Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0002660 Simmondsia chinensis HOM05D004708 ORTHO05D005573 3.8e-91 338.2 176 100.0
Hund16439 Selenicereus undatus HOM05D004708 ORTHO05D005573 3.4e-71 271.9 165 80.0
Peaxi162Scf00008g03516 Petunia axillaris HOM05D004708 ORTHO05D005573 2.4e-69 265.8 169 77.5
Solyc02g062640.4 Solanum lycopersicum HOM05D004708 ORTHO05D005573 3.1e-69 265.4 169 79.3
Sopen02g013670 Solanum pennellii HOM05D004708 ORTHO05D005573 7.0e-69 264.2 169 78.7
Actinidia19193 Actinidia chinensis HOM05D004708 ORTHO05D005573 9.1e-69 263.8 173 76.3
Ciclev10026600m.g Citrus clementina HOM05D004708 ORTHO05D005573 2.7e-68 262.3 173 76.9
Nitab4.5_0000136g0310 Nicotiana tabacum HOM05D004708 ORTHO05D005573 7.7e-68 260.8 169 76.9
Atru.chr3.607 Acer truncatum HOM05D004708 ORTHO05D005573 1.3e-67 260.0 168 76.2
COL.COLO4_34048 Corchorus olitorius HOM05D004708 ORTHO05D005573 1.3e-67 260.0 173 75.1
Dinv13509 Davidia involucrata HOM05D004708 ORTHO05D005573 1.3e-67 260.0 176 73.3
AUR62004070 Chenopodium quinoa HOM05D004708 ORTHO05D005573 2.9e-67 258.8 172 76.7
PGSC0003DMG400015508 Solanum tuberosum HOM05D004708 ORTHO05D005573 3.8e-67 258.5 164 78.0
Aa31LG8G15760 Aethionema arabicum HOM05D004708 ORTHO05D005573 5.0e-67 258.1 163 76.7
Gorai.008G067200 Gossypium raimondii HOM05D004708 ORTHO05D005573 6.5e-67 257.7 162 77.2
Thecc.03G010200 Theobroma cacao HOM05D004708 ORTHO05D005573 6.5e-67 257.7 173 74.6
Carub.0003s3243 Capsella rubella HOM05D004708 ORTHO05D005573 8.6e-67 257.3 167 74.3
Manes.01G136850 Manihot esculenta HOM05D004708 ORTHO05D005573 1.5e-66 256.5 161 77.6
AL3G51520 Arabidopsis lyrata HOM05D004708 ORTHO05D005573 1.9e-66 256.1 167 74.3
vmacro17822 Vaccinium macrocarpon HOM05D004708 ORTHO05D005573 2.5e-66 255.8 176 72.7
CSS0040556 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 3.2e-66 255.4 176 72.2
Cc07_g09720 Coffea canephora HOM05D004708 ORTHO05D005573 3.2e-66 255.4 158 78.5
TWI53G1618 Tripterygium wilfordii HOM05D004708 ORTHO05D005573 3.2e-66 255.4 167 76.0
CAN.G111.48 Capsicum annuum HOM05D004708 ORTHO05D005573 4.2e-66 255.0 166 77.7
Cpa.g.sc6.137 Carica papaya HOM05D004708 ORTHO05D005573 5.5e-66 254.6 173 74.0
AT2G18250 Arabidopsis thaliana HOM05D004708 ORTHO05D005573 7.2e-66 254.2 167 73.1
MSTRG.23511 Avicennia marina HOM05D004708 ORTHO05D005573 7.2e-66 254.2 174 71.8
QL06p046600 Quercus lobata HOM05D004708 ORTHO05D005573 7.2e-66 254.2 160 78.8
Thhalv10022875m.g Eutrema salsugineum HOM05D004708 ORTHO05D005573 9.5e-66 253.8 167 73.7
HanXRQChr09g0261341 Helianthus annuus HOM05D004708 ORTHO05D005573 9.5e-66 253.8 178 72.5
Lsat_1_v5_gn_4_148240 Lactuca sativa HOM05D004708 ORTHO05D005573 9.5e-66 253.8 160 77.5
Rhsim08G0118600 Rhododendron simsii HOM05D004708 ORTHO05D005573 9.5e-66 253.8 173 74.0
ECA232G2192 Erigeron canadensis HOM05D004708 ORTHO05D005573 1.2e-65 253.4 175 75.4
Gohir.A09G170800 Gossypium hirsutum HOM05D004708 ORTHO05D005573 1.2e-65 253.4 168 74.4
EL10Ac6g15543 Beta vulgaris HOM05D004708 ORTHO05D005573 4.7e-65 251.5 165 78.2
AUR62007583 Chenopodium quinoa HOM05D004708 ORTHO05D005573 4.7e-65 251.5 160 79.4
BcaC06g36391 Brassica carinata HOM05D004708 ORTHO05D005573 8.0e-65 250.8 162 75.3
A07p02450 Brassica napus HOM05D004708 ORTHO05D005573 8.0e-65 250.8 156 77.6
BraA07t28041Z Brassica rapa HOM05D004708 ORTHO05D005573 8.0e-65 250.8 156 77.6
CARHR108820 Cardamine hirsuta HOM05D004708 ORTHO05D005573 8.0e-65 250.8 167 72.5
Gorai.006G188300 Gossypium raimondii HOM05D004708 ORTHO05D005573 8.0e-65 250.8 168 73.8
MD15G1258400 Malus domestica HOM05D004708 ORTHO05D005573 1.0e-64 250.4 176 71.6
PGR119G0658 Punica granatum HOM05D004708 ORTHO05D005573 1.0e-64 250.4 177 74.0
BcaB03g16615 Brassica carinata HOM05D004708 ORTHO05D005573 1.4e-64 250.0 162 75.9
Prupe.7G156900 Prunus persica HOM05D004708 ORTHO05D005573 1.4e-64 250.0 173 72.8
Duzib084G0089 Durio zibethinus HOM05D004708 ORTHO05D005573 1.8e-64 249.6 173 72.3
Hund13990 Selenicereus undatus HOM05D004708 ORTHO05D005573 2.3e-64 249.2 172 72.1
Hma1.2p1_0224F.1_g094553 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 3.0e-64 248.8 171 71.9
GSVIVG01018936001 Vitis vinifera HOM05D004708 ORTHO05D005573 3.0e-64 248.8 157 77.1
MD02G1144700 Malus domestica HOM05D004708 ORTHO05D005573 4.0e-64 248.4 173 72.3
Manes.02G095600 Manihot esculenta HOM05D004708 ORTHO05D005573 4.0e-64 248.4 161 75.8
Sp3g31670 Schrenkiella parvula HOM05D004708 ORTHO05D005573 6.8e-64 247.7 167 71.9
Thecc.01G032800 Theobroma cacao HOM05D004708 ORTHO05D005573 6.8e-64 247.7 169 71.6
BolC7t40861H Brassica oleracea HOM05D004708 ORTHO05D005573 8.8e-64 247.3 162 74.7
CiPaw.01G043700 Carya illinoinensis HOM05D004708 ORTHO05D005573 8.8e-64 247.3 168 72.6
CSS0030971 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 1.2e-63 246.9 173 71.1
BcaC04g22917 Brassica carinata HOM05D004708 ORTHO05D005573 1.5e-63 246.5 161 73.3
C07p04600 Brassica napus HOM05D004708 ORTHO05D005573 2.0e-63 246.1 162 74.1
COL.COLO4_22050 Corchorus olitorius HOM05D004708 ORTHO05D005573 2.0e-63 246.1 168 74.4
DCAR_023857 Daucus carota HOM05D004708 ORTHO05D005573 2.6e-63 245.7 158 75.3
BolC9t54282H Brassica oleracea HOM05D004708 ORTHO05D005573 3.4e-63 245.4 161 72.7
Potri.005G121200 Populus trichocarpa HOM05D004708 ORTHO05D005573 3.4e-63 245.4 174 73.0
BcaB07g31677 Brassica carinata HOM05D004708 ORTHO05D005573 5.7e-63 244.6 167 71.3
GSVIVG01025946001 Vitis vinifera HOM05D004708 ORTHO05D005573 7.5e-63 244.2 170 70.6
Duzib264G1087 Durio zibethinus HOM05D004708 ORTHO05D005573 9.8e-63 243.8 177 68.9
CAN.G1645.15 Capsicum annuum HOM05D004708 ORTHO05D005573 1.3e-62 243.4 164 75.6
FvH4_1g13011 Fragaria vesca HOM05D004708 ORTHO05D005573 2.2e-62 242.7 163 73.6
Aqoxy5G01592 Aquilegia oxysepala HOM05D004708 ORTHO05D005573 3.7e-62 241.9 169 72.2
unitig_21.g20250 Utricularia gibba HOM05D004708 ORTHO05D005573 3.7e-62 241.9 168 71.4
DCAR_032374 Daucus carota HOM05D004708 ORTHO05D005573 4.9e-62 241.5 156 75.0
SalBow6G2211 Salvia bowleyana HOM05D004708 ORTHO05D005573 4.9e-62 241.5 161 73.3
Migut.H00962 Erythranthe guttata HOM05D004708 ORTHO05D005573 8.3e-62 240.7 171 71.3
CsaV3_3G014460 Cucumis sativus L. HOM05D004708 ORTHO05D005573 1.1e-61 240.4 166 72.9
ClCG05G006010 Citrullus lanatus HOM05D000319 ORTHO05D000903 1.8e-61 239.6 165 71.5
RcHm_v2.0_Chr2g0101171 Rosa chinensis HOM05D004708 ORTHO05D005573 1.8e-61 239.6 164 73.2
THA.LOC104807464 Tarenaya hassleriana HOM05D004708 ORTHO05D005573 1.8e-61 239.6 199 62.8
Hma1.2p1_0789F.1_g218250 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 5.4e-61 238.0 178 66.9
SGA_v2.0_scaffold258G45779 Striga asiatica HOM05D004708 ORTHO05D005573 7.0e-61 237.7 168 70.8
Psat2g158360 Pisum sativum HOM05D004708 ORTHO05D005573 1.2e-60 236.9 161 73.3
Medtr5g020680 Medicago truncatula HOM05D004708 ORTHO05D005573 2.0e-60 236.1 161 73.3
Ca_24863_v3 Cicer arietinum L. HOM05D004708 ORTHO05D005573 4.5e-60 235.0 160 73.1
Medtr8g073890 Medicago truncatula HOM05D004708 ORTHO05D005573 5.9e-60 234.6 168 70.2
Aqoxy3G01739 Aquilegia oxysepala HOM05D004708 ORTHO05D005573 7.8e-60 234.2 159 73.0
arahy.Tifrunner.gnm1.ann1.CZ32YF Arachis hypogaea HOM05D004708 ORTHO05D005573 7.8e-60 234.2 161 72.7
arahy.Tifrunner.gnm1.ann1.Y7U3HW Arachis hypogaea HOM05D004708 ORTHO05D005573 1.0e-59 233.8 161 72.0
arahy.Tifrunner.gnm1.ann1.V6C6W3 Arachis hypogaea HOM05D004708 ORTHO05D005573 1.3e-59 233.4 161 72.7
Lj2g0001027 Lotus japonicus HOM05D002605 ORTHO05D002842 1.7e-59 233.0 160 72.5
Zm00001eb231510 Zea mays HOM05D004708 ORTHO05D005573 2.3e-59 232.6 172 67.4
MELO3C006648.2 Cucumis melo HOM05D004708 ORTHO05D005573 2.9e-59 232.3 165 70.3
MD15G1258500 Malus domestica HOM05D004708 ORTHO05D005573 2.9e-59 232.3 161 72.0
Os07g0179400 Oryza sativa ssp. japonica HOM05D004708 ORTHO05D005573 2.9e-59 232.3 159 73.0
PSO764G0091 Papaver somniferum HOM05D004708 ORTHO05D005573 5.0e-59 231.5 156 74.4
TPR.G2405 Trifolium pratense HOM05D004708 ORTHO05D005573 5.0e-59 231.5 161 71.4
Glyma.01G173050 Glycine max HOM05D004708 ORTHO05D005573 1.5e-58 229.9 161 70.2
Ca_21297_v3 Cicer arietinum L. HOM05D004708 ORTHO05D005573 1.9e-58 229.6 160 71.2
Lsat_1_v5_gn_2_77221 Lactuca sativa HOM05D004708 ORTHO05D005573 7.3e-58 227.6 158 72.2
VMungo1215G3002 Vigna mungo HOM05D004708 ORTHO05D005573 9.5e-58 227.3 161 68.3
Phvul.002G032200 Phaseolus vulgaris HOM05D004708 ORTHO05D005573 1.2e-57 226.9 162 67.9
TAR624G0473 Trochodendron aralioides HOM05D004708 ORTHO05D005573 1.6e-57 226.5 178 66.3
SEGI_37374 Sequoiadendron giganteum HOM05D004708 ORTHO05D005573 2.8e-57 225.7 159 69.8
Lalb_Chr05g0212721 Lupinus albus HOM05D004708 ORTHO05D005573 3.6e-57 225.3 157 71.3
ATR0796G251 Amborella trichopoda HOM05D004708 ORTHO05D005573 4.7e-57 224.9 159 69.8
ECA238G4849 Erigeron canadensis HOM05D004708 ORTHO05D005573 3.0e-56 222.2 158 70.3
arahy.Tifrunner.gnm1.ann1.KFYL3R Arachis hypogaea HOM05D004708 ORTHO05D005573 5.2e-56 221.5 161 70.8
PSO339G0290 Papaver somniferum HOM05D004708 ORTHO05D005573 6.8e-56 221.1 154 72.1
Gohir.A12G064100 Gossypium hirsutum HOM05D004708 ORTHO05D005573 5.7e-55 218.0 162 68.5
FAN19G0555 Fragaria x ananassa HOM05D004708 ORTHO05D005573 9.8e-55 217.2 197 60.9
Sabra05G0099900 Salix brachista HOM05D004708 ORTHO05D005573 1.3e-54 216.9 219 58.0
HPP92_014750 Vanilla planifolia HOM05D004708 ORTHO05D005573 2.2e-54 216.1 152 70.4
FAN25G0668 Fragaria x ananassa HOM05D004708 ORTHO05D005573 3.7e-54 215.3 163 65.0
CDE12G0116 Ceratophyllum demersum HOM05D004708 ORTHO05D005573 5.4e-53 211.5 157 66.2
Hma1.2p1_1820F.1_g304110 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 1.6e-52 209.9 138 74.6
Dinv39998 Davidia involucrata HOM05D004708 ORTHO05D005573 2.0e-52 209.5 177 63.8
FAN21G0333 Fragaria x ananassa HOM05D004708 ORTHO05D005573 1.0e-51 207.2 166 60.8
Gohir.D09G166500 Gossypium hirsutum HOM05D004708 ORTHO05D005573 2.3e-51 206.1 173 64.2
CDE01G0816 Ceratophyllum demersum HOM05D004708 ORTHO05D005573 3.0e-51 205.7 154 65.6
Glyma.02G276900 Glycine max HOM05D004708 ORTHO05D005573 3.3e-50 202.2 143 67.1
BcaC04g22919 Brassica carinata HOM05D004708 ORTHO05D005573 3.1e-48 195.7 189 56.1
SMO357G0013 Selaginella moellendorffii HOM05D004708 ORTHO05D005573 8.9e-48 194.1 149 67.1
Pp3c18_16890 Physcomitrium patens HOM05D004708 ORTHO05D005573 3.4e-47 192.2 152 63.8
SMO318G0001 Selaginella moellendorffii HOM05D004708 ORTHO05D005573 3.4e-47 192.2 165 62.4
A09p11790 Brassica napus HOM05D004708 ORTHO05D005573 8.3e-46 187.6 132 68.2
C09p13900 Brassica napus HOM05D004708 ORTHO05D005573 1.4e-45 186.8 163 59.5
CARHR108850 Cardamine hirsuta HOM05D004708 ORTHO05D005573 1.2e-44 183.7 119 73.1
FvH4_3g26020 Fragaria vesca HOM05D004708 ORTHO05D005573 2.3e-43 179.5 134 62.7
Zm00001eb301320 Zea mays HOM05D004708 ORTHO05D005573 3.9e-43 178.7 171 57.9
Gohir.D12G064000 Gossypium hirsutum HOM05D004708 ORTHO05D005573 1.9e-42 176.4 105 79.0
Mapoly0065s0018 Marchantia polymorpha HOM05D004708 ORTHO05D005573 3.3e-42 175.6 167 56.3
Lj2A454G55 Lonicera japonica HOM05D004708 ORTHO05D005573 5.6e-42 174.9 143 61.5
Peaxi162Scf00130g00618 Petunia axillaris HOM05D004708 ORTHO05D005573 5.2e-40 168.3 175 52.6
Nitab4.5_0009165g0010 Nicotiana tabacum HOM05D000001 ORTHO05D013582 5.8e-39 164.9 104 78.8
CSS0019358 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 7.5e-39 164.5 117 73.5
PSO731G0046 Papaver somniferum HOM05D004708 ORTHO05D005573 2.4e-37 159.5 113 72.6
FAN11G2897 Fragaria x ananassa HOM05D004708 ORTHO05D009899 1.3e-35 153.7 164 52.4
PSO384G2349 Papaver somniferum HOM05D004708 ORTHO05D005573 2.3e-35 152.9 159 53.5
CBR_g4476 Chara braunii HOM05D003322 ORTHO05D004228 3.9e-35 152.1 149 51.7
Nn7g38122 Nelumbo nucifera HOM05D004708 ORTHO05D005573 4.3e-34 148.7 98 71.4
Os02g0134000 Oryza sativa ssp. japonica HOM05D004708 ORTHO05D005573 9.5e-34 147.5 112 66.1
BraA09t36827Z Brassica rapa HOM05D004708 ORTHO05D005573 2.6e-31 139.4 99 70.7
CAN.G2875.1 Capsicum annuum HOM05D004708 ORTHO05D005573 1.9e-29 133.3 95 73.7
Actinidia33865 Actinidia chinensis HOM05D004708 ORTHO05D005573 7.1e-29 131.3 94 75.5
AagrBONN_evm.TU.Sc2ySwM_228.2017 Anthoceros agrestis HOM05D004708 ORTHO05D005573 8.7e-27 124.4 111 62.2
Pp3c18_18790 Physcomitrium patens HOM05D004708 ORTHO05D005573 1.8e-24 116.7 152 45.4
FAN26G2067 Fragaria x ananassa HOM05D004708 ORTHO05D005573 1.5e-23 113.6 73 69.9
arahy.Tifrunner.gnm1.ann1.W5EA8A Arachis hypogaea HOM05D004708 ORTHO05D005573 6.4e-22 108.2 89 65.2
Cre13.g590550 Chlamydomonas reinhardtii HOM05D004708 ORTHO05D005573 2.1e-20 103.2 175 34.9
AagrBONN_evm.TU.Sc2ySwM_368.1168 Anthoceros agrestis HOM05D004708 ORTHO05D005573 7.8e-20 101.3 66 77.3
HanXRQChr17g0534461 Helianthus annuus HOM05D004708 ORTHO05D005573 5.1e-19 98.6 67 68.7
CAN.G53.14 Capsicum annuum HOM05D004708 ORTHO05D005573 1.5e-18 97.1 60 75.0
C09p74780 Brassica napus HOM05D004708 ORTHO05D005573 9.6e-18 94.4 59 79.7
C09p74830 Brassica napus HOM05D004708 ORTHO05D005573 9.6e-18 94.4 59 79.7
SGA_v2.0_scaffold276G46612 Striga asiatica HOM05D004708 ORTHO05D005573 2.2e-14 83.2 118 45.8
CAN.G53.15 Capsicum annuum HOM05D004708 ORTHO05D005573 1.1e-13 80.9 58 72.4
BcaC06g36392 Brassica carinata HOM05D000492 ORTHO05D005571 1.4e-13 80.5 52 73.1
Cfa027114 Carpinus fangiana HOM05D004708 ORTHO05D005573 4.2e-13 79.0 193 32.1
MCO08G231 Micromonas commoda HOM05D004708 ORTHO05D005573 7.9e-12 74.7 164 31.7
Oeu044133.1 Olea europaea HOM05D004708 ORTHO05D005573 1.3e-11 73.9 45 77.8
PRCOL_00004729 Prasinoderma coloniale HOM05D004708 ORTHO05D005573 8.7e-11 71.2 152 35.5
Actinidia12710 Actinidia chinensis HOM05D004708 ORTHO05D005573 4.0e-08 62.4 48 60.4


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