Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc15g0005390 Simmondsia chinensis HOM05D006874 ORTHO05D008334 7.6e-184 647.1 349 100.0
EL10Ac1g02352 Beta vulgaris HOM05D006874 ORTHO05D008334 3.9e-39 166.4 377 36.9
Hund05278 Selenicereus undatus HOM05D006874 ORTHO05D008334 5.7e-38 162.5 361 36.3
AUR62037457 Chenopodium quinoa HOM05D006874 ORTHO05D008334 4.8e-37 159.5 362 35.1
AUR62035010 Chenopodium quinoa HOM05D006874 ORTHO05D008334 1.1e-33 148.3 373 32.2
Manes.18G049200 Manihot esculenta HOM05D006874 ORTHO05D008334 2.1e-32 144.1 386 31.6
TAR628G0654 Trochodendron aralioides HOM05D006874 ORTHO05D008334 4.7e-32 142.9 391 32.0
Duzib093G1642 Durio zibethinus HOM05D006874 ORTHO05D008334 5.2e-31 139.4 365 30.7
Manes.05G183400 Manihot esculenta HOM05D006874 ORTHO05D008334 8.8e-31 138.7 378 32.3
Thecc.08G084900 Theobroma cacao HOM05D006874 ORTHO05D008334 1.1e-30 138.3 364 31.0
QL12p038579 Quercus lobata HOM05D006874 ORTHO05D008334 1.5e-30 137.9 388 31.7
Duzib116G0206 Durio zibethinus HOM05D006874 ORTHO05D008334 2.0e-30 137.5 364 30.8
Dinv39206 Davidia involucrata HOM05D006874 ORTHO05D008334 2.6e-30 137.1 364 33.2
Cfa013741 Carpinus fangiana HOM05D006874 ORTHO05D008334 2.8e-29 133.7 373 33.2
Actinidia19297 Actinidia chinensis HOM05D006874 ORTHO05D008334 5.3e-28 129.4 359 32.9
Eucgr.F02227 Eucalyptus grandis HOM05D006874 ORTHO05D008334 2.6e-27 127.1 373 28.4
Prupe.1G419500 Prunus persica HOM05D006874 ORTHO05D008334 3.8e-26 123.2 364 30.8
MD08G1078600 Malus domestica HOM05D006874 ORTHO05D008334 5.0e-26 122.9 384 30.7
Oeu053642.1 Olea europaea HOM05D006874 ORTHO05D008334 8.5e-26 122.1 362 29.3
Potri.014G013200 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.5e-25 121.3 336 32.1
Potri.002G115600 Populus trichocarpa HOM05D006874 ORTHO05D008334 2.5e-25 120.6 372 31.5
Nitab4.5_0002796g0010 Nicotiana tabacum HOM05D006874 ORTHO05D008334 4.2e-25 119.8 351 33.3
Nitab4.5_0001426g0040 Nicotiana tabacum HOM05D006874 ORTHO05D008334 5.5e-25 119.4 345 33.3
TWI56G0226 Tripterygium wilfordii HOM05D006874 ORTHO05D008334 9.4e-25 118.6 361 30.7
Nn5g30659 Nelumbo nucifera HOM05D006874 ORTHO05D008334 2.3e-23 114.0 386 29.5
Rhsim06G0064400 Rhododendron simsii HOM05D006874 ORTHO05D008334 2.3e-23 114.0 352 29.5
Nn6g34522 Nelumbo nucifera HOM05D006874 ORTHO05D008334 3.0e-23 113.6 387 31.0
Haze_22393 Corylus avellana HOM05D006874 ORTHO05D008334 4.0e-23 113.2 359 32.3
Haze_22401 Corylus avellana HOM05D006874 ORTHO05D008334 4.0e-23 113.2 359 32.3
CANSAT25G0531 Cannabis sativa HOM05D006874 ORTHO05D008334 5.2e-23 112.8 365 27.7
Gohir.D05G215200 Gossypium hirsutum HOM05D006874 ORTHO05D008334 8.8e-23 112.1 363 29.2
Cpa.g.sc524.2 Carica papaya HOM05D006874 ORTHO05D008334 1.2e-22 111.7 364 29.7
FAN15G0895 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.2e-22 111.7 381 29.4
RcHm_v2.0_Chr6g0309981 Rosa chinensis HOM05D006874 ORTHO05D008334 2.6e-22 110.5 370 30.5
Sabra14G0008000 Salix brachista HOM05D006874 ORTHO05D008334 3.3e-22 110.2 364 31.0
PGR031G0049 Punica granatum HOM05D006874 ORTHO05D008334 5.7e-22 109.4 372 28.5
vmacro21419 Vaccinium macrocarpon HOM05D006874 ORTHO05D008334 5.7e-22 109.4 362 29.3
PGSC0003DMG400004918 Solanum tuberosum HOM05D006874 ORTHO05D008334 7.5e-22 109.0 351 29.1
PSO675G5853 Papaver somniferum HOM05D006874 ORTHO05D008334 9.7e-22 108.6 391 28.4
Gorai.009G221900 Gossypium raimondii HOM05D006874 ORTHO05D008334 2.8e-21 107.1 363 28.7
Atru.chr13.867 Acer truncatum HOM05D006874 ORTHO05D008334 6.3e-21 105.9 293 33.1
Gohir.A05G211900 Gossypium hirsutum HOM05D006874 ORTHO05D008334 8.2e-21 105.5 363 29.2
FAN27G0759 Fragaria x ananassa HOM05D006874 ORTHO05D008334 2.4e-20 104.0 379 29.6
PSO541G5864 Papaver somniferum HOM05D006874 ORTHO05D008334 4.1e-20 103.2 380 28.4
Psat5g037000 Pisum sativum HOM05D006874 ORTHO05D008334 7.0e-20 102.4 356 30.6
Gohir.D06G022500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 9.1e-20 102.1 353 28.0
Gorai.010G027100 Gossypium raimondii HOM05D006874 ORTHO05D008334 1.2e-19 101.7 353 28.0
Psat0s1031g0080 Pisum sativum HOM05D006874 ORTHO05D008334 1.2e-19 101.7 354 30.2
Aqoxy6G02484 Aquilegia oxysepala HOM05D006874 ORTHO05D008334 1.6e-19 101.3 395 26.8
Gohir.A06G025400 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.6e-19 101.3 353 28.0
Actinidia10219 Actinidia chinensis HOM05D006874 ORTHO05D008334 2.7e-19 100.5 354 27.1
FvH4_2g32690 Fragaria vesca HOM05D006874 ORTHO05D008334 7.7e-19 99.0 379 29.3
MBI16_g45151_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 7.7e-19 99.0 355 28.7
CiPaw.07G172200 Carya illinoinensis HOM05D006874 ORTHO05D008334 1.0e-18 98.6 351 28.8
Medtr3g103400 Medicago truncatula HOM05D006874 ORTHO05D008334 1.3e-18 98.2 373 27.9
Dinv09539 Davidia involucrata HOM05D006874 ORTHO05D008334 2.2e-18 97.4 362 29.0
MSTRG.24387 Avicennia marina HOM05D006874 ORTHO05D008334 2.9e-18 97.1 354 27.4
Solyc04g077535.1 Solanum lycopersicum HOM05D006874 ORTHO05D008334 2.5e-17 94.0 353 28.0
Ciclev10016010m.g Citrus clementina HOM05D006874 ORTHO05D008334 4.2e-17 93.2 353 26.1
Cc10_g07600 Coffea canephora HOM05D006874 ORTHO05D008334 9.4e-17 92.0 356 27.5
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 9.4e-17 92.0 372 28.2
Lj1g0014879 Lotus japonicus HOM05D006874 ORTHO05D008334 1.2e-16 91.7 362 28.5
Sabra02G0091300 Salix brachista HOM05D006874 ORTHO05D008334 1.2e-16 91.7 350 28.3
Migut.C00474 Erythranthe guttata HOM05D006874 ORTHO05D008334 3.0e-15 87.0 351 26.8
SalBow7G3254 Salvia bowleyana HOM05D006874 ORTHO05D008334 3.0e-15 87.0 346 26.0
ATR0739G189 Amborella trichopoda HOM05D006874 ORTHO05D008334 5.2e-15 86.3 335 25.7
Lalb_Chr23g0267621 Lupinus albus HOM05D006874 ORTHO05D008334 5.2e-15 86.3 368 28.5
Manes.07G056800 Manihot esculenta HOM05D006874 ORTHO05D008334 4.4e-14 83.2 179 37.4
MD15G1065400 Malus domestica HOM05D006874 ORTHO05D008334 5.7e-14 82.8 198 34.3
TPR.G13116 Trifolium pratense HOM05D006874 ORTHO05D008334 9.8e-14 82.0 363 27.0
Sabra16G0181500 Salix brachista HOM05D006874 ORTHO05D008334 2.8e-13 80.5 368 26.4
Medtr1g017530 Medicago truncatula HOM05D006874 ORTHO05D008334 8.3e-13 79.0 363 26.2
Glyma.14G089075 Glycine max HOM05D006874 ORTHO05D008334 1.8e-12 77.8 373 28.2
Glyma.17G233100 Glycine max HOM05D006874 ORTHO05D008334 3.1e-12 77.0 369 26.8
CSS0036555 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 7.0e-12 75.9 191 28.3
Sopen04g031160 Solanum pennellii HOM05D006874 ORTHO05D008334 1.2e-11 75.1 237 29.5
Potri.009G085500 Populus trichocarpa HOM05D006874 ORTHO05D008334 4.5e-11 73.2 377 27.6
arahy.Tifrunner.gnm1.ann1.0IC8QA Arachis hypogaea HOM05D006874 ORTHO05D008334 5.9e-11 72.8 248 31.5
MSTRG.25026 Avicennia marina HOM05D006874 ORTHO05D008334 7.7e-11 72.4 240 27.9
Ca_15889_v3 Cicer arietinum L. HOM05D006874 ORTHO05D008334 1.3e-10 71.6 367 25.9
Potri.001G290000 Populus trichocarpa HOM05D006874 ORTHO05D008334 2.3e-10 70.9 365 24.4
TAR625G1551 Trochodendron aralioides HOM05D006874 ORTHO05D008334 2.3e-10 70.9 120 35.0
Hma1.2p1_1170F.1_g263450 Hydrangea macrophylla HOM05D006874 ORTHO05D008334 5.0e-10 69.7 117 35.0
CiPaw.06G164000 Carya illinoinensis HOM05D006874 ORTHO05D008334 2.5e-09 67.4 381 24.7
DCAR_020062 Daucus carota HOM05D006874 ORTHO05D008334 4.2e-09 66.6 341 27.3
Glyma.06G048600 Glycine max HOM05D006874 ORTHO05D008334 4.2e-09 66.6 383 24.5
Phvul.001G029700 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 4.2e-09 66.6 364 25.5
QL11p029345 Quercus lobata HOM05D006874 ORTHO05D008334 4.2e-09 66.6 357 26.1
Lj5g0027457 Lotus japonicus HOM05D006874 ORTHO05D008334 5.5e-09 66.2 289 28.4
Ah.00g238010 Amaranthus hybridus HOM05D024306 ORTHO05D012960 9.5e-09 65.5 350 25.1
COL.COLO4_28465 Corchorus olitorius HOM05D006874 ORTHO05D008334 1.6e-08 64.7 141 36.2
Psat6g017400 Pisum sativum HOM05D006874 ORTHO05D008334 1.6e-08 64.7 361 25.2
FAN24G0724 Fragaria x ananassa HOM05D006874 ORTHO05D008334 2.8e-08 63.9 204 29.4
TAR376G0413 Trochodendron aralioides HOM05D006874 ORTHO05D008334 2.8e-08 63.9 146 34.9
VMungo1309G0435 Vigna mungo HOM05D006874 ORTHO05D008334 1.8e-07 61.2 385 26.0
Phvul.009G073900 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 2.3e-07 60.8 390 26.2
CSS0047478 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 4.0e-07 60.1 350 24.6
CSS0007120 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 5.2e-07 59.7 349 24.4
MBI16_g41242_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 2.0e-06 57.8 263 28.1
Ah.00g238020 Amaranthus hybridus HOM05D024306 ORTHO05D012960 5.7e-06 56.2 350 23.4
CsaV3_4G035240 Cucumis sativus L. HOM05D006874 ORTHO05D008334 5.7e-06 56.2 375 26.9
Ah.11g039280 Amaranthus hybridus HOM05D024306 ORTHO05D012960 9.8e-06 55.5 193 25.9


User provided reference genes

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