Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0002930 Simmondsia chinensis HOM05D000231 ORTHO05D000132 9.0e-54 213.4 112 100.0
Duzib264G0750 Durio zibethinus HOM05D000231 ORTHO05D000132 1.5e-16 89.7 118 40.7
Cfa004122 Carpinus fangiana HOM05D000231 ORTHO05D000132 1.8e-14 82.8 115 38.3
Manes.12G113400 Manihot esculenta HOM05D000231 ORTHO05D000132 3.1e-14 82.0 117 38.5
Duzib147G0891 Durio zibethinus HOM05D000231 ORTHO05D000132 4.1e-14 81.6 118 39.8
Potri.007G055300 Populus trichocarpa HOM05D000231 ORTHO05D000132 7.0e-14 80.9 117 40.2
Hma1.2p1_0808F.1_g221540 Hydrangea macrophylla HOM05D000231 ORTHO05D000132 2.0e-13 79.3 114 39.5
TWI73G0443 Tripterygium wilfordii HOM05D000231 ORTHO05D000132 2.0e-13 79.3 115 41.7
GSVIVG01000125001 Vitis vinifera HOM05D000231 ORTHO05D000132 2.0e-13 79.3 117 38.5
CiPaw.01G005500 Carya illinoinensis HOM05D000231 ORTHO05D000132 5.9e-13 77.8 109 38.5
Gorai.007G222800 Gossypium raimondii HOM05D000231 ORTHO05D000132 1.7e-12 76.3 112 39.3
TWI53G0627 Tripterygium wilfordii HOM05D000231 ORTHO05D000132 2.9e-12 75.5 115 41.7
Gorai.003G029800 Gossypium raimondii HOM05D000231 ORTHO05D000132 3.8e-12 75.1 120 40.0
Gohir.D11G207800 Gossypium hirsutum HOM05D000231 ORTHO05D000132 6.5e-12 74.3 112 38.4
Gohir.A11G215600 Gossypium hirsutum HOM05D000231 ORTHO05D000132 8.5e-12 73.9 112 38.4
Atru.chr13.823 Acer truncatum HOM05D000231 ORTHO05D000132 1.5e-11 73.2 113 38.9
Ciclev10026015m.g Citrus clementina HOM05D000231 ORTHO05D000132 1.9e-11 72.8 114 40.4
Dinv04058 Davidia involucrata HOM05D000231 ORTHO05D000132 1.9e-11 72.8 103 38.8
Sabra07G0047600 Salix brachista HOM05D000231 ORTHO05D000132 2.5e-11 72.4 115 37.4
vmacro05402 Vaccinium macrocarpon HOM05D000231 ORTHO05D000132 2.5e-11 72.4 111 36.9
QL06p039678 Quercus lobata HOM05D000231 ORTHO05D000132 4.2e-11 71.6 97 40.2
Thecc.01G071700 Theobroma cacao HOM05D000231 ORTHO05D000132 5.5e-11 71.2 104 36.5
Gohir.A12G076400 Gossypium hirsutum HOM05D000231 ORTHO05D000132 9.4e-11 70.5 107 41.1
TAR628G1445 Trochodendron aralioides HOM05D000231 ORTHO05D000132 9.4e-11 70.5 110 37.3
Oeu054191.1 Olea europaea HOM05D000231 ORTHO05D000132 4.7e-10 68.2 116 37.1
MD15G1295800 Malus domestica HOM05D000231 ORTHO05D000132 6.1e-10 67.8 109 42.2
Gohir.D12G074700 Gossypium hirsutum HOM05D000231 ORTHO05D000132 8.0e-10 67.4 107 39.3
Gorai.008G082800 Gossypium raimondii HOM05D000231 ORTHO05D000132 8.0e-10 67.4 107 39.3
Gohir.A02G152100 Gossypium hirsutum HOM05D000231 ORTHO05D000132 1.4e-09 66.6 110 38.2
Rhsim10G0100800 Rhododendron simsii HOM05D000231 ORTHO05D000132 1.4e-09 66.6 105 36.2
TAR625G1196 Trochodendron aralioides HOM05D000231 ORTHO05D000132 1.4e-09 66.6 110 35.5
THA.LOC104819878 Tarenaya hassleriana HOM05D000231 ORTHO05D000132 1.8e-09 66.2 111 35.1
Aqoxy5G00878 Aquilegia oxysepala HOM05D000231 ORTHO05D000132 2.3e-09 65.9 107 39.3
CiPaw.08G050000 Carya illinoinensis HOM05D000231 ORTHO05D000132 2.3e-09 65.9 107 35.5
FAN19G0292 Fragaria x ananassa HOM05D000231 ORTHO05D000132 3.0e-09 65.5 105 40.0
RcHm_v2.0_Chr2g0107771 Rosa chinensis HOM05D000231 ORTHO05D000132 3.0e-09 65.5 102 37.3
Eucgr.H02304 Eucalyptus grandis HOM05D000231 ORTHO05D000132 4.0e-09 65.1 109 36.7
FvH4_1g17530 Fragaria vesca HOM05D000231 ORTHO05D000132 4.0e-09 65.1 105 40.0
FAN28G2458 Fragaria x ananassa HOM05D000231 ORTHO05D000132 4.0e-09 65.1 105 40.0
TAR381G0078 Trochodendron aralioides HOM05D000231 ORTHO05D000132 4.0e-09 65.1 110 32.7
COL.COLO4_28514 Corchorus olitorius HOM05D000231 ORTHO05D000132 6.8e-09 64.3 113 31.9
arahy.Tifrunner.gnm1.ann1.EPPW6A Arachis hypogaea HOM05D000231 ORTHO05D000132 8.8e-09 63.9 112 28.6
QL12p037951 Quercus lobata HOM05D000231 ORTHO05D000132 8.8e-09 63.9 120 31.7
Atru.chr3.178 Acer truncatum HOM05D000231 ORTHO05D000132 1.2e-08 63.5 113 37.2
Haze_22447 Corylus avellana HOM05D000231 ORTHO05D000132 1.2e-08 63.5 110 32.7
Rhsim10G0100500 Rhododendron simsii HOM05D000231 ORTHO05D000132 1.2e-08 63.5 104 35.6
CANSAT01G3196 Cannabis sativa HOM05D000231 ORTHO05D000132 1.5e-08 63.2 109 34.9
Cc07_g07010 Coffea canephora HOM05D000231 ORTHO05D000132 2.0e-08 62.8 106 33.0
Duzib093G2066 Durio zibethinus HOM05D000231 ORTHO05D000132 2.6e-08 62.4 111 32.4
TAR376G0828 Trochodendron aralioides HOM05D000231 ORTHO05D000132 2.6e-08 62.4 110 35.5
arahy.Tifrunner.gnm1.ann1.J88HVL Arachis hypogaea HOM05D000231 ORTHO05D000132 3.4e-08 62.0 112 27.7
Glyma.11G048500 Glycine max HOM05D000231 ORTHO05D000132 4.4e-08 61.6 101 31.7
Atru.chr3.149 Acer truncatum HOM05D000231 ORTHO05D000132 5.7e-08 61.2 113 36.3
CSS0034023 Camellia sinensis var. sinensis HOM05D000231 ORTHO05D000132 5.7e-08 61.2 113 33.6
DCAR_025795 Daucus carota HOM05D000231 ORTHO05D000132 5.7e-08 61.2 96 34.4
MD02G1184500 Malus domestica HOM05D000231 ORTHO05D000132 7.5e-08 60.8 113 40.7
Nn1g04579 Nelumbo nucifera HOM05D000231 ORTHO05D000132 7.5e-08 60.8 72 41.7
Oeu003561.1 Olea europaea HOM05D000231 ORTHO05D000132 7.5e-08 60.8 109 33.9
Prupe.6G222000 Prunus persica HOM05D000231 ORTHO05D000132 7.5e-08 60.8 113 38.9
PSO017G0141 Papaver somniferum HOM05D000231 ORTHO05D000132 1.3e-07 60.1 76 44.7
ClCG01G017510 Citrullus lanatus HOM05D000231 ORTHO05D000132 1.7e-07 59.7 116 33.6
CsaV3_6G044060 Cucumis sativus L. HOM05D000231 ORTHO05D000132 2.2e-07 59.3 116 33.6
SalBow5G1424 Salvia bowleyana HOM05D000231 ORTHO05D000132 2.2e-07 59.3 102 40.2
SalBow5G1487 Salvia bowleyana HOM05D000231 ORTHO05D000132 2.2e-07 59.3 102 40.2
Actinidia11987 Actinidia chinensis HOM05D000231 ORTHO05D000132 2.8e-07 58.9 94 39.4
Lj2g0003418 Lotus japonicus HOM05D000231 ORTHO05D000132 2.8e-07 58.9 103 27.2
Manes.18G045900 Manihot esculenta HOM05D000231 ORTHO05D000132 2.8e-07 58.9 112 34.8
Rhsim06G0061900 Rhododendron simsii HOM05D000231 ORTHO05D000132 3.7e-07 58.5 106 34.9
ECA238G4659 Erigeron canadensis HOM05D000231 ORTHO05D000132 4.8e-07 58.2 105 38.1
SGA_v2.0_scaffold13G06416 Striga asiatica HOM05D000231 ORTHO05D000132 6.3e-07 57.8 105 37.1
CiPaw.07G175600 Carya illinoinensis HOM05D000231 ORTHO05D000132 1.1e-06 57.0 110 30.0
PSO170G4213 Papaver somniferum HOM05D000231 ORTHO05D000132 1.1e-06 57.0 112 33.9
Actinidia36436 Actinidia chinensis HOM05D000231 ORTHO05D000132 1.8e-06 56.2 72 38.9
Glyma.01G193400 Glycine max HOM05D000231 ORTHO05D000132 2.4e-06 55.8 101 28.7
Lalb_Chr05g0213671 Lupinus albus HOM05D000231 ORTHO05D000132 2.4e-06 55.8 104 30.8
PGR102G1886 Punica granatum HOM05D000231 ORTHO05D000132 3.1e-06 55.5 112 35.7
FAN23G2868 Fragaria x ananassa HOM05D000231 ORTHO05D000132 4.1e-06 55.1 72 40.3
Gorai.009G219400 Gossypium raimondii HOM05D000231 ORTHO05D000132 4.1e-06 55.1 102 34.3
GSVIVG01009353001 Vitis vinifera HOM05D000231 ORTHO05D000132 4.1e-06 55.1 105 33.3
Migut.H00355 Erythranthe guttata HOM05D000231 ORTHO05D000132 5.4e-06 54.7 71 38.0
Glyma.06G046200 Glycine max HOM05D000231 ORTHO05D000132 5.4e-06 54.7 112 31.2
Gohir.D05G212900 Gossypium hirsutum HOM05D000231 ORTHO05D000132 5.4e-06 54.7 102 35.3
Cfa004124 Carpinus fangiana HOM05D000231 ORTHO05D000132 7.0e-06 54.3 68 39.7
HanXRQChr16g0513141 Helianthus annuus HOM05D000231 ORTHO05D000132 7.0e-06 54.3 112 33.9
Thecc.08G089700 Theobroma cacao HOM05D000231 ORTHO05D000132 7.0e-06 54.3 109 31.2


User provided reference genes

Program Settings