Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0003440 Simmondsia chinensis HOM05D006933 ORTHO05D009629 8.1e-263 909.8 447 100.0
Sc18g0002450 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.7e-116 421.8 505 46.9
Sc06g0004220 Simmondsia chinensis HOM05D006933 ORTHO05D009629 8.1e-114 414.8 307 68.1
Sc01g0005690 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.0e-92 344.7 241 73.0
Sc24g0000790 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.3e-90 337.8 273 63.7
Sc10g0006330 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.3e-84 317.0 205 76.1
Sc08g0005990 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.7e-84 315.5 402 48.8
Sc12g0005710 Simmondsia chinensis HOM05D006933 ORTHO05D009629 8.2e-82 308.5 313 50.2
Sc26g0001380 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.4e-81 307.0 441 43.5
Sc07g0006510 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.5e-80 302.8 306 54.2
Sc25g0003910 Simmondsia chinensis HOM05D006933 ORTHO05D009629 7.2e-78 295.4 313 53.7
Sc19g0006270 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.4e-76 291.2 416 45.4
Sc19g0006300 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.2e-74 283.9 331 48.9
Sc20g0003570 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.2e-69 268.1 245 57.1
Sc10g0006470 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.8e-66 256.1 182 67.6
Sc13g0006150 Simmondsia chinensis HOM05D006933 ORTHO05D009629 7.0e-65 252.3 171 69.0
Sc08g0005340 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.5e-63 245.7 180 66.7
Sc17g0002170 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.2e-62 243.4 148 77.7
Sc17g0003640 Simmondsia chinensis HOM05D006933 ORTHO05D009629 9.4e-62 241.9 311 45.0
Sc23g0004060 Simmondsia chinensis HOM05D006933 ORTHO05D009629 9.4e-62 241.9 273 50.2
Sc12g0007420 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.8e-58 229.6 188 59.6
Sc26g0002220 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.0e-55 219.5 273 46.5
Sc03g0004560 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.1e-53 212.6 151 64.9
Sc12g0008540 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.6e-51 207.2 173 56.1
Sc18g0006260 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.8e-50 203.8 127 76.4
Sc23g0004170 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.3e-50 202.6 278 41.0
Sc11g0005090 Simmondsia chinensis HOM05D006933 ORTHO05D009629 8.3e-50 202.2 172 53.5
Sc02g0004050 Simmondsia chinensis HOM05D006933 ORTHO05D009629 7.3e-46 189.1 234 44.0
Sc13g0005400 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.2e-44 183.0 190 51.1
Sc21g0005420 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.8e-43 179.5 140 56.4
Sc20g0003680 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.7e-42 177.9 113 69.9
Sc11g0004570 Simmondsia chinensis HOM05D006933 ORTHO05D009629 8.3e-42 175.6 256 39.8
Sc10g0007390 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.4e-41 174.1 136 59.6
Sc26g0002540 Simmondsia chinensis HOM05D006933 ORTHO05D009629 9.2e-41 172.2 111 72.1
Sc06g0004260 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.3e-39 167.5 341 37.5
Sc06g0004410 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.0e-39 167.2 171 48.0
Sc20g0004170 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.5e-38 164.9 170 50.0
Sc04g0003720 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.3e-38 163.7 219 40.6
Sc09g0006400 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.7e-34 151.4 248 40.7
Sc03g0007280 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.5e-30 137.5 120 57.5
Sc23g0004070 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.3e-30 137.1 82 79.3
Sc01g0006920 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.3e-30 136.7 186 41.9
Sc09g0005800 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.2e-27 128.6 81 72.8
Sc10g0006460 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.4e-25 120.9 100 61.0
Sc07g0005650 Simmondsia chinensis HOM05D013278 ORTHO05D009629 7.1e-25 119.4 75 68.0
Sc16g0005360 Simmondsia chinensis HOM05D006933 ORTHO05D009629 7.1e-25 119.4 230 36.5
Sc23g0003820 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.5e-24 117.1 100 60.0
Sc05g0005650 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.7e-23 114.8 89 64.0
Sc16g0006020 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.7e-23 114.8 263 32.7
Sc18g0005120 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.7e-23 114.8 245 33.9
Sc20g0003530 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.0e-23 114.0 96 55.2
Sc26g0003190 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.3e-22 110.2 105 52.4
Sc09g0006390 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.4e-20 105.1 90 61.1
Sc03g0008970 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.6e-19 100.9 106 53.8
Sc04g0003750 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.8e-19 99.8 69 68.1
Sc11g0005100 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.4e-17 95.1 80 62.5
Sc20g0002870 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.9e-17 94.7 80 55.0
Sc23g0004620 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.2e-17 94.0 76 61.8
Lj3g0019996 Lotus japonicus HOM05D008220 ORTHO05D010358 4.2e-17 93.6 331 26.6
Actinidia12169 Actinidia chinensis HOM05D012898 ORTHO05D009356 9.3e-17 92.4 291 24.1
Sc06g0006000 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.2e-16 92.0 80 52.5
Sc13g0006290 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.0e-16 89.7 59 61.0
Lj1g0024049 Lotus japonicus HOM05D008220 ORTHO05D010358 3.9e-15 87.0 319 23.8
Lj5g0003699 Lotus japonicus HOM05D008220 ORTHO05D010358 1.9e-14 84.7 282 22.0
Sc04g0003670 Simmondsia chinensis HOM05D006933 ORTHO05D009629 7.3e-14 82.8 57 63.2
vmacro21928 Vaccinium macrocarpon HOM05D000086 ORTHO05D000431 7.3e-14 82.8 252 23.8
Sc02g0003510 Simmondsia chinensis HOM05D009348 ORTHO05D010856 2.1e-13 81.3 266 23.7
Ah.13g066110 Amaranthus hybridus HOM05D008762 ORTHO05D011252 4.8e-13 80.1 320 23.8
Sc01g0002780 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.2e-13 79.7 73 52.1
Ah.01g013230 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.1e-12 79.0 317 23.0
LjContig00357g0008125 Lotus japonicus HOM05D008220 ORTHO05D010358 1.4e-12 78.6 282 22.7
Sc22g0001820 Simmondsia chinensis HOM05D009348 ORTHO05D010856 5.3e-12 76.6 234 25.2
Sc09g0007560 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.0e-11 74.7 59 59.3
Sc04g0006070 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.6e-11 74.3 81 48.1
Sc14g0002620 Simmondsia chinensis HOM05D009209 ORTHO05D011705 9.9e-11 72.4 215 24.2
Sc12g0005980 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.7e-10 71.6 54 63.0
Sc16g0002560 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.4e-10 69.7 80 48.8
Sc24g0001410 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.4e-10 69.7 62 58.1
Sc02g0006620 Simmondsia chinensis HOM05D006933 ORTHO05D009629 8.4e-10 69.3 60 51.7
Lj6g0019563 Lotus japonicus HOM05D008220 ORTHO05D010358 1.1e-09 68.9 261 24.5
COL.COLO4_32924 Corchorus olitorius HOM05D011882 ORTHO05D015081 2.4e-09 67.8 230 24.8
Lj2g0017871 Lotus japonicus HOM05D008220 ORTHO05D010358 2.4e-09 67.8 269 21.6
vmacro12106 Vaccinium macrocarpon HOM05D000081 ORTHO05D009356 2.4e-09 67.8 262 24.4
Sc03g0002790 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.4e-09 66.6 140 33.6
Lj1g0018935 Lotus japonicus HOM05D008220 ORTHO05D010358 7.1e-09 66.2 285 21.1
LjContig00583g0009142 Lotus japonicus HOM05D008220 ORTHO05D010358 9.3e-09 65.9 284 21.1
Sc11g0005990 Simmondsia chinensis HOM05D006933 ORTHO05D009629 9.3e-09 65.9 103 40.8
Sc14g0003540 Simmondsia chinensis HOM05D009209 ORTHO05D011057 3.5e-08 63.9 99 35.4
COL.COLO4_25415 Corchorus olitorius HOM05D009258 ORTHO05D009583 4.6e-08 63.5 209 22.5
Lj1g0011765 Lotus japonicus HOM05D008220 ORTHO05D010358 6.0e-08 63.2 301 19.9
Sc11g0003370 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.3e-07 62.0 113 38.1
Sc22g0003620 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.3e-07 62.0 48 62.5
Ah.07g196620 Amaranthus hybridus HOM05D008762 ORTHO05D031041 1.7e-07 61.6 75 34.7
Gohir.A10G205900 Gossypium hirsutum HOM05D000003 ORTHO05D000006 1.7e-07 61.6 313 20.8
vmacro12740 Vaccinium macrocarpon HOM05D000625 ORTHO05D000467 1.7e-07 61.6 73 37.0
Sc03g0004450 Simmondsia chinensis HOM05D009209 ORTHO05D011705 2.3e-07 61.2 176 23.3
Sc19g0004560 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.3e-07 61.2 56 55.4
Duzib170G0053 Durio zibethinus HOM05D037386 ORTHO05D035091 3.0e-07 60.8 188 25.0
Ah.16g108500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.9e-07 60.5 71 42.3
CSS0024781 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 3.9e-07 60.5 224 25.0
Phvul.010G051400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 6.6e-07 59.7 218 24.3
Sc17g0002240 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.6e-07 59.7 63 41.3
DCAR_027640 Daucus carota HOM05D004122 ORTHO05D004468 8.7e-07 59.3 243 23.9
DCAR_027728 Daucus carota HOM05D004122 ORTHO05D004468 8.7e-07 59.3 243 23.9
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 8.7e-07 59.3 75 32.0
RhsimUnG0101100 Rhododendron simsii HOM05D008219 ORTHO05D009356 8.7e-07 59.3 75 36.0
DCAR_027726 Daucus carota HOM05D004122 ORTHO05D004468 1.1e-06 58.9 243 23.9
Lj5g0005201 Lotus japonicus HOM05D008220 ORTHO05D010358 1.1e-06 58.9 310 21.6
Rhsim02G0133000 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.1e-06 58.9 71 38.0
Actinidia24024 Actinidia chinensis HOM05D023450 ORTHO05D023249 1.5e-06 58.5 66 37.9
Ah.10g026690 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.5e-06 58.5 133 27.8
Sc03g0007270 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.5e-06 58.5 41 63.4
Sc01g0004870 Simmondsia chinensis HOM05D009209 ORTHO05D009629 1.9e-06 58.2 63 39.7
Actinidia11796 Actinidia chinensis HOM05D002604 ORTHO05D009356 2.5e-06 57.8 72 36.1
COL.COLO4_27331 Corchorus olitorius HOM05D009258 ORTHO05D009583 2.5e-06 57.8 223 22.0
Ah.07g201540 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.3e-06 57.4 76 35.5
Sc24g0004290 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.3e-06 57.4 87 44.8
Actinidia23250 Actinidia chinensis HOM05D012898 ORTHO05D009356 4.3e-06 57.0 91 33.0
DCAR_004018 Daucus carota HOM05D004122 ORTHO05D004468 4.3e-06 57.0 126 28.6
Ah.08g219520 Amaranthus hybridus HOM05D008762 ORTHO05D011252 5.6e-06 56.6 92 29.3
Rhsim11G0150800 Rhododendron simsii HOM05D012808 ORTHO05D009356 5.6e-06 56.6 103 26.2
Ah.10g026880 Amaranthus hybridus HOM05D008762 ORTHO05D011252 7.3e-06 56.2 70 37.1
Phvul.009G005600 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 9.6e-06 55.8 295 19.7
Rhsim02G0045800 Rhododendron simsii HOM05D008219 ORTHO05D009356 9.6e-06 55.8 71 36.6
Sc12g0009480 Simmondsia chinensis HOM05D006933 ORTHO05D009629 9.6e-06 55.8 93 34.4
Sc21g0005050 Simmondsia chinensis HOM05D006933 ORTHO05D009629 9.6e-06 55.8 98 41.8


User provided reference genes

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