Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0004780 Simmondsia chinensis HOM05D000963 ORTHO05D010201 4.2e-101 371.3 180 100.0
arahy.Tifrunner.gnm1.ann1.AH21CB Arachis hypogaea HOM05D000963 ORTHO05D010658 3.1e-32 142.5 152 54.6
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.7e-26 121.7 153 47.7
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 9.8e-26 120.9 143 49.7
Lsat_1_v5_gn_5_181901 Lactuca sativa HOM05D000963 ORTHO05D004715 2.0e-23 113.2 79 75.9
Oeu053980.2 Olea europaea HOM05D000963 ORTHO05D010201 2.0e-23 113.2 79 74.7
BraSC25t45902Z Brassica rapa HOM05D000963 ORTHO05D010201 2.7e-23 112.8 67 86.6
BraSC138t45526Z Brassica rapa HOM05D000963 ORTHO05D010201 3.5e-23 112.5 79 75.9
Atru.chr11.485 Acer truncatum HOM05D000003 ORTHO05D010201 5.9e-23 111.7 79 74.7
Lsat_1_v5_gn_0_29380 Lactuca sativa HOM05D000963 ORTHO05D010201 7.8e-23 111.3 79 74.7
Lsat_1_v5_gn_5_4701 Lactuca sativa HOM05D000963 ORTHO05D004715 1.0e-22 110.9 79 74.7
PGSC0003DMG400039021 Solanum tuberosum HOM05D000963 ORTHO05D010201 1.3e-22 110.5 79 74.7
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 2.9e-22 109.4 79 74.7
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 2.9e-22 109.4 79 74.7
QL05p067011 Quercus lobata HOM05D000074 ORTHO05D001262 5.0e-22 108.6 79 73.4
Lsat_1_v5_gn_6_94280 Lactuca sativa HOM05D000963 ORTHO05D010201 1.9e-21 106.7 79 72.2
Nitab4.5_0002363g0010 Nicotiana tabacum HOM05D000963 ORTHO05D010201 3.3e-21 105.9 100 61.0
unitig_87.g27918 Utricularia gibba HOM05D000963 ORTHO05D010201 7.3e-21 104.8 79 72.2
unitig_87.g28034 Utricularia gibba HOM05D000963 ORTHO05D010201 7.3e-21 104.8 79 72.2
unitig_91.g26521 Utricularia gibba HOM05D000963 ORTHO05D010201 7.3e-21 104.8 79 72.2
Sed0024925 Sechium edule HOM05D000963 ORTHO05D010201 1.6e-20 103.6 64 84.4
arahy.Tifrunner.gnm1.ann1.6MMU9N Arachis hypogaea HOM05D000963 ORTHO05D010201 1.0e-19 100.9 73 75.3
arahy.Tifrunner.gnm1.ann1.A86CS8 Arachis hypogaea HOM05D000963 ORTHO05D010201 1.0e-19 100.9 73 75.3
arahy.Tifrunner.gnm1.ann1.JP0X74 Arachis hypogaea HOM05D000963 ORTHO05D010201 1.0e-19 100.9 73 75.3
Oeu015125.1 Olea europaea HOM05D000963 ORTHO05D010201 1.8e-19 100.1 78 67.9
Lsat_1_v5_gn_3_5060 Lactuca sativa HOM05D000963 ORTHO05D010201 3.0e-19 99.4 78 70.5
Lsat_1_v5_gn_2_20500 Lactuca sativa HOM05D000963 ORTHO05D010201 6.8e-19 98.2 63 76.2
SHI36393 Sapria himalayana HOM05D000963 ORTHO05D010201 6.8e-19 98.2 64 82.8
Migut.D01397 Erythranthe guttata HOM05D000963 ORTHO05D010201 7.5e-18 94.7 58 81.0
Gohir.D12G052550 Gossypium hirsutum HOM05D000963 ORTHO05D010201 1.3e-17 94.0 55 83.6
Lsat_1_v5_gn_2_98400 Lactuca sativa HOM05D000963 ORTHO05D010201 2.9e-17 92.8 55 83.6
Lsat_1_v5_gn_4_147701 Lactuca sativa HOM05D000963 ORTHO05D010201 2.9e-17 92.8 55 83.6
Lsat_1_v5_gn_4_147881 Lactuca sativa HOM05D000963 ORTHO05D010201 2.9e-17 92.8 55 83.6
Lsat_1_v5_gn_9_39260 Lactuca sativa HOM05D000963 ORTHO05D010201 2.9e-17 92.8 55 83.6
Gorai.008G055700 Gossypium raimondii HOM05D000963 ORTHO05D010201 8.3e-17 91.3 55 80.0
QL93p1338_0001 Quercus lobata HOM05D000963 ORTHO05D010201 1.4e-16 90.5 55 81.8
PGSC0003DMG402008784 Solanum tuberosum HOM05D000963 ORTHO05D010201 1.8e-16 90.1 55 81.8
CDE02G2524 Ceratophyllum demersum HOM05D000963 ORTHO05D010201 3.2e-16 89.4 55 81.8
DCAR_031888 Daucus carota HOM05D000963 ORTHO05D010201 3.2e-16 89.4 57 75.4
Nitab4.5_0006632g0010 Nicotiana tabacum HOM05D000963 ORTHO05D010201 1.6e-15 87.0 96 54.2
GSVIVG01004896001 Vitis vinifera HOM05D000963 ORTHO05D010201 4.6e-15 85.5 51 80.4
FAN28G1706 Fragaria x ananassa HOM05D000963 ORTHO05D010201 5.9e-15 85.1 55 76.4
Oeu015131.2 Olea europaea HOM05D000963 ORTHO05D004715 5.9e-15 85.1 123 44.7
unitig_91.g26528 Utricularia gibba HOM05D000963 ORTHO05D005131 1.0e-14 84.3 55 78.2
arahy.Tifrunner.gnm1.ann1.VA8KAZ Arachis hypogaea HOM05D000450 ORTHO05D000327 3.0e-14 82.8 45 77.8
Nitab4.5_0007400g0050 Nicotiana tabacum HOM05D000963 ORTHO05D010201 5.0e-14 82.0 95 53.7
BraSC143t45649Z Brassica rapa HOM05D000963 ORTHO05D010201 8.6e-14 81.3 68 67.6
VMungo0374G0001 Vigna mungo HOM05D000963 ORTHO05D011787 1.5e-13 80.5 49 73.5
Sc26g0002690 Simmondsia chinensis HOM05D000963 ORTHO05D010658 1.9e-13 80.1 129 42.6
Nitab4.5_0000085g0180 Nicotiana tabacum HOM05D000963 ORTHO05D010201 3.3e-13 79.3 55 72.7
Gorai.005G170600 Gossypium raimondii HOM05D000963 ORTHO05D010201 9.5e-13 77.8 55 72.7
arahy.Tifrunner.gnm1.ann1.370AP4 Arachis hypogaea HOM05D000963 ORTHO05D010658 1.2e-12 77.4 47 72.3
Migut.N02360 Erythranthe guttata HOM05D000963 ORTHO05D010201 4.7e-12 75.5 49 77.6
Sed0016068 Sechium edule HOM05D000963 ORTHO05D010201 2.3e-11 73.2 58 70.7
Sed0018152 Sechium edule HOM05D000963 ORTHO05D010201 2.3e-11 73.2 58 70.7
CSS0038985 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D010201 5.2e-11 72.0 42 81.0
Ca_23046_v3 Cicer arietinum L. HOM05D000963 ORTHO05D010658 8.9e-11 71.2 175 31.4
arahy.Tifrunner.gnm1.ann1.7470WV Arachis hypogaea HOM05D000963 ORTHO05D010658 2.0e-10 70.1 39 76.9
Medtr3g073060 Medicago truncatula HOM05D000963 ORTHO05D010658 3.4e-10 69.3 49 61.2
QL08p058464 Quercus lobata HOM05D000963 ORTHO05D010658 3.7e-09 65.9 36 77.8
arahy.Tifrunner.gnm1.ann1.DWP51K Arachis hypogaea HOM05D000963 ORTHO05D007321 1.1e-08 64.3 51 68.6
Psat1g063400 Pisum sativum HOM05D000963 ORTHO05D010201 1.4e-08 63.9 171 35.1
Nitab4.5_0000924g0010 Nicotiana tabacum HOM05D000963 ORTHO05D010201 4.1e-08 62.4 100 46.0
arahy.Tifrunner.gnm1.ann1.VLT00F Arachis hypogaea HOM05D001966 ORTHO05D011119 2.0e-07 60.1 29 82.8
Peaxi162Scf00269g01412 Petunia axillaris HOM05D002694 ORTHO05D002927 2.0e-07 60.1 169 36.1
Psat3g162200 Pisum sativum HOM05D000963 ORTHO05D004715 2.7e-07 59.7 48 58.3
arahy.Tifrunner.gnm1.ann1.3H2S78 Arachis hypogaea HOM05D000445 ORTHO05D000314 6.0e-07 58.5 32 75.0
TPR.G40232 Trifolium pratense HOM05D000011 ORTHO05D002639 1.0e-06 57.8 30 76.7
arahy.Tifrunner.gnm1.ann1.QQ6I31 Arachis hypogaea HOM05D000963 ORTHO05D010201 1.7e-06 57.0 46 65.2
Rhsim11G0059100 Rhododendron simsii HOM05D000963 ORTHO05D010201 2.3e-06 56.6 55 60.0
Lalb_Chr15g0081121 Lupinus albus HOM05D000963 ORTHO05D010658 8.6e-06 54.7 48 52.1


User provided reference genes

Program Settings