Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0001780 Simmondsia chinensis HOM05D004598 ORTHO05D005550 1.1e-256 889.4 444 100.0
AUR62026210 Chenopodium quinoa HOM05D004598 ORTHO05D005550 4.5e-197 691.4 426 78.6
Ah.03g134220 Amaranthus hybridus HOM05D004598 ORTHO05D005550 3.5e-194 681.8 429 75.5
Hund05921 Selenicereus undatus HOM05D004598 ORTHO05D005550 3.9e-193 678.3 429 76.9
CiPaw.13G015900 Carya illinoinensis HOM05D004598 ORTHO05D005550 4.6e-186 654.8 429 73.4
Hma1.2p1_0315F.1_g122700 Hydrangea macrophylla HOM05D004598 ORTHO05D005550 7.4e-184 647.5 420 73.6
Thecc.04G114500 Theobroma cacao HOM05D004598 ORTHO05D005550 2.2e-183 646.0 426 73.0
Actinidia02429 Actinidia chinensis HOM05D004598 ORTHO05D005550 6.3e-183 644.4 429 72.5
HanXRQChr03g0066861 Helianthus annuus HOM05D004598 ORTHO05D005550 2.6e-181 639.0 432 69.9
CSS0038935 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 1.3e-180 636.7 430 72.3
CSS0039662 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 1.3e-180 636.7 430 72.3
Manes.14G169500 Manihot esculenta HOM05D004598 ORTHO05D005550 2.9e-180 635.6 428 71.0
Sopen02g028050 Solanum pennellii HOM05D004598 ORTHO05D005550 4.2e-179 631.7 430 70.5
Peaxi162Scf00300g00120 Petunia axillaris HOM05D004598 ORTHO05D005550 9.4e-179 630.6 429 70.6
Ca_23979_v3 Cicer arietinum L. HOM05D004598 ORTHO05D005550 1.2e-178 630.2 426 71.1
Gorai.001G088100 Gossypium raimondii HOM05D004598 ORTHO05D005550 1.6e-178 629.8 417 72.7
Gohir.D07G082500 Gossypium hirsutum HOM05D004598 ORTHO05D005550 3.6e-178 628.6 417 72.7
Atru.chr3.3248 Acer truncatum HOM05D004598 ORTHO05D005550 4.7e-178 628.2 427 71.2
Lalb_Chr01g0007411 Lupinus albus HOM05D004598 ORTHO05D005550 7.9e-178 627.5 426 71.4
Gohir.A07G077700 Gossypium hirsutum HOM05D004598 ORTHO05D005550 1.0e-177 627.1 417 72.4
Solyc02g083260.3 Solanum lycopersicum HOM05D004598 ORTHO05D005550 1.4e-177 626.7 430 70.2
Sabra01G0022600 Salix brachista HOM05D004598 ORTHO05D005550 1.8e-177 626.3 422 71.3
PGSC0003DMG400001580 Solanum tuberosum HOM05D004598 ORTHO05D005550 1.8e-177 626.3 430 70.0
COL.COLO4_05992 Corchorus olitorius HOM05D004598 ORTHO05D005550 2.3e-177 625.9 419 72.1
Cc07_g11450 Coffea canephora HOM05D004598 ORTHO05D005550 3.9e-177 625.2 423 70.7
Lj3g0020284 Lotus japonicus HOM05D004598 ORTHO05D005550 3.9e-177 625.2 422 70.6
CSS0010665 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 5.1e-177 624.8 430 70.9
vmacro20477 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 8.8e-177 624.0 429 70.6
PGR004G0790 Punica granatum HOM05D004598 ORTHO05D005550 1.1e-176 623.6 426 70.7
TPR.G8530 Trifolium pratense HOM05D004598 ORTHO05D005550 1.1e-176 623.6 426 71.1
Potri.001G031500 Populus trichocarpa HOM05D004598 ORTHO05D005550 1.5e-176 623.2 422 69.7
CAN.G890.18 Capsicum annuum HOM05D004598 ORTHO05D005550 7.4e-176 620.9 421 71.3
MBI19_g29897_MAGBIO Magnolia biondii HOM05D004598 ORTHO05D005550 1.3e-175 620.2 429 69.9
VMungo1080G1126 Vigna mungo HOM05D004598 ORTHO05D005550 1.3e-175 620.2 428 69.4
Duzib133G0026 Durio zibethinus HOM05D004598 ORTHO05D005550 2.8e-175 619.0 461 67.2
SalBow6G7131 Salvia bowleyana HOM05D004598 ORTHO05D005550 4.8e-175 618.2 430 68.4
Phvul.005G043300 Phaseolus vulgaris HOM05D004598 ORTHO05D005550 8.2e-175 617.5 431 68.4
TWI18G0003 Tripterygium wilfordii HOM05D004598 ORTHO05D005550 8.2e-175 617.5 419 70.9
Prupe.8G170900 Prunus persica HOM05D004598 ORTHO05D005550 1.1e-174 617.1 427 69.6
SalBow2G2153 Salvia bowleyana HOM05D004598 ORTHO05D005550 3.1e-174 615.5 430 67.9
AUR62026384 Chenopodium quinoa HOM05D004598 ORTHO05D005550 4.1e-174 615.1 379 77.6
BcaC03g13863 Brassica carinata HOM05D004598 ORTHO05D005550 9.1e-174 614.0 434 68.2
Thhalv10013575m.g Eutrema salsugineum HOM05D004598 ORTHO05D005550 1.5e-173 613.2 430 69.5
Aa31LG1G13300 Aethionema arabicum HOM05D004598 ORTHO05D005550 2.6e-173 612.5 428 68.2
FAN15G2177 Fragaria x ananassa HOM05D004598 ORTHO05D005550 4.5e-173 611.7 429 68.8
Medtr8g040610 Medicago truncatula HOM05D004598 ORTHO05D005550 5.9e-173 611.3 426 70.0
Sp6g23050 Schrenkiella parvula HOM05D004598 ORTHO05D005550 5.9e-173 611.3 430 68.8
FvH4_2g15820 Fragaria vesca HOM05D004598 ORTHO05D005550 7.7e-173 610.9 430 68.6
MD05G1127200 Malus domestica HOM05D004598 ORTHO05D005550 7.7e-173 610.9 430 68.8
MSTRG.2598 Avicennia marina HOM05D004598 ORTHO05D005550 1.3e-172 610.1 423 69.0
BcaB05g22747 Brassica carinata HOM05D004598 ORTHO05D005550 1.7e-172 609.8 426 69.7
BraA02t05641Z Brassica rapa HOM05D004598 ORTHO05D005550 1.7e-172 609.8 426 69.5
FAN27G3211 Fragaria x ananassa HOM05D004598 ORTHO05D005550 1.7e-172 609.8 429 68.5
THA.LOC104799567 Tarenaya hassleriana HOM05D004598 ORTHO05D005550 2.2e-172 609.4 428 68.7
TAR624G0541 Trochodendron aralioides HOM05D004598 ORTHO05D005550 2.9e-172 609.0 420 70.2
BolC2t07140H Brassica oleracea HOM05D004598 ORTHO05D005550 8.5e-172 607.4 426 69.7
RcHm_v2.0_Chr6g0279191 Rosa chinensis HOM05D004598 ORTHO05D005550 8.5e-172 607.4 429 67.8
Aqoxy3G01523 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 1.1e-171 607.1 418 69.4
MBI02_g31690_MAGBIO Magnolia biondii HOM05D004598 ORTHO05D005550 1.4e-171 606.7 427 68.1
Nitab4.5_0004259g0040 Nicotiana tabacum HOM05D004598 ORTHO05D005550 1.4e-171 606.7 495 61.4
C02p10690 Brassica napus HOM05D004598 ORTHO05D005550 3.2e-171 605.5 431 68.4
Carub.0006s1977 Capsella rubella HOM05D004598 ORTHO05D005550 3.2e-171 605.5 428 68.7
Aqoxy3G01530 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 5.5e-171 604.7 418 69.1
CARHR191400 Cardamine hirsuta HOM05D004598 ORTHO05D005550 5.5e-171 604.7 429 68.1
Aqoxy6G02901 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 9.4e-171 604.0 418 69.4
Glyma.08G159600 Glycine max HOM05D004598 ORTHO05D005550 1.4e-169 600.1 426 68.3
AL6G33110 Arabidopsis lyrata HOM05D004598 ORTHO05D005550 3.9e-169 598.6 427 68.6
HanXRQChr14g0454151 Helianthus annuus HOM05D004598 ORTHO05D005550 6.7e-169 597.8 400 70.5
GSVIVG01017167001 Vitis vinifera HOM05D004598 ORTHO05D005550 2.6e-168 595.9 399 72.7
Eucgr.H00040 Eucalyptus grandis HOM05D004598 ORTHO05D005550 3.3e-168 595.5 427 68.1
Cpa.g.sc9.382 Carica papaya HOM05D004598 ORTHO05D005550 4.4e-168 595.1 452 65.3
AT5G22130 Arabidopsis thaliana HOM05D004598 ORTHO05D005550 7.4e-168 594.3 445 66.1
Migut.H02299 Erythranthe guttata HOM05D004598 ORTHO05D005550 2.2e-167 592.8 422 67.8
CsaV3_7G001350 Cucumis sativus L. HOM05D004598 ORTHO05D005550 1.6e-165 586.6 419 68.5
MELO3C013319.2 Cucumis melo HOM05D004598 ORTHO05D005550 4.5e-165 585.1 434 66.8
PSO675G4488 Papaver somniferum HOM05D004598 ORTHO05D005550 5.9e-165 584.7 475 62.5
Ciclev10001079m.g Citrus clementina HOM05D004598 ORTHO05D005550 2.5e-163 579.3 421 66.7
Rhsim11G0148800 Rhododendron simsii HOM05D004598 ORTHO05D005550 9.4e-163 577.4 428 66.8
ClCG02G003800 Citrullus lanatus HOM05D004598 ORTHO05D005550 2.3e-161 572.8 429 66.7
Haze_02994 Corylus avellana HOM05D006110 ORTHO05D007774 2.8e-159 565.8 428 66.4
ATR0165G018 Amborella trichopoda HOM05D004598 ORTHO05D005550 3.7e-159 565.5 441 63.7
EL10Ac6g13343 Beta vulgaris HOM05D004598 ORTHO05D005550 1.2e-157 560.5 426 66.9
Dinv08542 Davidia involucrata HOM05D004598 ORTHO05D005550 5.0e-156 555.1 396 68.7
Medtr1g058230 Medicago truncatula HOM05D004598 ORTHO05D005550 2.3e-153 546.2 420 65.7
QL11p052661 Quercus lobata HOM05D004598 ORTHO05D005550 5.7e-152 541.6 446 60.1
Aqoxy3G00619 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 9.8e-152 540.8 418 64.4
BcaC07g41302 Brassica carinata HOM05D004598 ORTHO05D005550 8.3e-151 537.7 405 65.7
BolC8t51865H Brassica oleracea HOM05D004598 ORTHO05D005550 2.4e-150 536.2 417 64.5
HPP92_002259 Vanilla planifolia HOM05D004598 ORTHO05D005550 1.7e-143 513.5 385 64.9
TPR.G6064 Trifolium pratense HOM05D004598 ORTHO05D005550 9.2e-142 507.7 426 61.5
Hma1.2p1_0315F.1_g122690 Hydrangea macrophylla HOM05D004598 ORTHO05D005550 5.6e-139 498.4 336 72.3
Oeu046543.3 Olea europaea HOM05D004598 ORTHO05D005550 4.7e-138 495.4 396 63.6
Cfa010950 Carpinus fangiana HOM05D006110 ORTHO05D007774 8.9e-137 491.1 331 73.7
Nitab4.5_0001696g0090 Nicotiana tabacum HOM05D004598 ORTHO05D005550 3.7e-135 485.7 416 60.1
Os03g0670200 Oryza sativa ssp. japonica HOM05D004598 ORTHO05D005550 1.4e-134 483.8 423 57.0
SEGI_01084 Sequoiadendron giganteum HOM05D004598 ORTHO05D005550 3.9e-132 475.7 373 62.7
Mapoly0079s0001 Marchantia polymorpha HOM05D004598 ORTHO05D005550 8.6e-132 474.6 417 56.4
arahy.Tifrunner.gnm1.ann1.B5R5MF Arachis hypogaea HOM05D004598 ORTHO05D005550 3.1e-129 466.1 331 68.3
arahy.Tifrunner.gnm1.ann1.K5F1ZR Arachis hypogaea HOM05D004598 ORTHO05D005550 1.5e-128 463.8 329 68.4
AagrBONN_evm.TU.Sc2ySwM_368.2499 Anthoceros agrestis HOM05D004598 ORTHO05D005550 3.4e-128 462.6 414 57.0
CDE02G1977 Ceratophyllum demersum HOM05D004598 ORTHO05D005550 8.3e-127 458.0 366 61.5
Sed0007699 Sechium edule HOM05D004598 ORTHO05D005550 3.2e-126 456.1 340 67.1
SGA_v2.0_scaffold195G40853 Striga asiatica HOM05D004598 ORTHO05D003143 1.2e-125 454.1 330 65.5
Pp3c1_29840 Physcomitrium patens HOM05D004598 ORTHO05D005550 6.6e-124 448.4 416 54.3
arahy.Tifrunner.gnm1.ann1.PEW2A9 Arachis hypogaea HOM05D004598 ORTHO05D005550 1.4e-121 440.7 338 64.5
Lj2A487T63 Lonicera japonica HOM05D004598 ORTHO05D005550 3.1e-121 439.5 440 53.2
SMO118G0414 Selaginella moellendorffii HOM05D004598 ORTHO05D005550 2.1e-117 426.8 412 53.9
Migut.H02295 Erythranthe guttata HOM05D004598 ORTHO05D005550 4.6e-109 399.1 332 61.1
DCAR_027631 Daucus carota HOM05D004598 ORTHO05D005550 7.8e-109 398.3 312 63.5
vmacro22733 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 1.7e-108 397.1 426 50.5
CBR_g41686 Chara braunii HOM05D004598 ORTHO05D005550 3.4e-104 382.9 576 38.7
C08p43090 Brassica napus HOM05D004598 ORTHO05D005550 9.3e-102 374.8 281 65.1
Migut.H02297 Erythranthe guttata HOM05D004598 ORTHO05D005550 2.4e-97 360.1 272 64.3
Gohir.A11G320400 Gossypium hirsutum HOM05D004598 ORTHO05D005550 3.4e-96 356.3 370 53.5
Manes.07G140750 Manihot esculenta HOM05D004598 ORTHO05D005550 2.7e-93 346.7 278 63.3
arahy.Tifrunner.gnm1.ann1.BN9D0T Arachis hypogaea HOM05D004598 ORTHO05D005550 5.6e-91 339.0 418 46.7
unitig_736.g22586 Utricularia gibba HOM05D004598 ORTHO05D005550 1.4e-89 334.3 270 60.4
CSS0036727 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 3.1e-89 333.2 248 67.3
Lsat_1_v5_gn_9_118221 Lactuca sativa HOM05D004598 ORTHO05D005550 6.2e-82 308.9 417 41.7
Actinidia00342 Actinidia chinensis HOM05D004598 ORTHO05D005550 1.4e-81 307.8 347 49.3
Thhalv10015361m.g Eutrema salsugineum HOM05D004598 ORTHO05D005550 6.9e-81 305.4 233 64.8
FAN20G2148 Fragaria x ananassa HOM05D004598 ORTHO05D005550 1.2e-80 304.7 425 39.8
ECA240G3480 Erigeron canadensis HOM05D004598 ORTHO05D005550 2.2e-79 300.4 206 68.0
SHI34561 Sapria himalayana HOM05D004598 ORTHO05D005550 3.9e-76 289.7 421 40.9
SGA_v2.0_scaffold108G30913 Striga asiatica HOM05D004598 ORTHO05D005550 1.9e-75 287.3 401 43.1
Cre14.g616200 Chlamydomonas reinhardtii HOM05D004598 ORTHO05D005550 7.9e-69 265.4 471 36.9
Zm00001eb096280 Zea mays HOM05D004598 ORTHO05D005550 4.3e-67 259.6 218 59.2
MD10G1130600 Malus domestica HOM05D004598 ORTHO05D005550 4.1e-65 253.1 230 53.0
Nn2g12459 Nelumbo nucifera HOM05D004598 ORTHO05D005550 5.3e-65 252.7 177 68.4
CSS0012948 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 2.2e-63 247.3 149 76.5
MCO01G023 Micromonas commoda HOM05D004598 ORTHO05D005550 2.2e-63 247.3 412 39.1
Rhsim11G0028900 Rhododendron simsii HOM05D004598 ORTHO05D005550 2.3e-60 237.3 359 40.4
BNapus_Darmor_BZH_scaffold_38p00840 Brassica napus HOM05D004598 ORTHO05D005550 8.8e-60 235.3 148 74.3
Psat6g012400 Pisum sativum HOM05D004598 ORTHO05D005550 1.3e-58 231.5 167 67.7
Cfa027243 Carpinus fangiana HOM05D004598 ORTHO05D005550 1.5e-54 218.0 416 34.9
FAN24G1674 Fragaria x ananassa HOM05D004598 ORTHO05D005550 2.5e-54 217.2 200 55.5
MD10G1130700 Malus domestica HOM05D004598 ORTHO05D005550 4.7e-53 213.0 137 71.5
vmacro01928 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 3.0e-52 210.3 140 72.1
TAR160G0002 Trochodendron aralioides HOM05D004598 ORTHO05D005550 1.5e-51 208.0 181 61.3
BolC9t58552H Brassica oleracea HOM05D004598 ORTHO05D005550 4.8e-50 203.0 257 47.5
Dinv26897 Davidia involucrata HOM05D004598 ORTHO05D005550 2.1e-45 187.6 116 75.9
Lj2E933T1 Lonicera japonica HOM05D004598 ORTHO05D005550 8.8e-44 182.2 111 76.6
BcaB01g04740 Brassica carinata HOM05D004598 ORTHO05D005550 4.5e-32 143.3 124 64.5
PRCOL_00005536 Prasinoderma coloniale HOM05D004598 ORTHO05D005550 2.6e-27 127.5 423 27.4
vmacro20475 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 2.6e-27 127.5 89 67.4
vmacro22736 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 2.6e-27 127.5 89 67.4
MELO3C010621.2 Cucumis melo HOM05D004598 ORTHO05D005550 2.7e-24 117.5 93 59.1
Rhsim09G0084000 Rhododendron simsii HOM05D004598 ORTHO05D005550 6.8e-20 102.8 61 77.0
SHI43372 Sapria himalayana HOM05D004598 ORTHO05D005550 4.6e-16 90.1 329 26.7
SHI44717 Sapria himalayana HOM05D004598 ORTHO05D005550 7.3e-14 82.8 109 49.5
CAN.G890.17 Capsicum annuum HOM05D004598 ORTHO05D005550 2.8e-13 80.9 76 55.3
Medtr6g051670 Medicago truncatula HOM05D004598 ORTHO05D005550 9.8e-11 72.4 48 62.5
SHI53813 Sapria himalayana HOM05D004598 ORTHO05D005550 2.2e-10 71.2 51 62.7
SHI39037 Sapria himalayana HOM05D004598 ORTHO05D005550 2.9e-10 70.9 51 62.7
SHI53927 Sapria himalayana HOM05D004598 ORTHO05D005550 2.9e-10 70.9 51 62.7
SHI39035 Sapria himalayana HOM05D004598 ORTHO05D005550 1.3e-07 62.0 51 54.9
SHI47796 Sapria himalayana HOM05D004598 ORTHO05D005550 6.6e-07 59.7 55 47.3
SHI41529 Sapria himalayana HOM05D004598 ORTHO05D005550 8.6e-07 59.3 51 56.9


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