Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0003960 Simmondsia chinensis HOM05D006928 ORTHO05D008618 1.7e-45 185.7 96 100.0
Hund03424 Selenicereus undatus HOM05D006928 ORTHO05D008618 1.4e-34 149.4 88 87.5
Prupe.6G162900 Prunus persica HOM05D006928 ORTHO05D008618 1.8e-34 149.1 93 81.7
COL.COLO4_22417 Corchorus olitorius HOM05D006928 ORTHO05D008618 2.3e-34 148.7 92 83.7
Dinv09934 Davidia involucrata HOM05D006928 ORTHO05D008618 2.3e-34 148.7 93 82.8
EL10Ac6g15253 Beta vulgaris HOM05D006928 ORTHO05D008618 4.0e-34 147.9 92 84.8
RcHm_v2.0_Chr2g0119151 Rosa chinensis HOM05D006928 ORTHO05D008618 6.8e-34 147.1 93 81.7
CSS0007569 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 8.9e-34 146.7 92 81.5
CSS0018620 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 8.9e-34 146.7 92 81.5
ClCG02G000690 Citrullus lanatus HOM05D006928 ORTHO05D008618 1.2e-33 146.4 93 76.3
AUR62003624 Chenopodium quinoa HOM05D006928 ORTHO05D008618 2.0e-33 145.6 94 79.8
Sed0020530 Sechium edule HOM05D006928 ORTHO05D008618 2.0e-33 145.6 93 76.3
Cfa002868 Carpinus fangiana HOM05D006928 ORTHO05D008618 2.6e-33 145.2 89 84.3
Gohir.A02G138100 Gossypium hirsutum HOM05D006928 ORTHO05D008618 3.4e-33 144.8 89 84.3
Gohir.D03G048800 Gossypium hirsutum HOM05D006928 ORTHO05D008618 3.4e-33 144.8 89 84.3
Gorai.003G050100 Gossypium raimondii HOM05D006928 ORTHO05D008618 3.4e-33 144.8 89 84.3
PGR119G2472 Punica granatum HOM05D006928 ORTHO05D008618 3.4e-33 144.8 96 78.1
Actinidia17615 Actinidia chinensis HOM05D006928 ORTHO05D008618 4.4e-33 144.4 93 82.8
CsaV3_2G018080 Cucumis sativus L. HOM05D006928 ORTHO05D008618 5.8e-33 144.1 93 76.3
Eucgr.I00245 Eucalyptus grandis HOM05D006928 ORTHO05D008618 7.5e-33 143.7 92 79.3
Glyma.08G146400 Glycine max HOM05D006928 ORTHO05D008618 7.5e-33 143.7 93 76.3
Phvul.002G269100 Phaseolus vulgaris HOM05D006928 ORTHO05D008618 7.5e-33 143.7 93 77.4
THA.LOC104818466 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 7.5e-33 143.7 84 86.9
GSVIVG01026587001 Vitis vinifera HOM05D006928 ORTHO05D008618 7.5e-33 143.7 93 79.6
AL8G42110 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 9.8e-33 143.3 96 78.1
Sabra16G0195000 Salix brachista HOM05D006928 ORTHO05D008618 9.8e-33 143.3 93 79.6
Ciclev10026852m.g Citrus clementina HOM05D006928 ORTHO05D008618 1.3e-32 142.9 85 82.4
Duzib264G0933 Durio zibethinus HOM05D006928 ORTHO05D008618 1.3e-32 142.9 93 78.5
MD15G1343100 Malus domestica HOM05D006928 ORTHO05D008618 1.3e-32 142.9 85 83.5
Thecc.01G120800 Theobroma cacao HOM05D006928 ORTHO05D008618 1.7e-32 142.5 89 82.0
Aqoxy3G02632 Aquilegia oxysepala HOM05D006928 ORTHO05D008618 2.9e-32 141.7 93 79.6
FAN23G1796 Fragaria x ananassa HOM05D006928 ORTHO05D008618 3.7e-32 141.4 91 79.1
FAN28G2803 Fragaria x ananassa HOM05D006928 ORTHO05D008618 3.7e-32 141.4 91 79.1
Lj4g0006915 Lotus japonicus HOM05D006928 ORTHO05D008618 3.7e-32 141.4 93 74.2
Manes.12G150300 Manihot esculenta HOM05D006928 ORTHO05D008618 4.9e-32 141.0 93 78.5
Psat7g048720 Pisum sativum HOM05D006928 ORTHO05D008618 4.9e-32 141.0 93 74.2
Glyma.05G188300 Glycine max HOM05D006928 ORTHO05D008618 6.4e-32 140.6 93 75.3
Thhalv10005190m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 8.3e-32 140.2 87 80.5
FvH4_1g23590 Fragaria vesca HOM05D006928 ORTHO05D008618 8.3e-32 140.2 91 78.0
FAN19G2906 Fragaria x ananassa HOM05D006928 ORTHO05D008618 8.3e-32 140.2 91 78.0
Nn1g06098 Nelumbo nucifera HOM05D006928 ORTHO05D008618 1.4e-31 139.4 93 73.1
BraA09t36529Z Brassica rapa HOM05D006928 ORTHO05D008618 1.9e-31 139.0 87 80.5
Duzib187G1761 Durio zibethinus HOM05D006928 ORTHO05D008618 1.9e-31 139.0 92 78.3
TPR.G2179 Trifolium pratense HOM05D006928 ORTHO05D008618 1.9e-31 139.0 93 73.1
CiPaw.04G083900 Carya illinoinensis HOM05D006928 ORTHO05D008618 2.4e-31 138.7 94 77.7
Lalb_Chr12g0203321 Lupinus albus HOM05D006928 ORTHO05D008618 2.4e-31 138.7 87 79.3
Potri.001G309200 Populus trichocarpa HOM05D006928 ORTHO05D008618 3.2e-31 138.3 93 77.4
Sp6g33580 Schrenkiella parvula HOM05D006928 ORTHO05D008618 3.2e-31 138.3 93 75.3
Nitab4.5_0010284g0020 Nicotiana tabacum HOM05D006928 ORTHO05D008618 4.1e-31 137.9 96 78.1
THA.LOC104799431 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 4.1e-31 137.9 94 75.5
TAR381G0700 Trochodendron aralioides HOM05D006928 ORTHO05D008618 5.4e-31 137.5 85 80.0
CANSAT01G1375 Cannabis sativa HOM05D006928 ORTHO05D008618 7.0e-31 137.1 93 75.3
CARHR278670 Cardamine hirsuta HOM05D006928 ORTHO05D008618 9.2e-31 136.7 96 72.9
Cc00_g00790 Coffea canephora HOM05D006928 ORTHO05D008618 9.2e-31 136.7 93 74.2
Cc07_g17360 Coffea canephora HOM05D006928 ORTHO05D008618 9.2e-31 136.7 93 74.2
Aa31LG1G17250 Aethionema arabicum HOM05D006928 ORTHO05D008618 1.2e-30 136.3 90 76.7
BcaB04g19985 Brassica carinata HOM05D006928 ORTHO05D008618 1.2e-30 136.3 80 85.0
MBI09_g18622_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 1.6e-30 136.0 94 74.5
MBI09_g20115_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 1.6e-30 136.0 94 74.5
Peaxi162Scf00025g02217 Petunia axillaris HOM05D006928 ORTHO05D008618 1.6e-30 136.0 96 76.0
Sp2g27750 Schrenkiella parvula HOM05D006928 ORTHO05D008618 1.6e-30 136.0 87 77.0
AL6G20240 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 2.0e-30 135.6 85 81.2
BolC9t53907H Brassica oleracea HOM05D006928 ORTHO05D008618 2.7e-30 135.2 87 77.0
Thhalv10015138m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 3.5e-30 134.8 94 75.5
MSTRG.2691 Avicennia marina HOM05D006928 ORTHO05D008618 4.6e-30 134.4 91 76.9
Nitab4.5_0002064g0030 Nicotiana tabacum HOM05D006928 ORTHO05D008618 4.6e-30 134.4 96 76.0
Atru.chr4.541 Acer truncatum HOM05D006928 ORTHO05D008618 6.0e-30 134.0 89 76.4
AT5G09830 Arabidopsis thaliana HOM05D006928 ORTHO05D008618 6.0e-30 134.0 85 78.8
DCAR_027258 Daucus carota HOM05D006928 ORTHO05D008618 6.0e-30 134.0 93 73.1
Solyc11g005360.2 Solanum lycopersicum HOM05D006928 ORTHO05D008618 1.3e-29 132.9 89 76.4
Sopen11g001370 Solanum pennellii HOM05D006928 ORTHO05D008618 1.3e-29 132.9 89 76.4
Carub.0006s0825 Capsella rubella HOM05D006928 ORTHO05D008618 1.7e-29 132.5 88 79.5
Lsat_1_v5_gn_2_66720 Lactuca sativa HOM05D006928 ORTHO05D008618 2.3e-29 132.1 98 68.4
TWI75G0630 Tripterygium wilfordii HOM05D006928 ORTHO05D008618 2.3e-29 132.1 91 74.7
Carub.0008s2549 Capsella rubella HOM05D006928 ORTHO05D008618 3.0e-29 131.7 96 71.9
HanXRQChr15g0471661 Helianthus annuus HOM05D006928 ORTHO05D008618 5.0e-29 131.0 91 71.4
BcaB08g37169 Brassica carinata HOM05D006928 ORTHO05D008618 1.1e-28 129.8 91 72.5
C09p67690 Brassica napus HOM05D006928 ORTHO05D008618 1.1e-28 129.8 91 72.5
BolC9t59531H Brassica oleracea HOM05D006928 ORTHO05D008618 1.1e-28 129.8 91 72.5
PSO541G1601 Papaver somniferum HOM05D006928 ORTHO05D008618 1.1e-28 129.8 94 72.3
ECA238G4197 Erigeron canadensis HOM05D006928 ORTHO05D008618 1.5e-28 129.4 90 72.2
A10p27630 Brassica napus HOM05D006928 ORTHO05D008618 1.9e-28 129.0 87 74.7
BcaC04g23298 Brassica carinata HOM05D006928 ORTHO05D008618 2.5e-28 128.6 96 70.8
BraA10t44815Z Brassica rapa HOM05D006928 ORTHO05D008618 3.3e-28 128.3 91 71.4
PSO675G6866 Papaver somniferum HOM05D006928 ORTHO05D008618 5.6e-28 127.5 94 71.3
CDE12G0365 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 7.3e-28 127.1 82 76.8
HPP92_027450 Vanilla planifolia HOM05D006928 ORTHO05D008618 1.2e-27 126.3 85 72.9
Migut.H01113 Erythranthe guttata HOM05D006928 ORTHO05D008618 1.6e-27 125.9 95 67.4
AagrBONN_evm.TU.Sc2ySwM_344.3776 Anthoceros agrestis HOM05D006928 ORTHO05D008618 2.1e-27 125.6 88 71.6
AUR62017933 Chenopodium quinoa HOM05D006928 ORTHO05D008618 3.1e-26 121.7 73 84.9
SMO351G0462 Selaginella moellendorffii HOM05D006928 ORTHO05D008618 6.8e-26 120.6 82 72.0
Haze_25192 Corylus avellana HOM05D006928 ORTHO05D008618 4.4e-25 117.9 69 88.4
Pp3c4_15580 Physcomitrium patens HOM05D006928 ORTHO05D008618 4.4e-25 117.9 95 65.3
CDE04G1901 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 5.8e-25 117.5 87 71.3
Haze_25197 Corylus avellana HOM05D006928 ORTHO05D008618 7.5e-25 117.1 69 87.0
QL06p051863 Quercus lobata HOM05D006928 ORTHO05D008618 9.8e-25 116.7 73 83.6
Haze_25196 Corylus avellana HOM05D006928 ORTHO05D008618 1.3e-24 116.3 68 88.2
Mapoly0023s0156 Marchantia polymorpha HOM05D006928 ORTHO05D008618 2.2e-24 115.5 87 64.4
Actinidia26282 Actinidia chinensis HOM05D006928 ORTHO05D008618 2.9e-24 115.2 71 85.9
Ah.03g146570 Amaranthus hybridus HOM05D006928 ORTHO05D008618 3.7e-24 114.8 75 85.3
Zm00001eb146740 Zea mays HOM05D006928 ORTHO05D008618 1.1e-23 113.2 95 63.2
CARHR203570 Cardamine hirsuta HOM05D006928 ORTHO05D008618 1.4e-23 112.8 66 83.3
Rhsim08G0003500 Rhododendron simsii HOM05D002612 ORTHO05D008618 1.4e-23 112.8 72 81.9
C09p09990 Brassica napus HOM05D006928 ORTHO05D008618 4.1e-23 111.3 90 65.6
TAR376G0498 Trochodendron aralioides HOM05D006928 ORTHO05D008618 4.1e-23 111.3 77 76.6
SGA_v2.0_scaffold137G35109 Striga asiatica HOM05D006928 ORTHO05D008618 5.4e-23 110.9 75 76.0
Cpa.g.sc1003.1 Carica papaya HOM05D006928 ORTHO05D008618 1.6e-22 109.4 72 77.8
Medtr8g092690 Medicago truncatula HOM05D006928 ORTHO05D008618 2.7e-22 108.6 72 73.6
CAN.G249.11 Capsicum annuum HOM05D006928 ORTHO05D008618 5.1e-21 104.4 72 76.4
unitig_0.g37 Utricularia gibba HOM05D006928 ORTHO05D008618 8.6e-21 103.6 66 77.3
SalBow1G8150 Salvia bowleyana HOM05D006928 ORTHO05D008618 2.5e-20 102.1 71 73.2
CBR_g19927 Chara braunii HOM05D006928 ORTHO05D008618 4.7e-19 97.8 80 62.5
BcaB08g37178 Brassica carinata HOM05D006928 ORTHO05D008618 3.1e-18 95.1 91 57.1
Cre03.g164550 Chlamydomonas reinhardtii HOM05D006928 ORTHO05D008618 2.6e-17 92.0 79 58.2
Os01g0866600 Oryza sativa ssp. japonica HOM05D006928 ORTHO05D008618 5.8e-17 90.9 57 78.9
SEGI_33222 Sequoiadendron giganteum HOM05D006928 ORTHO05D008618 9.2e-15 83.6 108 49.1


User provided reference genes

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