795 Aquilegia oxysepala HOM05D000091 ORTHO05D009480 1.6e-06 55.8 72 45.8
Prupe.6G187200 Prunus persica HOM05D000091 ORTHO05D009480 2.1e-06 55.5 58 50.0
MSTRG.23343 Avicennia marina HOM05D000091 ORTHO05D009480 2.7e-06 55.1 60 48.3


User provided reference genes

Program Settings