Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0002190 Simmondsia chinensis HOM05D003676 ORTHO05D004262 1.2e-173 613.2 340 100.0
Sc07g0000980 Simmondsia chinensis HOM05D003676 ORTHO05D004262 2.0e-59 233.8 340 45.6
Hund16490 Selenicereus undatus HOM05D003676 ORTHO05D004262 6.5e-55 218.8 396 42.4
Lj2A468T73 Lonicera japonica HOM05D003676 ORTHO05D004262 3.2e-54 216.5 375 44.3
CSS0021991 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 1.2e-53 214.5 372 43.5
AUR62029464 Chenopodium quinoa HOM05D003676 ORTHO05D004262 1.2e-53 214.5 372 43.0
Manes.01G145700 Manihot esculenta HOM05D003676 ORTHO05D004262 1.2e-53 214.5 368 42.1
Hund14045 Selenicereus undatus HOM05D003676 ORTHO05D004262 1.6e-53 214.2 369 45.5
CSS0022685 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 2.7e-53 213.4 371 43.7
Dinv33627 Davidia involucrata HOM05D003676 ORTHO05D004262 2.3e-52 210.3 358 43.0
CiPaw.07G058500 Carya illinoinensis HOM05D003676 ORTHO05D004262 4.0e-52 209.5 368 42.1
QL06p032755 Quercus lobata HOM05D003676 ORTHO05D004262 5.2e-52 209.1 373 42.9
Nitab4.5_0005660g0010 Nicotiana tabacum HOM05D003676 ORTHO05D004262 6.7e-52 208.8 366 44.0
Sabra05G0093400 Salix brachista HOM05D003676 ORTHO05D004262 2.0e-51 207.2 397 40.1
Potri.005G114100 Populus trichocarpa HOM05D003676 ORTHO05D004262 2.6e-51 206.8 384 41.1
Prupe.7G168100 Prunus persica HOM05D003676 ORTHO05D004262 1.3e-50 204.5 379 42.0
Nitab4.5_0003382g0020 Nicotiana tabacum HOM05D003676 ORTHO05D004262 2.2e-50 203.8 356 44.1
Cc07_g10720 Coffea canephora HOM05D003676 ORTHO05D004262 1.1e-49 201.4 383 40.7
Peaxi162Scf00083g00320 Petunia axillaris HOM05D003676 ORTHO05D004262 1.1e-49 201.4 369 44.4
MSTRG.2714 Avicennia marina HOM05D003676 ORTHO05D004262 3.1e-49 199.9 387 39.5
arahy.Tifrunner.gnm1.ann1.3LB61T Arachis hypogaea HOM05D003676 ORTHO05D004262 4.1e-49 199.5 365 41.6
Lj4g0000664 Lotus japonicus HOM05D003676 ORTHO05D004262 7.0e-49 198.7 343 44.0
arahy.Tifrunner.gnm1.ann1.CCI0LY Arachis hypogaea HOM05D003676 ORTHO05D004262 1.2e-48 198.0 365 41.4
Dinv40087 Davidia involucrata HOM05D003676 ORTHO05D004262 1.6e-48 197.6 367 42.5
MD02G1132500 Malus domestica HOM05D003676 ORTHO05D004262 1.6e-48 197.6 388 41.5
Cfa006972 Carpinus fangiana HOM05D003676 ORTHO05D004262 2.0e-48 197.2 378 41.5
MD15G1246000 Malus domestica HOM05D003676 ORTHO05D004262 3.5e-48 196.4 385 41.6
Medtr8g075950 Medicago truncatula HOM05D003676 ORTHO05D004262 3.5e-48 196.4 358 40.2
Lalb_Chr05g0212401 Lupinus albus HOM05D003676 ORTHO05D004262 5.9e-48 195.7 357 41.7
vmacro18414 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 1.0e-47 194.9 375 42.1
Ciclev10025949m.g Citrus clementina HOM05D003676 ORTHO05D004262 1.3e-47 194.5 362 40.9
Psat4g099080 Pisum sativum HOM05D003676 ORTHO05D004262 1.3e-47 194.5 363 40.8
Nn5g30150 Nelumbo nucifera HOM05D003676 ORTHO05D004262 5.0e-47 192.6 379 41.7
TAR376G0994 Trochodendron aralioides HOM05D003676 ORTHO05D004262 5.0e-47 192.6 347 43.8
TPR.G30058 Trifolium pratense HOM05D003676 ORTHO05D004262 6.5e-47 192.2 371 40.2
CSS0018215 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 8.5e-47 191.8 384 40.4
Thecc.01G019000 Theobroma cacao HOM05D003676 ORTHO05D004262 1.1e-46 191.4 389 40.4
Duzib187G0981 Durio zibethinus HOM05D003676 ORTHO05D004262 1.9e-46 190.7 388 39.7
Hma1.2p1_0956F.1_g241320 Hydrangea macrophylla HOM05D003676 ORTHO05D004262 4.2e-46 189.5 393 41.2
Manes.02G104500 Manihot esculenta HOM05D003676 ORTHO05D004262 7.2e-46 188.7 320 41.9
CANSAT01G0038 Cannabis sativa HOM05D003676 ORTHO05D004262 1.2e-45 188.0 350 40.3
Cpa.g.sc6.251 Carica papaya HOM05D003676 ORTHO05D004262 1.2e-45 188.0 379 41.2
ClCG10G000750 Citrullus lanatus HOM05D003676 ORTHO05D004262 1.6e-45 187.6 385 39.7
Glyma.02G048700 Glycine max HOM05D003676 ORTHO05D004262 2.1e-45 187.2 373 41.6
CAN.G1671.14 Capsicum annuum HOM05D003676 ORTHO05D004262 8.0e-45 185.3 376 41.5
Ah.03g148760 Amaranthus hybridus HOM05D003676 ORTHO05D004262 1.0e-44 184.9 347 39.5
PGSC0003DMG400003640 Solanum tuberosum HOM05D003676 ORTHO05D004262 1.0e-44 184.9 333 42.6
RcHm_v2.0_Chr2g0099451 Rosa chinensis HOM05D003676 ORTHO05D004262 1.4e-44 184.5 358 42.2
TAR381G0332 Trochodendron aralioides HOM05D003676 ORTHO05D004262 1.4e-44 184.5 381 39.9
AT5G66230 Arabidopsis thaliana HOM05D003676 ORTHO05D003783 1.8e-44 184.1 353 39.1
CsaV3_3G000800 Cucumis sativus L. HOM05D003676 ORTHO05D004262 1.8e-44 184.1 381 39.6
Eucgr.I02350 Eucalyptus grandis HOM05D003676 ORTHO05D004262 1.8e-44 184.1 382 38.5
CARHR281500 Cardamine hirsuta HOM05D003676 ORTHO05D004262 2.3e-44 183.7 352 41.5
Solyc02g083890.4 Solanum lycopersicum HOM05D003676 ORTHO05D004262 3.0e-44 183.3 366 41.5
Hma1.2p1_0258F.1_g104145 Hydrangea macrophylla HOM05D003676 ORTHO05D004262 4.0e-44 183.0 330 42.7
TAR628G0168 Trochodendron aralioides HOM05D003676 ORTHO05D004262 4.0e-44 183.0 360 40.8
Sopen02g028680 Solanum pennellii HOM05D003676 ORTHO05D004262 5.2e-44 182.6 371 41.5
Glyma.16G128800 Glycine max HOM05D003676 ORTHO05D004262 8.8e-44 181.8 368 42.9
Phvul.003G262100 Phaseolus vulgaris HOM05D003676 ORTHO05D004262 2.0e-43 180.6 354 39.5
MELO3C013767.2 Cucumis melo HOM05D003676 ORTHO05D004262 4.4e-43 179.5 389 39.1
Sed0017342 Sechium edule HOM05D003676 ORTHO05D004262 4.4e-43 179.5 376 39.6
VMungo0251G0225 Vigna mungo HOM05D003676 ORTHO05D004262 9.8e-43 178.3 371 38.5
Thhalv10004614m.g Eutrema salsugineum HOM05D003676 ORTHO05D004262 1.7e-42 177.6 362 39.8
TWI09G1351 Tripterygium wilfordii HOM05D003676 ORTHO05D004262 2.2e-42 177.2 295 44.1
Actinidia17444 Actinidia chinensis HOM05D003676 ORTHO05D004262 3.7e-42 176.4 366 38.8
AUR62003369 Chenopodium quinoa HOM05D003676 ORTHO05D004262 4.8e-42 176.0 353 39.7
HanXRQChr09g0256601 Helianthus annuus HOM05D003676 ORTHO05D004262 1.1e-41 174.9 263 45.2
FAN26G1220 Fragaria x ananassa HOM05D003676 ORTHO05D004262 1.4e-41 174.5 375 40.3
Aa31LG1G14730 Aethionema arabicum HOM05D003676 ORTHO05D004262 1.8e-41 174.1 351 39.0
Ca_22374_v3 Cicer arietinum L. HOM05D003676 ORTHO05D004262 2.4e-41 173.7 346 39.0
FAN23G0443 Fragaria x ananassa HOM05D003676 ORTHO05D004262 4.1e-41 172.9 376 39.9
MBI05_g37447_MAGBIO Magnolia biondii HOM05D003676 ORTHO05D004262 4.1e-41 172.9 356 39.6
Duzib264G0036 Durio zibethinus HOM05D003676 ORTHO05D004262 5.4e-41 172.6 384 39.6
Atru.chr3.798 Acer truncatum HOM05D003676 ORTHO05D004262 7.0e-41 172.2 375 39.5
DCAR_016607 Daucus carota HOM05D003676 ORTHO05D004262 2.7e-40 170.2 375 38.7
FvH4_1g11840 Fragaria vesca HOM05D003676 ORTHO05D004262 7.7e-40 168.7 397 38.8
Nn1g05889 Nelumbo nucifera HOM05D003676 ORTHO05D004262 7.7e-40 168.7 367 40.1
FAN19G1818 Fragaria x ananassa HOM05D003676 ORTHO05D004262 1.3e-39 167.9 384 39.1
Actinidia30997 Actinidia chinensis HOM05D003676 ORTHO05D004262 1.7e-39 167.5 367 40.1
Glyma.01G166300 Glycine max HOM05D003676 ORTHO05D004262 2.2e-39 167.2 363 39.1
THA.LOC104819178 Tarenaya hassleriana HOM05D003676 ORTHO05D004262 3.8e-39 166.4 351 39.0
Carub.0008s2827 Capsella rubella HOM05D003676 ORTHO05D004262 1.5e-38 164.5 307 40.7
COL.COLO4_21910 Corchorus olitorius HOM05D003676 ORTHO05D004262 1.9e-38 164.1 323 41.5
Oeu048461.1 Olea europaea HOM05D003676 ORTHO05D004262 1.9e-38 164.1 307 43.0
SalBow3G1193 Salvia bowleyana HOM05D003676 ORTHO05D004262 1.9e-38 164.1 319 42.3
PSO541G5658 Papaver somniferum HOM05D003676 ORTHO05D004262 2.5e-38 163.7 385 38.7
GSVIVG01018782001 Vitis vinifera HOM05D003676 ORTHO05D004262 9.4e-38 161.8 232 47.4
ECA232G1625 Erigeron canadensis HOM05D003676 ORTHO05D004262 2.7e-37 160.2 349 37.8
unitig_736.g22721 Utricularia gibba HOM05D003676 ORTHO05D004262 2.7e-37 160.2 323 40.2
PGR119G1864 Punica granatum HOM05D003676 ORTHO05D004262 3.6e-37 159.8 397 36.0
Gohir.D11G182900 Gossypium hirsutum HOM05D003676 ORTHO05D004262 6.1e-37 159.1 353 38.5
PSO675G7127 Papaver somniferum HOM05D003676 ORTHO05D004262 6.1e-37 159.1 389 38.8
Gorai.007G194900 Gossypium raimondii HOM05D003676 ORTHO05D004262 1.4e-36 157.9 347 38.9
Rhsim08G0033700 Rhododendron simsii HOM05D003676 ORTHO05D004262 1.4e-36 157.9 380 37.9
Gohir.A11G175400 Gossypium hirsutum HOM05D003676 ORTHO05D004262 2.3e-36 157.1 345 38.8
Rhsim10G0212200 Rhododendron simsii HOM05D003676 ORTHO05D004262 2.3e-36 157.1 382 37.7
Aqoxy6G02292 Aquilegia oxysepala HOM05D003676 ORTHO05D004262 5.2e-36 156.0 351 38.7
Lj4A218T52 Lonicera japonica HOM05D003676 ORTHO05D004262 5.2e-36 156.0 362 37.6
A09p10110 Brassica napus HOM05D003676 ORTHO05D004262 8.8e-36 155.2 360 37.8
FAN28G1902 Fragaria x ananassa HOM05D003676 ORTHO05D004262 8.8e-36 155.2 365 37.5
Oeu063192.2 Olea europaea HOM05D003676 ORTHO05D004262 1.2e-35 154.8 328 39.3
Sp2g30470 Schrenkiella parvula HOM05D003676 ORTHO05D004262 1.5e-35 154.5 352 37.5
MBI05_g30743_MAGBIO Magnolia biondii HOM05D003676 ORTHO05D004262 2.6e-35 153.7 338 38.8
BraA09t36654Z Brassica rapa HOM05D003676 ORTHO05D004262 5.7e-35 152.5 362 36.2
Phvul.002G108800 Phaseolus vulgaris HOM05D003676 ORTHO05D004262 9.8e-35 151.8 340 39.1
Glyma.11G077200 Glycine max HOM05D003676 ORTHO05D004262 2.8e-34 150.2 365 38.1
BolC9t54086H Brassica oleracea HOM05D003676 ORTHO05D004262 4.9e-34 149.4 369 36.6
SGA_v2.0_scaffold78G25382 Striga asiatica HOM05D003676 ORTHO05D004262 6.3e-34 149.1 340 38.5
C09p11980 Brassica napus HOM05D003676 ORTHO05D004262 1.4e-33 147.9 365 36.4
Lsat_1_v5_gn_4_146360 Lactuca sativa HOM05D003676 ORTHO05D004262 1.4e-33 147.9 279 39.1
TWI53G0168 Tripterygium wilfordii HOM05D003676 ORTHO05D004262 1.4e-33 147.9 389 37.8
Sp5g10990 Schrenkiella parvula HOM05D003676 ORTHO05D004262 1.8e-33 147.5 342 36.3
Gohir.A02G170700 Gossypium hirsutum HOM05D003676 ORTHO05D004262 4.1e-33 146.4 326 36.8
Gohir.D03G009400 Gossypium hirsutum HOM05D003676 ORTHO05D004262 4.1e-33 146.4 327 37.9
AL5G31630 Arabidopsis lyrata HOM05D003676 ORTHO05D004262 1.6e-32 144.4 337 37.1
Medtr5g022010 Medicago truncatula HOM05D003676 ORTHO05D004262 1.6e-32 144.4 343 36.7
Gorai.008G063100 Gossypium raimondii HOM05D003676 ORTHO05D004262 2.7e-32 143.7 369 36.3
unitig_899.g14713 Utricularia gibba HOM05D003676 ORTHO05D004262 2.7e-32 143.7 285 39.3
Actinidia22976 Actinidia chinensis HOM05D003676 ORTHO05D004262 3.5e-32 143.3 302 37.1
Ca_25824_v3 Cicer arietinum L. HOM05D003676 ORTHO05D004262 4.5e-32 142.9 354 35.0
Gohir.A12G059600 Gossypium hirsutum HOM05D003676 ORTHO05D004262 5.9e-32 142.5 374 35.3
Gohir.D12G060000 Gossypium hirsutum HOM05D003676 ORTHO05D004262 5.9e-32 142.5 372 36.0
Gorai.007G195000 Gossypium raimondii HOM05D003676 ORTHO05D004262 7.7e-32 142.1 310 40.3
Lsat_1_v5_gn_3_74521 Lactuca sativa HOM05D003676 ORTHO05D004262 7.7e-32 142.1 266 41.4
Haze_03763 Corylus avellana HOM05D003676 ORTHO05D004262 1.3e-31 141.4 167 53.9
Gohir.D11G183000 Gossypium hirsutum HOM05D003676 ORTHO05D004262 1.3e-31 141.4 311 40.2
AL8G45300 Arabidopsis lyrata HOM05D003676 ORTHO05D004262 5.0e-31 139.4 212 44.3
TPR.G18183 Trifolium pratense HOM05D003676 ORTHO05D004262 1.9e-30 137.5 354 36.2
HanXRQChr15g0487251 Helianthus annuus HOM05D003676 ORTHO05D004262 2.5e-30 137.1 269 40.5
Nn1g05888 Nelumbo nucifera HOM05D003676 ORTHO05D004262 5.6e-30 136.0 331 35.3
Gorai.003G009600 Gossypium raimondii HOM05D003676 ORTHO05D004262 1.6e-29 134.4 361 34.9
Lalb_Chr09g0321731 Lupinus albus HOM05D003676 ORTHO05D004262 1.6e-29 134.4 333 33.9
HPP92_020902 Vanilla planifolia HOM05D003676 ORTHO05D004262 1.6e-29 134.4 369 36.0
Zm00001eb224920 Zea mays HOM05D003676 ORTHO05D004262 3.6e-29 133.3 368 33.2
Oeu012589.1 Olea europaea HOM05D003676 ORTHO05D004262 6.1e-29 132.5 254 40.9
ECA246G1385 Erigeron canadensis HOM05D003676 ORTHO05D004262 5.7e-27 125.9 240 41.7
CDE05G2608 Ceratophyllum demersum HOM05D003676 ORTHO05D004262 7.5e-27 125.6 296 38.5
Solyc02g062170.3 Solanum lycopersicum HOM05D003676 ORTHO05D004262 8.3e-26 122.1 263 36.1
Os10g0577400 Oryza sativa ssp. japonica HOM05D003676 ORTHO05D004262 1.1e-25 121.7 339 36.0
PGSC0003DMG400023891 Solanum tuberosum HOM05D003676 ORTHO05D004262 1.4e-25 121.3 277 36.8
DCAR_025998 Daucus carota HOM05D003676 ORTHO05D004262 2.0e-24 117.5 219 42.5
Sopen02g013140 Solanum pennellii HOM05D003676 ORTHO05D004262 2.0e-24 117.5 263 35.4
SHI32179 Sapria himalayana HOM05D003676 ORTHO05D004262 5.9e-24 115.9 325 33.2
CDE05G0776 Ceratophyllum demersum HOM05D003676 ORTHO05D004262 7.8e-24 115.5 252 40.9
Psat2g154560 Pisum sativum HOM05D003676 ORTHO05D004262 1.3e-23 114.8 331 34.1
Potri.007G057800 Populus trichocarpa HOM05D003676 ORTHO05D004262 1.3e-23 114.8 373 31.1
Migut.H01153 Erythranthe guttata HOM05D003676 ORTHO05D004262 1.5e-22 111.3 294 33.7
BcaNung00393 Brassica carinata HOM05D003676 ORTHO05D004262 3.3e-22 110.2 268 34.7
Zm00001eb024930 Zea mays HOM05D003676 ORTHO05D004262 4.3e-22 109.8 302 34.8
BcaC09g50089 Brassica carinata HOM05D003676 ORTHO05D004262 1.2e-21 108.2 271 33.9
C01p29220 Brassica napus HOM05D003676 ORTHO05D004262 1.2e-21 108.2 271 33.9
AT3G51230 Arabidopsis thaliana HOM05D003676 ORTHO05D004262 3.6e-21 106.7 197 43.7
A01p23560 Brassica napus HOM05D003676 ORTHO05D004262 6.2e-21 105.9 271 32.8
BraA01t02262Z Brassica rapa HOM05D003676 ORTHO05D004262 6.2e-21 105.9 271 32.8
CARHR160810 Cardamine hirsuta HOM05D003676 ORTHO05D004262 5.8e-19 99.4 209 39.7
Nitab4.5_0000188g0110 Nicotiana tabacum HOM05D003676 ORTHO05D004262 1.3e-18 98.2 185 41.1
SEGI_09532 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 6.4e-18 95.9 360 30.6
SEGI_21114 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 6.4e-18 95.9 360 30.6
Nitab4.5_0002337g0030 Nicotiana tabacum HOM05D003676 ORTHO05D004262 1.4e-17 94.7 283 36.0
Atru.chr1.3640 Acer truncatum HOM05D003676 ORTHO05D004262 3.2e-17 93.6 121 55.4
Carub.0005s1760 Capsella rubella HOM05D003676 ORTHO05D004262 3.2e-17 93.6 205 42.0
BcaNung04494 Brassica carinata HOM05D003676 ORTHO05D004262 5.0e-15 86.3 281 29.9
ATR0149G006 Amborella trichopoda HOM05D003676 ORTHO05D004262 1.9e-14 84.3 260 33.8
RcHm_v2.0_Chr6g0272671 Rosa chinensis HOM05D003676 ORTHO05D004262 3.3e-14 83.6 135 45.2
HanXRQChr16g0531461 Helianthus annuus HOM05D003676 ORTHO05D004262 1.7e-10 71.2 224 33.9
Gorai.010G060700 Gossypium raimondii HOM05D003676 ORTHO05D004262 1.1e-09 68.6 93 53.8
TAR629G3197 Trochodendron aralioides HOM05D003676 ORTHO05D004262 7.1e-09 65.9 147 39.5
vmacro22131 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 7.8e-08 62.4 360 26.4
SEGI_24904 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 1.3e-07 61.6 258 29.1
vmacro23249 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 1.3e-07 61.6 330 28.5
vmacro23473 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 1.3e-07 61.6 330 28.5
Gohir.D09G239350 Gossypium hirsutum HOM05D003676 ORTHO05D004262 5.1e-07 59.7 75 48.0
Gorai.006G262100 Gossypium raimondii HOM05D003676 ORTHO05D004262 1.1e-06 58.5 66 51.5
Atru.chr1.3647 Acer truncatum HOM05D003676 ORTHO05D004262 1.9e-06 57.8 183 32.2


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