Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0001970 Simmondsia chinensis HOM05D006562 ORTHO05D008230 0.0e+00 1395.6 702 100.0
AUR62003339 Chenopodium quinoa HOM05D006562 ORTHO05D008230 9.5e-202 707.6 568 64.1
Dinv33663 Davidia involucrata HOM05D006562 ORTHO05D008230 1.1e-200 704.1 623 61.2
EL10Ac6g15524 Beta vulgaris HOM05D006562 ORTHO05D008230 3.2e-197 692.6 676 57.0
Actinidia22955 Actinidia chinensis HOM05D006562 ORTHO05D008230 1.0e-195 687.6 623 59.1
AUR62029498 Chenopodium quinoa HOM05D006562 ORTHO05D008230 2.5e-194 682.9 555 63.1
Lj2A480G48 Lonicera japonica HOM05D006562 ORTHO05D008230 1.6e-193 680.2 617 60.1
MD15G1242700 Malus domestica HOM05D006562 ORTHO05D008230 4.4e-191 672.2 611 59.4
vmacro22151 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 1.7e-190 670.2 622 58.4
vmacro22192 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 1.7e-190 670.2 622 58.5
TAR376G1060 Trochodendron aralioides HOM05D006562 ORTHO05D008230 2.2e-190 669.8 637 57.8
GSVIVG01018736001 Vitis vinifera HOM05D006562 ORTHO05D008230 4.9e-190 668.7 618 59.1
Cfa007000 Carpinus fangiana HOM05D006562 ORTHO05D008230 1.4e-189 667.2 620 57.9
CSS0025685 Camellia sinensis var. sinensis HOM05D006562 ORTHO05D008230 6.2e-185 651.7 621 56.7
QL06p051072 Quercus lobata HOM05D006562 ORTHO05D008230 8.1e-185 651.4 632 57.4
Haze_03732 Corylus avellana HOM05D006562 ORTHO05D008230 1.8e-184 650.2 656 54.4
Thecc.01G014800 Theobroma cacao HOM05D006562 ORTHO05D008230 2.2e-182 643.3 612 57.5
Potri.005G111000 Populus trichocarpa HOM05D006562 ORTHO05D008230 8.4e-182 641.3 618 56.6
Ah.03g149120 Amaranthus hybridus HOM05D006562 ORTHO05D008230 5.4e-181 638.6 623 57.1
TWI53G1373 Tripterygium wilfordii HOM05D006562 ORTHO05D008230 3.5e-180 636.0 622 56.6
Manes.01G148500 Manihot esculenta HOM05D006562 ORTHO05D008230 1.1e-178 630.9 635 54.8
Atru.chr3.853 Acer truncatum HOM05D006562 ORTHO05D008230 1.5e-178 630.6 650 54.6
Gohir.D10G089300 Gossypium hirsutum HOM05D006562 ORTHO05D008230 1.9e-178 630.2 622 55.8
Gohir.A10G098700 Gossypium hirsutum HOM05D006562 ORTHO05D008230 7.4e-178 628.2 618 55.3
Nitab4.5_0001892g0110 Nicotiana tabacum HOM05D006562 ORTHO05D008230 7.4e-178 628.2 582 57.2
FAN28G2818 Fragaria x ananassa HOM05D006562 ORTHO05D008230 1.6e-177 627.1 615 56.4
HanXRQChr15g0483891 Helianthus annuus HOM05D006562 ORTHO05D008230 1.6e-177 627.1 613 55.0
CiPaw.07G060900 Carya illinoinensis HOM05D006562 ORTHO05D008230 8.1e-177 624.8 618 54.4
Gorai.011G098200 Gossypium raimondii HOM05D006562 ORTHO05D008230 1.4e-176 624.0 622 55.6
RcHm_v2.0_Chr2g0099051 Rosa chinensis HOM05D006562 ORTHO05D008230 1.4e-176 624.0 630 55.4
DCAR_014038 Daucus carota HOM05D006562 ORTHO05D008230 2.4e-176 623.2 525 61.3
Solyc02g083600.4 Solanum lycopersicum HOM05D006562 ORTHO05D008230 4.0e-176 622.5 602 55.5
COL.COLO4_22460 Corchorus olitorius HOM05D006562 ORTHO05D008230 6.9e-176 621.7 620 54.2
FAN23G1005 Fragaria x ananassa HOM05D006562 ORTHO05D008230 6.9e-176 621.7 613 56.4
FvH4_1g11470 Fragaria vesca HOM05D006562 ORTHO05D008230 5.8e-175 618.6 619 56.7
CANSAT25G3480 Cannabis sativa HOM05D006562 ORTHO05D008230 3.8e-174 615.9 616 56.0
Lj4g0007150 Lotus japonicus HOM05D006562 ORTHO05D008230 4.9e-174 615.5 623 55.2
Sopen02g028380 Solanum pennellii HOM05D006562 ORTHO05D008230 1.4e-173 614.0 570 56.8
Eucgr.I02333 Eucalyptus grandis HOM05D006562 ORTHO05D008230 1.9e-173 613.6 609 55.5
Lsat_1_v5_gn_3_72080 Lactuca sativa HOM05D006562 ORTHO05D008230 7.1e-173 611.7 619 55.1
FAN19G2077 Fragaria x ananassa HOM05D006562 ORTHO05D008230 2.7e-172 609.8 632 55.7
Cpa.g.sc6.285 Carica papaya HOM05D006562 ORTHO05D008230 1.3e-171 607.4 639 53.4
Sabra05G0091000 Salix brachista HOM05D006562 ORTHO05D008230 7.4e-170 601.7 633 53.4
CAN.G1274.29 Capsicum annuum HOM05D006562 ORTHO05D008230 4.8e-169 599.0 532 57.1
Nitab4.5_0003187g0030 Nicotiana tabacum HOM05D006562 ORTHO05D008230 1.4e-168 597.4 606 54.1
Hund16502 Selenicereus undatus HOM05D006562 ORTHO05D008230 5.3e-168 595.5 469 64.4
Sed0025600 Sechium edule HOM05D006562 ORTHO05D008230 9.0e-168 594.7 584 53.8
Peaxi162Scf00328g00616 Petunia axillaris HOM05D006562 ORTHO05D008230 2.6e-167 593.2 637 52.4
PGSC0003DMG400003647 Solanum tuberosum HOM05D006562 ORTHO05D008230 1.0e-166 591.3 507 59.0
Oeu048479.1 Olea europaea HOM05D006562 ORTHO05D008230 3.8e-166 589.3 627 53.9
MBI05_g23389_MAGBIO Magnolia biondii HOM05D006562 ORTHO05D008230 1.9e-165 587.0 657 51.8
CsaV3_6G047340 Cucumis sativus L. HOM05D006562 ORTHO05D008230 6.0e-164 582.0 588 54.1
Ca_03628_v3 Cicer arietinum L. HOM05D006562 ORTHO05D008230 2.3e-163 580.1 639 50.7
Cc07_g11050 Coffea canephora HOM05D006562 ORTHO05D008230 3.9e-163 579.3 618 52.9
ClCG01G020460 Citrullus lanatus HOM05D006562 ORTHO05D008230 6.7e-163 578.6 605 52.7
Psat4g101960 Pisum sativum HOM05D006562 ORTHO05D008230 1.5e-162 577.4 619 51.5
Medtr8g075250 Medicago truncatula HOM05D006562 ORTHO05D008230 5.7e-162 575.5 613 52.0
TPR.G19508 Trifolium pratense HOM05D006562 ORTHO05D008230 7.4e-162 575.1 618 52.6
Migut.L00910 Erythranthe guttata HOM05D006562 ORTHO05D008230 9.7e-162 574.7 608 53.0
SGA_v2.0_scaffold229G43296 Striga asiatica HOM05D006562 ORTHO05D008230 2.8e-161 573.2 543 56.2
Phvul.003G265000 Phaseolus vulgaris HOM05D006562 ORTHO05D008230 9.0e-160 568.2 562 55.2
AL8G45460 Arabidopsis lyrata HOM05D006562 ORTHO05D008230 1.2e-159 567.8 607 53.9
Duzib187G1447 Durio zibethinus HOM05D006562 ORTHO05D008230 1.2e-159 567.8 616 53.7
Glyma.16G124500 Glycine max HOM05D006562 ORTHO05D008230 2.6e-159 566.6 617 52.4
VMungo0251G0646 Vigna mungo HOM05D006562 ORTHO05D008230 3.4e-159 566.2 617 52.5
arahy.Tifrunner.gnm1.ann1.6MN492 Arachis hypogaea HOM05D006562 ORTHO05D008230 3.8e-158 562.8 614 52.0
SalBow5G1234 Salvia bowleyana HOM05D006562 ORTHO05D008230 3.8e-158 562.8 623 51.7
arahy.Tifrunner.gnm1.ann1.X2JQ1G Arachis hypogaea HOM05D006562 ORTHO05D008230 6.5e-158 562.0 614 51.6
Aqoxy5G01815 Aquilegia oxysepala HOM05D006562 ORTHO05D008230 3.2e-157 559.7 596 51.8
Carub.0008s2836 Capsella rubella HOM05D006562 ORTHO05D008230 5.5e-157 558.9 604 53.5
AT5G66130 Arabidopsis thaliana HOM05D006562 ORTHO05D008230 1.8e-155 553.9 608 52.6
Ciclev10025220m.g Citrus clementina HOM05D006562 ORTHO05D008230 5.1e-155 552.4 525 56.0
Sp2g30560 Schrenkiella parvula HOM05D006562 ORTHO05D008230 5.1e-155 552.4 617 50.6
Lalb_Chr16g0391391 Lupinus albus HOM05D006562 ORTHO05D008230 1.1e-154 551.2 624 50.3
CARHR281620 Cardamine hirsuta HOM05D006562 ORTHO05D008230 2.5e-154 550.1 562 53.6
Thhalv10003881m.g Eutrema salsugineum HOM05D006562 ORTHO05D008230 4.8e-153 545.8 610 51.1
PGR119G1624 Punica granatum HOM05D006562 ORTHO05D008230 4.8e-153 545.8 621 50.2
Prupe.7G171500 Prunus persica HOM05D006562 ORTHO05D008230 3.4e-151 539.7 520 57.3
PSO170G3776 Papaver somniferum HOM05D006562 ORTHO05D008230 7.7e-151 538.5 635 49.3
Rhsim10G0209300 Rhododendron simsii HOM05D006562 ORTHO05D008230 2.5e-149 533.5 544 53.3
PSO700G0294 Papaver somniferum HOM05D006562 ORTHO05D008230 1.2e-148 531.2 638 48.3
BcaB04g20123 Brassica carinata HOM05D006562 ORTHO05D008230 1.3e-145 521.2 621 49.3
MELO3C007925.2 Cucumis melo HOM05D006562 ORTHO05D008230 1.3e-145 521.2 648 46.8
BcaC04g23114 Brassica carinata HOM05D006562 ORTHO05D008230 1.4e-144 517.7 566 51.1
BraA09t36658Z Brassica rapa HOM05D006562 ORTHO05D008230 4.5e-143 512.7 590 50.5
ECA246G3730 Erigeron canadensis HOM05D006562 ORTHO05D008230 7.7e-143 511.9 560 53.2
Aa31LG1G14620 Aethionema arabicum HOM05D006562 ORTHO05D008230 1.9e-141 507.3 508 54.1
MSTRG.15581 Avicennia marina HOM05D006562 ORTHO05D008230 1.9e-141 507.3 490 56.1
A09p10140 Brassica napus HOM05D006562 ORTHO05D008230 2.3e-139 500.4 598 50.2
BolC9t54092H Brassica oleracea HOM05D006562 ORTHO05D008230 2.6e-138 496.9 569 49.9
C09p12020 Brassica napus HOM05D006562 ORTHO05D008230 5.7e-138 495.7 566 50.2
unitig_37.g12438 Utricularia gibba HOM05D006562 ORTHO05D008230 5.7e-138 495.7 585 49.2
HPP92_022171 Vanilla planifolia HOM05D006562 ORTHO05D008230 9.4e-133 478.4 636 45.9
ATR0712G114 Amborella trichopoda HOM05D006562 ORTHO05D008230 3.7e-129 466.5 540 49.1
Os03g0242100 Oryza sativa ssp. japonica HOM05D006562 ORTHO05D008230 8.2e-129 465.3 523 47.6
Zm00001eb398900 Zea mays HOM05D006562 ORTHO05D008230 7.5e-122 442.2 516 47.1
SHI08537 Sapria himalayana HOM05D006562 ORTHO05D008230 1.2e-116 424.9 403 54.1
HPP92_022170 Vanilla planifolia HOM05D006562 ORTHO05D008230 9.2e-96 355.5 450 48.2
SMO329G0081 Selaginella moellendorffii HOM05D006562 ORTHO05D008230 2.8e-92 344.0 545 39.4
CDE02G3565 Ceratophyllum demersum HOM05D006562 ORTHO05D008230 8.3e-89 332.4 542 37.5
Mapoly0004s0213 Marchantia polymorpha HOM05D006562 ORTHO05D008230 1.2e-87 328.6 512 40.8
Pp3c8_14180 Physcomitrium patens HOM05D006562 ORTHO05D008230 2.5e-85 320.9 460 40.7
Dinv33664 Davidia involucrata HOM05D006562 ORTHO05D008230 2.9e-65 254.2 309 51.5
Hma1.2p1_0315F.1_g122300 Hydrangea macrophylla HOM05D006562 ORTHO05D008230 1.6e-60 238.4 188 63.8
FAN26G2549 Fragaria x ananassa HOM05D006562 ORTHO05D008230 2.9e-57 227.6 195 58.5
SEGI_24182 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 3.2e-56 224.2 382 37.4
MCO01G428 Micromonas commoda HOM05D006562 ORTHO05D008230 6.3e-36 156.8 534 27.9
PRCOL_00000425 Prasinoderma coloniale HOM05D006562 ORTHO05D008230 5.1e-30 137.1 488 27.0
Cre03.g196600 Chlamydomonas reinhardtii HOM05D006562 ORTHO05D008230 2.2e-25 121.7 618 23.1
Lsat_1_v5_gn_5_17820 Lactuca sativa HOM05D002511 ORTHO05D019442 6.5e-25 120.2 123 52.0
Hund31353 Selenicereus undatus HOM05D006562 ORTHO05D008230 1.0e-22 112.8 116 56.0
Hund31354 Selenicereus undatus HOM05D006562 ORTHO05D008230 1.0e-22 112.8 116 56.0
Hund31048 Selenicereus undatus HOM05D006562 ORTHO05D008230 5.2e-22 110.5 116 55.2
Hund31049 Selenicereus undatus HOM05D006562 ORTHO05D008230 5.2e-22 110.5 116 55.2
CBR_g51010 Chara braunii HOM05D006562 ORTHO05D008230 3.3e-21 107.8 368 29.1
Sopen10g019740 Solanum pennellii HOM05D006562 ORTHO05D008230 1.2e-15 89.4 69 60.9
SEGI_14672 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 2.0e-13 82.0 113 38.1
Lsat_1_v5_gn_5_12680 Lactuca sativa HOM05D004664 ORTHO05D005526 1.1e-08 66.2 81 51.9
CARHR071130 Cardamine hirsuta HOM05D004094 ORTHO05D004601 1.0e-06 59.7 284 24.3
Actinidia17422 Actinidia chinensis HOM05D006562 ORTHO05D008230 1.8e-06 58.9 200 29.0
Aa31LG4G7730 Aethionema arabicum HOM05D004094 ORTHO05D004601 5.2e-06 57.4 309 23.0
AT1G77620 Arabidopsis thaliana HOM05D004094 ORTHO05D004601 8.8e-06 56.6 286 22.7


User provided reference genes

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