Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0003890 Simmondsia chinensis HOM05D003899 ORTHO05D003655 5.3e-58 228.4 219 100.0
AUR62017911 Chenopodium quinoa HOM05D003899 ORTHO05D003655 8.0e-14 81.6 93 48.4
AUR62043709 Chenopodium quinoa HOM05D003899 ORTHO05D003655 8.0e-14 81.6 93 48.4
Dinv24330 Davidia involucrata HOM05D003899 ORTHO05D003655 2.8e-11 73.2 92 40.2
EL10Ac7g17632 Beta vulgaris HOM05D003899 ORTHO05D003655 1.4e-10 70.9 78 48.7
AUR62003600 Chenopodium quinoa HOM05D003899 ORTHO05D003655 1.4e-10 70.9 74 48.6
EL10Ac6g15278 Beta vulgaris HOM05D003899 ORTHO05D003655 1.8e-10 70.5 78 47.4
Haze_17704 Corylus avellana HOM05D003899 ORTHO05D003655 5.9e-09 65.5 93 43.0
Actinidia06640 Actinidia chinensis HOM05D003899 ORTHO05D003655 7.8e-09 65.1 88 39.8
COL.COLO4_08943 Corchorus olitorius HOM05D003899 ORTHO05D003655 3.8e-08 62.8 97 37.1
Rhsim10G0136200 Rhododendron simsii HOM05D003899 ORTHO05D003655 3.8e-08 62.8 99 40.4
RhsimUnG0132700 Rhododendron simsii HOM05D003899 ORTHO05D003655 3.8e-08 62.8 99 40.4
Atru.chr4.839 Acer truncatum HOM05D003899 ORTHO05D003655 6.6e-08 62.0 92 35.9
Sc02g0004420 Simmondsia chinensis HOM05D003899 ORTHO05D003655 1.9e-07 60.5 59 42.4
Ca_12820_v3 Cicer arietinum L. HOM05D003899 ORTHO05D003655 2.5e-07 60.1 96 36.5
COL.COLO4_14024 Corchorus olitorius HOM05D003899 ORTHO05D003655 2.5e-07 60.1 84 41.7
Manes.12G153900 Manihot esculenta HOM05D003899 ORTHO05D003655 3.3e-07 59.7 92 35.9
Lj2C604T4 Lonicera japonica HOM05D003899 ORTHO05D003655 4.3e-07 59.3 81 35.8
Cfa018365 Carpinus fangiana HOM05D003899 ORTHO05D003655 5.6e-07 58.9 93 36.6
FvH4_2g14670 Fragaria vesca HOM05D003899 ORTHO05D003655 9.5e-07 58.2 93 37.6
FAN24G0119 Fragaria x ananassa HOM05D003899 ORTHO05D003655 9.5e-07 58.2 93 37.6
FAN20G0153 Fragaria x ananassa HOM05D003899 ORTHO05D003655 1.2e-06 57.8 72 41.7
Ciclev10003780m.g Citrus clementina HOM05D003899 ORTHO05D003655 1.6e-06 57.4 94 33.0
Lj2C604T3 Lonicera japonica HOM05D003899 ORTHO05D003655 2.1e-06 57.0 82 36.6
DCAR_001362 Daucus carota HOM05D003899 ORTHO05D003655 3.6e-06 56.2 79 36.7
Dinv03732 Davidia involucrata HOM05D000043 ORTHO05D002577 3.6e-06 56.2 88 38.6
FAN15G3500 Fragaria x ananassa HOM05D003899 ORTHO05D003655 3.6e-06 56.2 93 37.6
Thecc.01G128000 Theobroma cacao HOM05D003899 ORTHO05D003655 4.7e-06 55.8 88 35.2
Gohir.A02G066500 Gossypium hirsutum HOM05D003899 ORTHO05D003655 6.1e-06 55.5 89 33.7


User provided reference genes

Program Settings