Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0001280 Simmondsia chinensis HOM05D032452 ORTHO05D012434 3.0e-176 621.7 306 100.0
Sc16g0001290 Simmondsia chinensis HOM05D032452 ORTHO05D012434 3.0e-176 621.7 306 100.0
Sc16g0001260 Simmondsia chinensis HOM05D032452 ORTHO05D012434 9.8e-18 95.1 170 41.2
Sc16g0001100 Simmondsia chinensis HOM05D038590 ORTHO05D012434 8.0e-12 75.5 145 35.9
BraA10t42486Z Brassica rapa HOM05D000264 ORTHO05D000152 3.0e-11 73.6 140 32.1
A10p02160 Brassica napus HOM05D000264 ORTHO05D000152 4.0e-11 73.2 140 32.1
Sc16g0001310 Simmondsia chinensis HOM05D038590 ORTHO05D012434 5.2e-11 72.8 145 35.2
BcaC05g24511 Brassica carinata HOM05D000264 ORTHO05D000152 1.2e-10 71.6 140 30.7
C05p02120 Brassica napus HOM05D000264 ORTHO05D000152 1.2e-10 71.6 140 30.7
BolC5t28989H Brassica oleracea HOM05D000264 ORTHO05D000152 1.2e-10 71.6 140 30.7
BcaB02g06911 Brassica carinata HOM05D000264 ORTHO05D000152 3.4e-10 70.1 140 31.4
Hund16575 Selenicereus undatus HOM05D000264 ORTHO05D000152 1.3e-09 68.2 137 32.8
CARHR100500 Cardamine hirsuta HOM05D000264 ORTHO05D000152 1.7e-09 67.8 128 32.8
Eucgr.K00461 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.8e-08 64.3 99 35.4
Eucgr.K00462 Eucalyptus grandis HOM05D000264 ORTHO05D000152 7.0e-08 62.4 86 38.4
AT4G03440 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 2.0e-07 60.8 117 31.6
Rhsim06G0145300 Rhododendron simsii HOM05D000264 ORTHO05D000152 2.0e-07 60.8 104 33.7
Eucgr.K00471 Eucalyptus grandis HOM05D000264 ORTHO05D000152 3.5e-07 60.1 79 38.0
Carub.0006s3357 Capsella rubella HOM05D000264 ORTHO05D000152 7.8e-07 58.9 116 31.9
Eucgr.E02709 Eucalyptus grandis HOM05D000264 ORTHO05D000152 7.8e-07 58.9 107 31.8
Eucgr.K00050 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.3e-06 58.2 97 34.0
Eucgr.K00468 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.3e-06 58.2 100 36.0
Ah.01g022540 Amaranthus hybridus HOM05D000264 ORTHO05D000152 1.7e-06 57.8 120 34.2
Ah.01g022500 Amaranthus hybridus HOM05D000264 ORTHO05D000152 5.0e-06 56.2 120 31.7
AT1G03670 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 6.6e-06 55.8 132 28.8
Phvul.005G046400 Phaseolus vulgaris HOM05D000264 ORTHO05D000152 6.6e-06 55.8 94 31.9
Sabra11G0081400 Salix brachista HOM05D000264 ORTHO05D000152 8.6e-06 55.5 123 31.7


User provided reference genes

Program Settings