Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc15g0005560 Simmondsia chinensis HOM05D005988 ORTHO05D007392 3.8e-102 374.8 183 100.0
Sc15g0005760 Simmondsia chinensis HOM05D005988 ORTHO05D007392 3.5e-47 192.2 91 100.0
Hund13388 Selenicereus undatus HOM05D005988 ORTHO05D007392 6.4e-41 171.4 88 89.8
EL10Ac2g02768 Beta vulgaris HOM05D005988 ORTHO05D007392 2.7e-39 166.0 86 88.4
AUR62034347 Chenopodium quinoa HOM05D005988 ORTHO05D007392 1.0e-38 164.1 87 86.2
AUR62022358 Chenopodium quinoa HOM05D005988 ORTHO05D007392 1.5e-37 160.2 86 84.9
Duzib251G0426 Durio zibethinus HOM05D005988 ORTHO05D007392 1.9e-37 159.8 86 84.9
PSO017G5437 Papaver somniferum HOM05D005988 ORTHO05D007392 1.9e-37 159.8 87 79.3
Duzib251G0424 Durio zibethinus HOM05D005988 ORTHO05D007392 2.5e-37 159.5 86 83.7
Manes.13G012300 Manihot esculenta HOM05D005988 ORTHO05D007392 2.5e-37 159.5 86 82.6
Thecc.02G210500 Theobroma cacao HOM05D005988 ORTHO05D007392 3.3e-37 159.1 93 80.6
Ah.10g030080 Amaranthus hybridus HOM05D005988 ORTHO05D007392 4.3e-37 158.7 81 90.1
PGR102G1123 Punica granatum HOM05D005988 ORTHO05D007392 4.3e-37 158.7 85 83.5
Rhsim04G0162300 Rhododendron simsii HOM05D005988 ORTHO05D007392 7.3e-37 157.9 88 78.4
Manes.12G011400 Manihot esculenta HOM05D005988 ORTHO05D007392 2.1e-36 156.4 86 80.2
vmacro01331 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 2.1e-36 156.4 88 77.3
vmacro05591 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 2.1e-36 156.4 88 77.3
vmacro23425 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 2.1e-36 156.4 88 77.3
Cfa009369 Carpinus fangiana HOM05D005988 ORTHO05D007392 2.8e-36 156.0 84 82.1
Haze_12418 Corylus avellana HOM05D005988 ORTHO05D007392 2.8e-36 156.0 84 82.1
ClCG11G013680 Citrullus lanatus HOM05D005988 ORTHO05D007392 3.6e-36 155.6 87 77.0
Atru.chr11.2323 Acer truncatum HOM05D005988 ORTHO05D007392 4.8e-36 155.2 86 81.4
CANSAT01G3258 Cannabis sativa HOM05D005988 ORTHO05D007392 4.8e-36 155.2 86 79.1
CiPaw.05G109900 Carya illinoinensis HOM05D005988 ORTHO05D007392 4.8e-36 155.2 86 79.1
COL.COLO4_20400 Corchorus olitorius HOM05D005988 ORTHO05D007392 4.8e-36 155.2 86 79.1
Gohir.D02G149200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 4.8e-36 155.2 86 79.1
Gorai.005G167100 Gossypium raimondii HOM05D005988 ORTHO05D007392 4.8e-36 155.2 86 79.1
Potri.001G055400 Populus trichocarpa HOM05D005988 ORTHO05D007392 4.8e-36 155.2 86 79.1
Hma1.2p1_0065F.1_g035500 Hydrangea macrophylla HOM05D005988 ORTHO05D007392 6.2e-36 154.8 85 78.8
CSS0025775 Camellia sinensis var. sinensis HOM05D005988 ORTHO05D007392 8.1e-36 154.5 86 77.9
Gohir.A03G126200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 1.1e-35 154.1 86 77.9
Potri.003G173000 Populus trichocarpa HOM05D005988 ORTHO05D007392 1.1e-35 154.1 86 79.1
Sabra01G0040000 Salix brachista HOM05D005988 ORTHO05D007392 1.4e-35 153.7 86 77.9
Sabra03G0126500 Salix brachista HOM05D005988 ORTHO05D007392 1.4e-35 153.7 86 77.9
Aqoxy3G00796 Aquilegia oxysepala HOM05D005988 ORTHO05D007392 1.8e-35 153.3 87 77.0
CDE06G1110 Ceratophyllum demersum HOM05D005988 ORTHO05D007392 1.8e-35 153.3 91 73.6
Cc11_g16890 Coffea canephora HOM05D005988 ORTHO05D007392 1.8e-35 153.3 84 81.0
Prupe.1G225900 Prunus persica HOM05D005988 ORTHO05D007392 1.8e-35 153.3 87 77.0
RcHm_v2.0_Chr4g0430261 Rosa chinensis HOM05D005988 ORTHO05D007392 1.8e-35 153.3 89 75.3
MBI01_g01248_MAGBIO Magnolia biondii HOM05D005988 ORTHO05D007392 2.4e-35 152.9 86 76.7
Cpa.g.sc43.58 Carica papaya HOM05D005988 ORTHO05D007392 3.1e-35 152.5 86 77.9
Ca_18034_v3 Cicer arietinum L. HOM05D005988 ORTHO05D007392 4.0e-35 152.1 83 80.7
Eucgr.B03491 Eucalyptus grandis HOM05D005988 ORTHO05D007392 4.0e-35 152.1 86 79.1
Rhsim12G0099600 Rhododendron simsii HOM05D005988 ORTHO05D007392 4.0e-35 152.1 88 75.0
Sed0026530 Sechium edule HOM05D005988 ORTHO05D007392 5.3e-35 151.8 87 77.0
THA.LOC109117182 Tarenaya hassleriana HOM05D005988 ORTHO05D007392 5.3e-35 151.8 86 76.7
Glyma.08G104300 Glycine max HOM05D005988 ORTHO05D007392 9.0e-35 151.0 84 77.4
FAN07G1208 Fragaria x ananassa HOM05D005988 ORTHO05D007392 1.5e-34 150.2 90 73.3
FAN12G0190 Fragaria x ananassa HOM05D005988 ORTHO05D007392 1.5e-34 150.2 90 73.3
FAN17G2984 Fragaria x ananassa HOM05D005988 ORTHO05D007392 1.5e-34 150.2 90 73.3
Glyma.05G147302 Glycine max HOM05D005988 ORTHO05D007392 1.5e-34 150.2 84 77.4
Nitab4.5_0006506g0010 Nicotiana tabacum HOM05D005988 ORTHO05D007392 1.5e-34 150.2 91 72.5
arahy.Tifrunner.gnm1.ann1.XY4E2W Arachis hypogaea HOM05D005988 ORTHO05D007392 2.0e-34 149.8 85 76.5
Nn4g22324 Nelumbo nucifera HOM05D005988 ORTHO05D007392 2.0e-34 149.8 85 75.3
Psat0s2314g0040 Pisum sativum HOM05D005988 ORTHO05D007392 2.0e-34 149.8 83 78.3
TPR.G34164 Trifolium pratense HOM05D005988 ORTHO05D007392 2.0e-34 149.8 84 77.4
GSVIVG01010482001 Vitis vinifera HOM05D005988 ORTHO05D007392 2.0e-34 149.8 90 72.2
Phvul.L002046 Phaseolus vulgaris HOM05D005988 ORTHO05D007392 2.6e-34 149.4 84 77.4
DCAR_031202 Daucus carota HOM05D005988 ORTHO05D007392 3.4e-34 149.1 87 71.3
Lalb_Chr07g0187141 Lupinus albus HOM05D005988 ORTHO05D007392 3.4e-34 149.1 85 74.1
arahy.Tifrunner.gnm1.ann1.5IUK3V Arachis hypogaea HOM05D005988 ORTHO05D007392 4.5e-34 148.7 85 75.3
arahy.Tifrunner.gnm1.ann1.CH2TLP Arachis hypogaea HOM05D005988 ORTHO05D007392 4.5e-34 148.7 85 75.3
arahy.Tifrunner.gnm1.ann1.NCU5C9 Arachis hypogaea HOM05D005988 ORTHO05D007392 4.5e-34 148.7 85 75.3
MELO3C011867.2 Cucumis melo HOM05D005988 ORTHO05D007392 4.5e-34 148.7 85 75.3
CsaV3_5G030290 Cucumis sativus L. HOM05D005988 ORTHO05D007392 4.5e-34 148.7 87 72.4
FvH4_4g23770 Fragaria vesca HOM05D005988 ORTHO05D007392 5.8e-34 148.3 89 73.0
Lalb_Chr13g0294321 Lupinus albus HOM05D005988 ORTHO05D007392 7.6e-34 147.9 88 70.5
Nitab4.5_0005361g0020 Nicotiana tabacum HOM05D005988 ORTHO05D007392 7.6e-34 147.9 89 73.0
QL03p052764 Quercus lobata HOM05D005988 ORTHO05D007392 7.6e-34 147.9 86 75.6
MD16G1119100 Malus domestica HOM05D005988 ORTHO05D007392 2.9e-33 146.0 82 78.0
Medtr8g080630 Medicago truncatula HOM05D005988 ORTHO05D007392 2.9e-33 146.0 83 77.1
TPR.G17077 Trifolium pratense HOM05D005988 ORTHO05D007392 3.8e-33 145.6 84 75.0
ATR0582G290 Amborella trichopoda HOM05D005988 ORTHO05D007392 6.4e-33 144.8 86 72.1
Lj4g0004056 Lotus japonicus HOM05D005988 ORTHO05D007392 8.4e-33 144.4 83 75.9
Aa31sc377G10 Aethionema arabicum HOM05D005988 ORTHO05D007392 1.4e-32 143.7 87 70.1
AL2G25900 Arabidopsis lyrata HOM05D005988 ORTHO05D007392 3.2e-32 142.5 86 70.9
AT1G67350 Arabidopsis thaliana HOM05D005988 ORTHO05D007392 3.2e-32 142.5 86 70.9
CAN.G875.9 Capsicum annuum HOM05D005988 ORTHO05D007392 3.2e-32 142.5 87 72.4
Thhalv10019308m.g Eutrema salsugineum HOM05D005988 ORTHO05D007392 5.4e-32 141.7 86 70.9
A07p33950 Brassica napus HOM05D005988 ORTHO05D007392 7.1e-32 141.4 85 71.8
CARHR059890 Cardamine hirsuta HOM05D005988 ORTHO05D007392 7.1e-32 141.4 86 69.8
ECA233G0411 Erigeron canadensis HOM05D005988 ORTHO05D007392 7.1e-32 141.4 85 71.8
Sp5g22300 Schrenkiella parvula HOM05D005988 ORTHO05D007392 7.1e-32 141.4 85 71.8
Actinidia08072 Actinidia chinensis HOM05D005988 ORTHO05D007392 1.2e-31 140.6 91 69.2
BcaB03g15204 Brassica carinata HOM05D005988 ORTHO05D007392 1.6e-31 140.2 85 70.6
BcaB05g24271 Brassica carinata HOM05D005988 ORTHO05D007392 1.6e-31 140.2 85 70.6
BcaB05g24277 Brassica carinata HOM05D005988 ORTHO05D007392 1.6e-31 140.2 85 70.6
BcaC03g14837 Brassica carinata HOM05D005988 ORTHO05D007392 1.6e-31 140.2 86 69.8
BcaC08g46168 Brassica carinata HOM05D005988 ORTHO05D007392 1.6e-31 140.2 85 70.6
C06p42910 Brassica napus HOM05D005988 ORTHO05D007392 1.6e-31 140.2 85 70.6
FAN22G1192 Fragaria x ananassa HOM05D005988 ORTHO05D007392 1.6e-31 140.2 85 71.8
A02p14180 Brassica napus HOM05D005988 ORTHO05D007392 2.1e-31 139.8 85 70.6
C02p22980 Brassica napus HOM05D005988 ORTHO05D007392 2.1e-31 139.8 85 70.6
BraA02t06481Z Brassica rapa HOM05D005988 ORTHO05D007392 2.1e-31 139.8 85 70.6
Carub.0002s1364 Capsella rubella HOM05D005988 ORTHO05D007392 2.7e-31 139.4 86 68.6
unitig_62.g23652 Utricularia gibba HOM05D005988 ORTHO05D007392 3.5e-31 139.0 85 69.4
PGSC0003DMG400017679 Solanum tuberosum HOM05D005988 ORTHO05D007392 7.9e-31 137.9 84 73.8
Solyc04g045620.3 Solanum lycopersicum HOM05D005988 ORTHO05D007392 1.8e-30 136.7 83 73.5
Sopen04g017580 Solanum pennellii HOM05D005988 ORTHO05D007392 1.8e-30 136.7 83 73.5
SalBow8G0976 Salvia bowleyana HOM05D005988 ORTHO05D007392 3.0e-30 136.0 85 72.9
HPP92_012485 Vanilla planifolia HOM05D005988 ORTHO05D007392 3.9e-30 135.6 83 74.7
Peaxi162Scf00038g00014 Petunia axillaris HOM05D005988 ORTHO05D007392 8.7e-30 134.4 88 68.2
Os03g0685900 Oryza sativa ssp. japonica HOM05D005988 ORTHO05D007392 1.1e-29 134.0 83 71.1
HanXRQChr12g0372221 Helianthus annuus HOM05D005988 ORTHO05D007392 1.5e-29 133.7 81 69.1
Nitab4.5_0000060g0090 Nicotiana tabacum HOM05D005988 ORTHO05D007392 3.3e-29 132.5 81 71.6
SGA_v2.0_scaffold144G35838 Striga asiatica HOM05D005988 ORTHO05D007392 1.3e-28 130.6 102 60.8
TWI75G1041 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 1.3e-28 130.6 86 72.1
MD13G1118900 Malus domestica HOM05D005988 ORTHO05D007392 6.2e-28 128.3 71 77.5
Lalb_Chr23g0278041 Lupinus albus HOM05D005988 ORTHO05D007392 8.1e-28 127.9 91 68.1
Zm00001eb422590 Zea mays HOM05D005988 ORTHO05D007392 8.1e-28 127.9 83 68.7
DCAR_024095 Daucus carota HOM05D005988 ORTHO05D007392 1.1e-27 127.5 86 65.1
Zm00001eb290200 Zea mays HOM05D005988 ORTHO05D007392 1.1e-27 127.5 83 68.7
Migut.E00018 Erythranthe guttata HOM05D005988 ORTHO05D007392 5.3e-27 125.2 85 67.1
TWI18G1296 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 2.0e-26 123.2 86 66.3
Lalb_Chr23g0278031 Lupinus albus HOM05D005988 ORTHO05D007392 3.4e-26 122.5 84 66.7
Lsat_1_v5_gn_7_95720 Lactuca sativa HOM05D005988 ORTHO05D007392 9.3e-24 114.4 70 65.7
Migut.G00897 Erythranthe guttata HOM05D005988 ORTHO05D007392 5.6e-21 105.1 70 70.0
Migut.O00848 Erythranthe guttata HOM05D005988 ORTHO05D007392 5.6e-21 105.1 70 70.0
CBR_g8533 Chara braunii HOM05D005988 ORTHO05D007392 6.2e-20 101.7 81 50.6
Pp3c3_5450 Physcomitrium patens HOM05D005988 ORTHO05D007392 1.8e-19 100.1 82 50.0
Mapoly0011s0010 Marchantia polymorpha HOM05D005988 ORTHO05D007392 8.4e-17 91.3 81 48.1
AagrBONN_evm.TU.Sc2ySwM_117.535 Anthoceros agrestis HOM05D005988 ORTHO05D007392 2.7e-15 86.3 78 46.2
Nitab4.5_0001404g0080 Nicotiana tabacum HOM05D005988 ORTHO05D007392 4.6e-15 85.5 55 63.6
TAR629G1917 Trochodendron aralioides HOM05D000133 ORTHO05D002928 1.9e-13 80.1 54 61.1
SMO356G0160 Selaginella moellendorffii HOM05D005988 ORTHO05D007392 2.5e-13 79.7 82 42.7
Actinidia30649 Actinidia chinensis HOM05D005988 ORTHO05D007392 6.5e-09 65.1 41 73.2
BcaB05g24274 Brassica carinata HOM05D005988 ORTHO05D007392 2.5e-08 63.2 86 45.3
arahy.Tifrunner.gnm1.ann1.BFR0IC Arachis hypogaea HOM05D005988 ORTHO05D007392 2.7e-07 59.7 56 50.0


User provided reference genes

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