Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0001500 Simmondsia chinensis HOM05D006676 ORTHO05D008394 1.5e-282 975.7 559 100.0
Dinv26772 Davidia involucrata HOM05D006676 ORTHO05D008394 4.7e-42 176.8 182 54.9
Hma1.2p1_0261F.1_g105020 Hydrangea macrophylla HOM05D006676 ORTHO05D008394 4.8e-39 166.8 186 52.7
MSTRG.15406 Avicennia marina HOM05D006676 ORTHO05D008394 6.3e-39 166.4 178 53.4
EL10Ac6g14836 Beta vulgaris HOM05D006676 ORTHO05D008394 6.3e-39 166.4 180 60.0
Prupe.7G145000 Prunus persica HOM05D006676 ORTHO05D008394 1.8e-38 164.9 181 55.2
MD02G1159200 Malus domestica HOM05D006676 ORTHO05D008394 1.6e-37 161.8 181 51.9
Manes.13G131900 Manihot esculenta HOM05D006676 ORTHO05D008394 2.0e-37 161.4 177 53.1
Hund14112 Selenicereus undatus HOM05D006676 ORTHO05D008394 2.6e-37 161.0 180 56.1
CANSAT01G0168 Cannabis sativa HOM05D006676 ORTHO05D008394 3.5e-37 160.6 187 54.5
Gorai.003G019600 Gossypium raimondii HOM05D006676 ORTHO05D008394 4.5e-37 160.2 184 51.6
Nn6g32155 Nelumbo nucifera HOM05D006676 ORTHO05D008394 5.9e-37 159.8 180 53.9
Gohir.A02G161300 Gossypium hirsutum HOM05D006676 ORTHO05D008394 7.7e-37 159.5 184 51.1
Duzib187G2000 Durio zibethinus HOM05D006676 ORTHO05D008394 2.2e-36 157.9 184 51.6
QL06p044204 Quercus lobata HOM05D006676 ORTHO05D008394 2.9e-36 157.5 179 53.1
PGR102G2956 Punica granatum HOM05D006676 ORTHO05D008394 5.0e-36 156.8 182 53.8
Gohir.D03G019200 Gossypium hirsutum HOM05D006676 ORTHO05D008394 8.5e-36 156.0 184 51.1
Thecc.01G046000 Theobroma cacao HOM05D006676 ORTHO05D008394 1.9e-35 154.8 184 48.4
Ciclev10026596m.g Citrus clementina HOM05D006676 ORTHO05D008394 2.5e-35 154.5 185 54.6
PSO675G6281 Papaver somniferum HOM05D006676 ORTHO05D008394 3.2e-35 154.1 177 51.4
RcHm_v2.0_Chr2g0103301 Rosa chinensis HOM05D006676 ORTHO05D008394 4.2e-35 153.7 182 53.8
TWI09G1529 Tripterygium wilfordii HOM05D006676 ORTHO05D008394 5.5e-35 153.3 177 51.4
PSO541G6387 Papaver somniferum HOM05D006676 ORTHO05D008394 1.6e-34 151.8 177 54.8
FvH4_1g14550 Fragaria vesca HOM05D006676 ORTHO05D008394 4.7e-34 150.2 181 52.5
FAN23G1040 Fragaria x ananassa HOM05D006676 ORTHO05D008394 4.7e-34 150.2 183 51.4
FAN19G1679 Fragaria x ananassa HOM05D006676 ORTHO05D008394 6.1e-34 149.8 181 52.5
Actinidia36526 Actinidia chinensis HOM05D006676 ORTHO05D008394 8.0e-34 149.4 185 51.4
arahy.Tifrunner.gnm1.ann1.TQQ6DV Arachis hypogaea HOM05D006676 ORTHO05D008394 8.0e-34 149.4 184 47.8
CiPaw.01G028300 Carya illinoinensis HOM05D006676 ORTHO05D008394 8.0e-34 149.4 184 49.5
COL.COLO4_22185 Corchorus olitorius HOM05D006676 ORTHO05D008394 8.0e-34 149.4 185 48.6
MD00G1067500 Malus domestica HOM05D006676 ORTHO05D008394 1.4e-33 148.7 183 49.2
Lj2g0022488 Lotus japonicus HOM05D006676 ORTHO05D008394 1.8e-33 148.3 183 49.2
ECA232G0167 Erigeron canadensis HOM05D006676 ORTHO05D008394 2.3e-33 147.9 182 50.5
TAR625G0739 Trochodendron aralioides HOM05D006676 ORTHO05D008394 3.0e-33 147.5 180 51.1
Actinidia12084 Actinidia chinensis HOM05D006676 ORTHO05D008394 5.2e-33 146.7 185 51.4
Aqoxy6G00953 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 5.2e-33 146.7 177 54.2
Eucgr.H01944 Eucalyptus grandis HOM05D006676 ORTHO05D008394 5.2e-33 146.7 183 48.6
Sopen02g015580 Solanum pennellii HOM05D006676 ORTHO05D008394 5.2e-33 146.7 183 47.5
Phvul.002G023300 Phaseolus vulgaris HOM05D006676 ORTHO05D008394 8.8e-33 146.0 182 46.7
Glyma.01G182300 Glycine max HOM05D006676 ORTHO05D008394 1.2e-32 145.6 181 47.0
Lalb_Chr05g0213091 Lupinus albus HOM05D006676 ORTHO05D008394 1.2e-32 145.6 185 46.5
HanXRQChr15g0489591 Helianthus annuus HOM05D006676 ORTHO05D008394 2.0e-32 144.8 182 54.9
Glyma.11G060600 Glycine max HOM05D006676 ORTHO05D008394 2.6e-32 144.4 181 46.4
Lj7A15T51 Lonicera japonica HOM05D006676 ORTHO05D008394 3.4e-32 144.1 183 50.8
Sabra07G0030200 Salix brachista HOM05D001814 ORTHO05D001845 3.4e-32 144.1 193 47.7
FAN26G0249 Fragaria x ananassa HOM05D006676 ORTHO05D008394 7.5e-32 142.9 182 54.4
arahy.Tifrunner.gnm1.ann1.A5DXZZ Arachis hypogaea HOM05D006676 ORTHO05D008394 9.8e-32 142.5 188 47.9
Sed0003061 Sechium edule HOM05D006676 ORTHO05D008394 9.8e-32 142.5 181 50.3
arahy.Tifrunner.gnm1.ann1.MI0500 Arachis hypogaea HOM05D006676 ORTHO05D008394 1.3e-31 142.1 186 50.5
VMungo1215G3052 Vigna mungo HOM05D006676 ORTHO05D008394 1.4e-30 138.7 178 44.9
ClCG02G013070 Citrullus lanatus HOM05D006676 ORTHO05D008394 1.8e-30 138.3 183 48.1
Potri.007G034600 Populus trichocarpa HOM05D006676 ORTHO05D008394 2.4e-30 137.9 178 47.8
CDE02G4077 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 3.1e-30 137.5 178 47.2
AUR62027231 Chenopodium quinoa HOM05D006676 ORTHO05D008394 3.1e-30 137.5 182 49.5
CsaV3_2G017150 Cucumis sativus L. HOM05D006676 ORTHO05D008394 3.1e-30 137.5 182 48.9
FAN28G2791 Fragaria x ananassa HOM05D006676 ORTHO05D008394 3.1e-30 137.5 175 54.3
Sc16g0001490 Simmondsia chinensis HOM05D006676 ORTHO05D008394 9.1e-30 136.0 82 92.7
Cc07_g05420 Coffea canephora HOM05D006676 ORTHO05D008394 3.5e-29 134.0 193 49.2
Psat2g163920 Pisum sativum HOM05D006676 ORTHO05D008394 5.9e-29 133.3 188 44.7
Cpa.g.sc15.74 Carica papaya HOM05D006676 ORTHO05D008394 1.3e-28 132.1 144 56.2
Oeu032926.1 Olea europaea HOM05D006676 ORTHO05D008394 2.9e-28 131.0 189 47.1
Ca_24806_v3 Cicer arietinum L. HOM05D006676 ORTHO05D008394 1.1e-27 129.0 183 43.7
MELO3C020918.2 Cucumis melo HOM05D006676 ORTHO05D008394 1.1e-27 129.0 183 47.0
Solyc02g065370.3 Solanum lycopersicum HOM05D006676 ORTHO05D008394 1.5e-27 128.6 183 47.5
Dinv39914 Davidia involucrata HOM05D006676 ORTHO05D008394 9.4e-27 125.9 94 71.3
Duzib147G0589 Durio zibethinus HOM05D006676 ORTHO05D008394 1.2e-26 125.6 176 44.9
Cfa004230 Carpinus fangiana HOM05D006676 ORTHO05D008394 1.6e-26 125.2 149 49.7
Rhsim08G0109100 Rhododendron simsii HOM05D006676 ORTHO05D008394 8.0e-26 122.9 148 55.4
AUR62003241 Chenopodium quinoa HOM05D006676 ORTHO05D008394 1.4e-25 122.1 182 48.4
Os02g0186700 Oryza sativa ssp. japonica HOM05D006676 ORTHO05D008394 2.3e-25 121.3 207 37.2
Migut.K00838 Erythranthe guttata HOM05D006676 ORTHO05D008394 3.0e-25 120.9 184 45.7
Ah.02g126080 Amaranthus hybridus HOM05D006676 ORTHO05D008394 5.2e-25 120.2 149 56.4
Zm00001eb206480 Zea mays HOM05D006676 ORTHO05D008394 5.2e-25 120.2 179 41.3
Nitab4.5_0002126g0070 Nicotiana tabacum HOM05D006676 ORTHO05D008394 8.8e-25 119.4 183 45.9
Nitab4.5_0000090g0080 Nicotiana tabacum HOM05D006676 ORTHO05D008394 3.4e-24 117.5 183 44.3
TPR.G29856 Trifolium pratense HOM05D006676 ORTHO05D008394 4.4e-24 117.1 193 43.0
HPP92_004789 Vanilla planifolia HOM05D006676 ORTHO05D008394 1.3e-23 115.5 221 38.5
MBI04_g03667_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 2.8e-23 114.4 159 47.2
CAN.G93.2 Capsicum annuum HOM05D006676 ORTHO05D008394 8.3e-23 112.8 183 43.2
PGSC0003DMG400002746 Solanum tuberosum HOM05D006676 ORTHO05D008394 1.4e-22 112.1 183 44.3
DCAR_025672 Daucus carota HOM05D006676 ORTHO05D008394 1.8e-22 111.7 145 48.3
unitig_749.g13556 Utricularia gibba HOM05D006676 ORTHO05D008394 7.0e-22 109.8 168 43.5
SGA_v2.0_scaffold175G39367 Striga asiatica HOM05D006676 ORTHO05D008394 9.1e-22 109.4 145 47.6
Medtr5g018550 Medicago truncatula HOM05D006676 ORTHO05D008394 1.2e-21 109.0 183 39.9
Sp7g34680 Schrenkiella parvula HOM05D006676 ORTHO05D008394 8.6e-20 102.8 183 39.9
SGA_v2.0_scaffold1G00184 Striga asiatica HOM05D006676 ORTHO05D008394 1.5e-19 102.1 131 48.9
BraA01t00181Z Brassica rapa HOM05D006676 ORTHO05D008394 3.3e-19 100.9 179 37.4
Carub.0007s0328 Capsella rubella HOM05D006676 ORTHO05D008394 2.8e-18 97.8 187 39.0
AT4G37090 Arabidopsis thaliana HOM05D006676 ORTHO05D008394 3.6e-18 97.4 184 38.6
AL7G13870 Arabidopsis lyrata HOM05D006676 ORTHO05D008394 1.0e-17 95.9 184 38.0
BcaC01g00433 Brassica carinata HOM05D006676 ORTHO05D008394 1.8e-17 95.1 175 42.3
C03p79700 Brassica napus HOM05D006676 ORTHO05D008394 1.8e-17 95.1 175 42.3
CARHR245420 Cardamine hirsuta HOM05D006676 ORTHO05D008394 2.3e-17 94.7 184 37.0
GSVIVG01005096001 Vitis vinifera HOM05D006676 ORTHO05D008394 2.3e-17 94.7 94 61.7
GSVIVG01004606001 Vitis vinifera HOM05D006676 ORTHO05D008394 3.0e-17 94.4 94 60.6
BcaNung03502 Brassica carinata HOM05D006676 ORTHO05D008394 5.2e-17 93.6 175 36.6
Thhalv10026327m.g Eutrema salsugineum HOM05D006676 ORTHO05D008394 5.2e-17 93.6 176 38.1
vmacro17885 Vaccinium macrocarpon HOM05D006676 ORTHO05D008394 8.9e-17 92.8 233 33.5
A01p01920 Brassica napus HOM05D006676 ORTHO05D008394 1.5e-16 92.0 179 35.8
C01p02080 Brassica napus HOM05D006676 ORTHO05D008394 2.0e-16 91.7 175 36.6
BolC1t00200H Brassica oleracea HOM05D006676 ORTHO05D008394 2.0e-16 91.7 175 36.6
Aqoxy2G03321 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 4.4e-16 90.5 138 51.4
Aqoxy6G00951 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 4.4e-16 90.5 138 51.4
BolC3t20221H Brassica oleracea HOM05D006676 ORTHO05D008394 2.2e-15 88.2 175 40.6
Peaxi162Scf00019g02117 Petunia axillaris HOM05D006676 ORTHO05D008394 2.9e-15 87.8 158 43.7
Sc16g0001480 Simmondsia chinensis HOM05D006676 ORTHO05D008394 1.1e-14 85.9 50 90.0
Aa31LG6G13890 Aethionema arabicum HOM05D006676 ORTHO05D008394 4.1e-14 84.0 176 37.5
BraA08t34206Z Brassica rapa HOM05D006676 ORTHO05D008394 1.0e-12 79.3 175 35.4
CDE01G0251 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 3.9e-12 77.4 71 57.7
MBI15_g03557_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 6.6e-12 76.6 82 54.9
A08p22510 Brassica napus HOM05D006676 ORTHO05D008394 4.3e-11 73.9 175 36.6
THA.LOC104819832 Tarenaya hassleriana HOM05D006676 ORTHO05D008394 5.8e-08 63.5 184 38.0
ATR0800G049 Amborella trichopoda HOM05D006676 ORTHO05D008394 1.3e-07 62.4 80 46.2
Sc14g0004950 Simmondsia chinensis HOM05D003426 ORTHO05D030610 2.2e-07 61.6 46 69.6
BcaB03g12363 Brassica carinata HOM05D006676 ORTHO05D008394 8.3e-07 59.7 57 49.1
Sc14g0000930 Simmondsia chinensis HOM05D003426 ORTHO05D003816 1.9e-06 58.5 65 56.9
arahy.Tifrunner.gnm1.ann1.9JJG5X Arachis hypogaea HOM05D006676 ORTHO05D008394 5.4e-06 57.0 136 38.2
BcaB03g12365 Brassica carinata HOM05D006676 ORTHO05D008394 7.0e-06 56.6 54 48.1


User provided reference genes

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