Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0002090 Simmondsia chinensis HOM05D000665 ORTHO05D003147 2.3e-54 215.3 107 100.0
QL06p033492 Quercus lobata HOM05D000120 ORTHO05D000068 3.6e-36 154.8 106 71.7
Haze_03773 Corylus avellana HOM05D000665 ORTHO05D003147 4.2e-32 141.4 106 64.2
Dinv33623 Davidia involucrata HOM05D000665 ORTHO05D003147 1.9e-29 132.5 99 65.7
vmacro05149 Vaccinium macrocarpon HOM05D000665 ORTHO05D003147 8.1e-28 127.1 85 70.6
QL06p033484 Quercus lobata HOM05D004687 ORTHO05D006002 4.0e-27 124.8 85 68.2
CSS0001337 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D003147 9.0e-27 123.6 86 66.3
Actinidia22985 Actinidia chinensis HOM05D000665 ORTHO05D003147 3.4e-26 121.7 103 56.3
Rhsim04G0014700 Rhododendron simsii HOM05D000665 ORTHO05D003147 1.9e-24 115.9 103 60.2
Peaxi162Scf00439g00107 Petunia axillaris HOM05D000665 ORTHO05D003147 1.6e-23 112.8 85 60.0
Nitab4.5_0011673g0010 Nicotiana tabacum HOM05D000665 ORTHO05D003147 3.9e-22 108.2 81 60.5
PGSC0003DMG400041107 Solanum tuberosum HOM05D000665 ORTHO05D003147 1.6e-20 102.8 81 55.6
Solyc02g062220.2 Solanum lycopersicum HOM05D000665 ORTHO05D003147 2.4e-19 99.0 81 53.1
PGR119G2519 Punica granatum HOM05D000665 ORTHO05D003147 3.5e-15 85.1 104 48.1
THA.LOC104809388 Tarenaya hassleriana HOM05D000665 ORTHO05D003147 2.0e-10 69.3 73 38.4
FvH4_2g38660 Fragaria vesca HOM05D000665 ORTHO05D000140 5.5e-08 61.2 79 39.2
FAN15G1296 Fragaria x ananassa HOM05D000665 ORTHO05D003147 1.2e-07 60.1 79 38.0
Nitab4.5_0000188g0050 Nicotiana tabacum HOM05D000665 ORTHO05D003147 1.6e-07 59.7 45 55.6
FAN27G2099 Fragaria x ananassa HOM05D000665 ORTHO05D000140 2.1e-07 59.3 79 38.0
RcHm_v2.0_Chr6g0302651 Rosa chinensis HOM05D000665 ORTHO05D000140 2.1e-07 59.3 79 38.0
TWI56G1057 Tripterygium wilfordii HOM05D000665 ORTHO05D003147 2.7e-07 58.9 74 37.8
CAN.G1721.3 Capsicum annuum HOM05D000665 ORTHO05D003147 4.6e-07 58.2 71 36.6
Lj6g0013767 Lotus japonicus HOM05D000876 ORTHO05D000285 4.6e-07 58.2 70 37.1
Aa31LG4G5910 Aethionema arabicum HOM05D000665 ORTHO05D003147 1.3e-06 56.6 71 33.8
Aqoxy5G00628 Aquilegia oxysepala HOM05D000665 ORTHO05D003147 1.3e-06 56.6 85 35.3
Peaxi162Scf00544g00316 Petunia axillaris HOM05D000665 ORTHO05D003147 1.3e-06 56.6 86 34.9
Prupe.1G367300 Prunus persica HOM05D000665 ORTHO05D003147 1.8e-06 56.2 73 37.0
PSO675G7404 Papaver somniferum HOM05D000665 ORTHO05D003147 2.3e-06 55.8 72 34.7
Cc10_g01810 Coffea canephora HOM05D000665 ORTHO05D003147 3.0e-06 55.5 71 35.2
Sp5g30790 Schrenkiella parvula HOM05D000665 ORTHO05D003147 3.0e-06 55.5 72 36.1
Nitab4.5_0001936g0100 Nicotiana tabacum HOM05D000665 ORTHO05D003147 3.9e-06 55.1 86 33.7
Oeu020877.2 Olea europaea HOM05D000665 ORTHO05D003147 3.9e-06 55.1 71 35.2
Psat6g003760 Pisum sativum HOM05D000665 ORTHO05D003147 3.9e-06 55.1 76 32.9
Thhalv10018949m.g Eutrema salsugineum HOM05D000665 ORTHO05D003147 5.1e-06 54.7 68 36.8
AUR62036171 Chenopodium quinoa HOM05D000665 ORTHO05D003147 6.7e-06 54.3 72 36.1
TAR628G0739 Trochodendron aralioides HOM05D000665 ORTHO05D003147 6.7e-06 54.3 71 35.2
arahy.Tifrunner.gnm1.ann1.61NS0W Arachis hypogaea HOM05D000665 ORTHO05D003147 8.7e-06 53.9 68 33.8
MSTRG.25235 Avicennia marina HOM05D000665 ORTHO05D003147 8.7e-06 53.9 81 30.9
Cpa.g.sc1059.2 Carica papaya HOM05D000665 ORTHO05D003147 8.7e-06 53.9 72 31.9
TAR381G0952 Trochodendron aralioides HOM05D000665 ORTHO05D003147 8.7e-06 53.9 104 30.8


User provided reference genes

Program Settings