Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0002120 Simmondsia chinensis HOM05D007514 ORTHO05D009469 1.7e-85 319.3 159 100.0
MSTRG.883 Avicennia marina HOM05D007514 ORTHO05D009469 1.6e-40 169.9 162 58.0
Oeu059507.1 Olea europaea HOM05D007514 ORTHO05D009469 5.2e-39 164.9 158 54.4
Migut.L00252 Erythranthe guttata HOM05D007514 ORTHO05D009469 1.1e-36 157.1 162 54.9
Migut.L00394 Erythranthe guttata HOM05D007514 ORTHO05D009469 1.1e-36 157.1 162 54.9
Nn6g32368 Nelumbo nucifera HOM05D007514 ORTHO05D009469 9.2e-36 154.1 115 69.6
AUR62011597 Chenopodium quinoa HOM05D007514 ORTHO05D009469 1.2e-35 153.7 131 59.5
Ah.01g021120 Amaranthus hybridus HOM05D007514 ORTHO05D009469 3.5e-35 152.1 166 52.4
Cc07_g10640 Coffea canephora HOM05D007514 ORTHO05D009469 3.5e-35 152.1 111 66.7
PSO541G1849 Papaver somniferum HOM05D007514 ORTHO05D009469 3.5e-35 152.1 162 52.5
TWI09G1362 Tripterygium wilfordii HOM05D007514 ORTHO05D009469 3.5e-35 152.1 148 58.1
Manes.02G103801 Manihot esculenta HOM05D007514 ORTHO05D009469 4.6e-35 151.8 161 53.4
Potri.005G115000 Populus trichocarpa HOM05D007514 ORTHO05D009469 4.6e-35 151.8 141 58.2
Aqoxy5G01772 Aquilegia oxysepala HOM05D007514 ORTHO05D009469 6.0e-35 151.4 154 53.2
CSS0010041 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 1.0e-34 150.6 158 55.1
CSS0030936 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 1.0e-34 150.6 158 55.1
Cpa.g.sc6.242 Carica papaya HOM05D007514 ORTHO05D009469 3.9e-34 148.7 128 60.2
Thecc.01G019700 Theobroma cacao HOM05D007514 ORTHO05D009469 3.9e-34 148.7 116 64.7
Hma1.2p1_0743F.1_g211610 Hydrangea macrophylla HOM05D007514 ORTHO05D009469 6.6e-34 147.9 175 50.9
PSO675G8043 Papaver somniferum HOM05D007514 ORTHO05D009469 6.6e-34 147.9 151 54.3
DCAR_016611 Daucus carota HOM05D007514 ORTHO05D009469 1.9e-33 146.4 162 48.1
Sabra05G0094100 Salix brachista HOM05D007514 ORTHO05D009469 2.5e-33 146.0 112 63.4
COL.COLO4_21918 Corchorus olitorius HOM05D007514 ORTHO05D009469 5.6e-33 144.8 116 66.4
Ciclev10026620m.g Citrus clementina HOM05D007514 ORTHO05D009469 7.3e-33 144.4 139 56.8
PGR119G2084 Punica granatum HOM05D007514 ORTHO05D009469 1.2e-32 143.7 145 56.6
THA.LOC104819752 Tarenaya hassleriana HOM05D007514 ORTHO05D009469 1.2e-32 143.7 139 59.0
Duzib264G0291 Durio zibethinus HOM05D007514 ORTHO05D009469 1.6e-32 143.3 113 63.7
A07p02710 Brassica napus HOM05D007514 ORTHO05D009469 2.8e-32 142.5 105 67.6
BraA07t28071Z Brassica rapa HOM05D007514 ORTHO05D009469 2.8e-32 142.5 105 67.6
Carub.0003s3210 Capsella rubella HOM05D007514 ORTHO05D009469 2.8e-32 142.5 104 66.3
BcaC06g36349 Brassica carinata HOM05D007514 ORTHO05D009469 3.6e-32 142.1 105 67.6
C07p05010 Brassica napus HOM05D007514 ORTHO05D009469 3.6e-32 142.1 105 67.6
BolC7t40902H Brassica oleracea HOM05D007514 ORTHO05D009469 3.6e-32 142.1 105 67.6
unitig_26.g10012 Utricularia gibba HOM05D007514 ORTHO05D009469 3.6e-32 142.1 157 52.9
PGSC0003DMG401003636 Solanum tuberosum HOM05D007514 ORTHO05D009469 4.7e-32 141.7 154 51.3
MD02G1133200 Malus domestica HOM05D007514 ORTHO05D009469 1.4e-31 140.2 159 52.8
BcaB03g16581 Brassica carinata HOM05D007514 ORTHO05D009469 1.8e-31 139.8 129 56.6
Lsat_1_v5_gn_3_74241 Lactuca sativa HOM05D007514 ORTHO05D009469 1.8e-31 139.8 107 61.7
Sed0026037 Sechium edule HOM05D007514 ORTHO05D009469 1.8e-31 139.8 172 50.0
Aa31LG8G15140 Aethionema arabicum HOM05D007514 ORTHO05D009469 2.3e-31 139.4 131 59.5
AL3G51000 Arabidopsis lyrata HOM05D007514 ORTHO05D009469 4.0e-31 138.7 106 65.1
CiPaw.07G058000 Carya illinoinensis HOM05D007514 ORTHO05D009469 5.2e-31 138.3 172 49.4
AT2G17972 Arabidopsis thaliana HOM05D007514 ORTHO05D009469 1.2e-30 137.1 106 64.2
CARHR108460 Cardamine hirsuta HOM05D007514 ORTHO05D009469 1.5e-30 136.7 105 66.7
Sp3g31390 Schrenkiella parvula HOM05D007514 ORTHO05D009469 2.0e-30 136.3 108 64.8
Thhalv10022884m.g Eutrema salsugineum HOM05D007514 ORTHO05D009469 2.6e-30 136.0 107 63.6
Gohir.A02G170200 Gossypium hirsutum HOM05D007514 ORTHO05D009469 2.6e-30 136.0 112 60.7
VMungo0251G0111 Vigna mungo HOM05D007514 ORTHO05D009469 3.4e-30 135.6 123 57.7
SGA_v2.0_scaffold234G43648 Striga asiatica HOM05D007514 ORTHO05D009469 4.4e-30 135.2 121 57.9
Gorai.003G010100 Gossypium raimondii HOM05D007514 ORTHO05D009469 1.3e-29 133.7 112 59.8
TAR365G0263 Trochodendron aralioides HOM05D007514 ORTHO05D009469 1.3e-29 133.7 145 54.5
Gohir.D03G009800 Gossypium hirsutum HOM05D007514 ORTHO05D009469 3.7e-29 132.1 112 59.8
TAR365G1204 Trochodendron aralioides HOM05D007514 ORTHO05D009469 6.4e-29 131.3 145 53.8
ClCG01G020240 Citrullus lanatus HOM05D007514 ORTHO05D009469 8.4e-29 131.0 69 84.1
MBI05_g15346_MAGBIO Magnolia biondii HOM05D007514 ORTHO05D009469 1.4e-28 130.2 161 49.1
MELO3C007896.2 Cucumis melo HOM05D007514 ORTHO05D009469 1.9e-28 129.8 96 70.8
Phvul.003G262200 Phaseolus vulgaris HOM05D007514 ORTHO05D009469 1.9e-28 129.8 121 57.0
Prupe.7G167500 Prunus persica HOM05D007514 ORTHO05D009469 1.9e-28 129.8 162 47.5
Rhsim08G0034000 Rhododendron simsii HOM05D007514 ORTHO05D009469 5.4e-28 128.3 102 63.7
QL06p032616 Quercus lobata HOM05D007514 ORTHO05D009469 7.1e-28 127.9 106 62.3
arahy.Tifrunner.gnm1.ann1.EYR4CZ Arachis hypogaea HOM05D007514 ORTHO05D009469 1.2e-27 127.1 76 76.3
CsaV3_6G047030 Cucumis sativus L. HOM05D007514 ORTHO05D009469 1.2e-27 127.1 162 47.5
EL10Ac9g21968 Beta vulgaris HOM05D007514 ORTHO05D009469 1.6e-27 126.7 71 78.9
Glyma.16G128900 Glycine max HOM05D007514 ORTHO05D009469 1.6e-27 126.7 114 60.5
CANSAT01G2848 Cannabis sativa HOM05D007514 ORTHO05D009469 3.5e-27 125.6 71 81.7
HPP92_025365 Vanilla planifolia HOM05D007514 ORTHO05D009469 3.5e-27 125.6 102 65.7
Peaxi162Scf00083g00065 Petunia axillaris HOM05D007514 ORTHO05D009469 7.8e-27 124.4 162 44.4
Cfa006967 Carpinus fangiana HOM05D007514 ORTHO05D009469 1.7e-26 123.2 71 77.5
Dinv33625 Davidia involucrata HOM05D007514 ORTHO05D009469 3.0e-26 122.5 142 50.0
arahy.Tifrunner.gnm1.ann1.JXSY0Y Arachis hypogaea HOM05D007514 ORTHO05D009469 5.1e-26 121.7 118 59.3
Lalb_Chr05g0229901 Lupinus albus HOM05D007514 ORTHO05D009469 8.6e-26 120.9 93 61.3
FvH4_1g11940 Fragaria vesca HOM05D007514 ORTHO05D009469 1.1e-25 120.6 71 76.1
FAN19G0235 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.1e-25 120.6 71 76.1
FAN23G2896 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.1e-25 120.6 71 76.1
FAN26G2491 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.1e-25 120.6 71 76.1
Glyma.02G048800 Glycine max HOM05D007514 ORTHO05D009469 1.9e-25 119.8 100 59.0
TPR.G30050 Trifolium pratense HOM05D007514 ORTHO05D009469 1.9e-25 119.8 103 58.3
Zm00001eb228020 Zea mays HOM05D007514 ORTHO05D009469 3.3e-25 119.0 77 66.2
Nitab4.5_0001959g0010 Nicotiana tabacum HOM05D007514 ORTHO05D009469 4.3e-25 118.6 164 43.9
Os06g0715200 Oryza sativa ssp. japonica HOM05D007514 ORTHO05D009469 4.3e-25 118.6 78 69.2
Nitab4.5_0006286g0070 Nicotiana tabacum HOM05D007514 ORTHO05D009469 5.6e-25 118.2 84 64.3
Ca_22373_v3 Cicer arietinum L. HOM05D007514 ORTHO05D009469 7.3e-25 117.9 152 46.7
Lj4g0013490 Lotus japonicus HOM05D007514 ORTHO05D009469 7.3e-25 117.9 99 57.6
Haze_03771 Corylus avellana HOM05D007514 ORTHO05D009469 1.6e-24 116.7 161 44.7
Atru.chr3.793 Acer truncatum HOM05D007514 ORTHO05D009469 8.1e-24 114.4 95 60.0
Lj2P467T19 Lonicera japonica HOM05D007514 ORTHO05D009469 1.1e-23 114.0 90 58.9
Sopen02g028770 Solanum pennellii HOM05D007514 ORTHO05D009469 3.1e-23 112.5 84 60.7
Psat4g099040 Pisum sativum HOM05D007514 ORTHO05D009469 4.0e-23 112.1 115 50.4
Duzib147G0981 Durio zibethinus HOM05D007514 ORTHO05D009469 6.8e-23 111.3 102 54.9
SMO353G0320 Selaginella moellendorffii HOM05D007514 ORTHO05D009469 1.2e-22 110.5 126 48.4
Medtr8g075960 Medicago truncatula HOM05D007514 ORTHO05D009469 1.5e-22 110.2 96 54.2
AagrBONN_evm.TU.Sc2ySwM_344.4071 Anthoceros agrestis HOM05D007514 ORTHO05D009469 4.4e-22 108.6 104 52.9
arahy.Tifrunner.gnm1.ann1.KXHU4R Arachis hypogaea HOM05D007514 ORTHO05D009469 9.9e-22 107.5 70 72.9
Pp3c15_14110 Physcomitrium patens HOM05D007514 ORTHO05D009469 8.7e-18 94.4 102 46.1
FAN28G1094 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.5e-17 93.6 119 44.5
Mapoly0011s0103 Marchantia polymorpha HOM05D007514 ORTHO05D009469 1.9e-17 93.2 66 62.1
SEGI_16775 Sequoiadendron giganteum HOM05D007514 ORTHO05D009469 4.3e-17 92.0 84 54.8
CAN.G66.6 Capsicum annuum HOM05D007514 ORTHO05D009469 5.6e-17 91.7 79 58.2
Cre05.g245102 Chlamydomonas reinhardtii HOM05D007514 ORTHO05D009469 1.6e-11 73.6 113 39.8


User provided reference genes

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