Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0000290 Simmondsia chinensis HOM05D000723 ORTHO05D387447 2.0e-49 198.7 96 100.0
Potri.007G097300 Populus trichocarpa HOM05D000723 ORTHO05D001760 2.2e-08 62.4 94 38.3
RcHm_v2.0_Chr2g0112291 Rosa chinensis HOM05D000723 ORTHO05D001760 3.8e-08 61.6 99 38.4
FvH4_1g20220 Fragaria vesca HOM05D000723 ORTHO05D001760 6.4e-08 60.8 99 37.4
Cpa.g.sc55.69 Carica papaya HOM05D000723 ORTHO05D001760 8.4e-08 60.5 117 32.5
Duzib248G1074 Durio zibethinus HOM05D000723 ORTHO05D001760 8.4e-08 60.5 110 35.5
Ciclev10028107m.g Citrus clementina HOM05D000723 ORTHO05D001760 1.1e-07 60.1 115 34.8
FAN28G1329 Fragaria x ananassa HOM05D000723 ORTHO05D001760 1.4e-07 59.7 99 38.4
CSS0005330 Camellia sinensis var. sinensis HOM05D000723 ORTHO05D001760 1.9e-07 59.3 114 37.7
Actinidia01861 Actinidia chinensis HOM05D000723 ORTHO05D001760 3.2e-07 58.5 115 34.8
Actinidia06537 Actinidia chinensis HOM05D000723 ORTHO05D001760 3.2e-07 58.5 116 31.9
arahy.Tifrunner.gnm1.ann1.J66FTP Arachis hypogaea HOM05D000723 ORTHO05D001760 3.2e-07 58.5 112 32.1
Cfa005680 Carpinus fangiana HOM05D000723 ORTHO05D001760 4.2e-07 58.2 115 34.8
Glyma.05G175500 Glycine max HOM05D000723 ORTHO05D001760 4.2e-07 58.2 116 36.2
arahy.Tifrunner.gnm1.ann1.W47UXZ Arachis hypogaea HOM05D000723 ORTHO05D001760 7.1e-07 57.4 111 31.5
Thecc.02G133600 Theobroma cacao HOM05D000723 ORTHO05D001760 7.1e-07 57.4 99 34.3
TAR628G1235 Trochodendron aralioides HOM05D000723 ORTHO05D001760 7.1e-07 57.4 118 34.7
Glyma.08G132700 Glycine max HOM05D000723 ORTHO05D001760 9.3e-07 57.0 119 34.5
PGSC0003DMG400012571 Solanum tuberosum HOM05D000723 ORTHO05D001760 9.3e-07 57.0 45 55.6
Haze_10570 Corylus avellana HOM05D000723 ORTHO05D001760 1.2e-06 56.6 115 33.9
FAN23G1195 Fragaria x ananassa HOM05D000723 ORTHO05D001760 1.2e-06 56.6 99 35.4
Sabra07G0080500 Salix brachista HOM05D000723 ORTHO05D001760 1.2e-06 56.6 92 35.9
Hund06368 Selenicereus undatus HOM05D000723 ORTHO05D001760 1.2e-06 56.6 108 36.1
Aqoxy6G00710 Aquilegia oxysepala HOM05D000723 ORTHO05D001760 1.6e-06 56.2 117 34.2
CiPaw.06G155800 Carya illinoinensis HOM05D000723 ORTHO05D001760 1.6e-06 56.2 114 35.1
Dinv24168 Davidia involucrata HOM05D000723 ORTHO05D001760 1.6e-06 56.2 95 35.8
Duzib147G1011 Durio zibethinus HOM05D000723 ORTHO05D001760 1.6e-06 56.2 112 35.7
Sabra05G0058600 Salix brachista HOM05D000723 ORTHO05D001760 1.6e-06 56.2 107 30.8
Ah.01g017520 Amaranthus hybridus HOM05D000723 ORTHO05D001760 2.1e-06 55.8 101 35.6
CAN.G3185.1 Capsicum annuum HOM05D000723 ORTHO05D001760 2.1e-06 55.8 45 53.3
CAN.G523.39 Capsicum annuum HOM05D000723 ORTHO05D001760 2.1e-06 55.8 45 53.3
Ca_00148_v3 Cicer arietinum L. HOM05D000723 ORTHO05D001760 2.7e-06 55.5 103 34.0
Peaxi162Scf00299g01141 Petunia axillaris HOM05D000723 ORTHO05D001760 3.5e-06 55.1 45 53.3
Manes.07G035400 Manihot esculenta HOM05D000723 ORTHO05D001760 4.6e-06 54.7 45 53.3
Dinv09004 Davidia involucrata HOM05D000723 ORTHO05D001760 6.0e-06 54.3 54 46.3
Hma1.2p1_0784F.1_g217200 Hydrangea macrophylla HOM05D000723 ORTHO05D001760 6.0e-06 54.3 115 34.8
MBI06_g22314_MAGBIO Magnolia biondii HOM05D000723 ORTHO05D001760 6.0e-06 54.3 68 39.7
Sc08g0003680 Simmondsia chinensis HOM05D000723 ORTHO05D001760 6.0e-06 54.3 95 35.8
VMungo0251G3098 Vigna mungo HOM05D000723 ORTHO05D001760 6.0e-06 54.3 119 32.8
VMungo0251G1338 Vigna mungo HOM05D000723 ORTHO05D001760 7.8e-06 53.9 60 41.7


User provided reference genes

Program Settings