Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc15g0005020 Simmondsia chinensis HOM05D007378 ORTHO05D007577 0.0e+00 1288.5 683 100.0
Hund05208 Selenicereus undatus HOM05D007378 ORTHO05D007577 1.5e-71 275.0 707 34.7
Dinv31841 Davidia involucrata HOM05D007378 ORTHO05D007577 8.7e-67 259.2 728 33.2
Dinv39514 Davidia involucrata HOM05D007378 ORTHO05D007577 9.0e-64 249.2 692 34.4
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla HOM05D007378 ORTHO05D007577 3.2e-61 240.7 715 32.7
QL02p011519 Quercus lobata HOM05D007378 ORTHO05D007577 1.6e-60 238.4 750 31.2
Duzib093G0923 Durio zibethinus HOM05D007378 ORTHO05D007577 1.5e-58 231.9 755 31.4
AUR62033831 Chenopodium quinoa HOM05D007378 ORTHO05D007577 2.5e-58 231.1 677 32.9
Prupe.1G365800 Prunus persica HOM05D007378 ORTHO05D007577 5.3e-56 223.4 730 30.3
Haze_22630 Corylus avellana HOM05D007378 ORTHO05D007577 2.6e-55 221.1 743 29.9
MD15G1012700 Malus domestica HOM05D007378 ORTHO05D007577 3.4e-55 220.7 742 31.1
Cfa013945 Carpinus fangiana HOM05D007378 ORTHO05D007577 4.5e-55 220.3 739 30.4
CSS0021578 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 8.5e-54 216.1 770 29.0
Thecc.08G043900 Theobroma cacao HOM05D007378 ORTHO05D007577 2.7e-52 211.1 773 29.5
COL.COLO4_26152 Corchorus olitorius HOM05D007378 ORTHO05D007577 8.8e-51 206.1 696 30.7
MD08G1013300 Malus domestica HOM05D007378 ORTHO05D007577 2.6e-50 204.5 744 30.4
Cpa.g.sc26.38 Carica papaya HOM05D007378 ORTHO05D007577 3.7e-49 200.7 719 29.6
CiPaw.07G150400 Carya illinoinensis HOM05D007378 ORTHO05D007577 7.0e-48 196.4 672 30.2
CiPaw.08G066200 Carya illinoinensis HOM05D007378 ORTHO05D007577 7.0e-48 196.4 717 31.5
GSVIVG01009901001 Vitis vinifera HOM05D007378 ORTHO05D007577 7.0e-48 196.4 583 32.2
AUR62035752 Chenopodium quinoa HOM05D007378 ORTHO05D007577 1.5e-47 195.3 608 32.7
Potri.005G238800 Populus trichocarpa HOM05D007378 ORTHO05D007577 2.2e-46 191.4 764 29.6
Ciclev10000382m.g Citrus clementina HOM05D007378 ORTHO05D007577 1.4e-45 188.7 754 30.1
Potri.002G022800 Populus trichocarpa HOM05D007378 ORTHO05D007577 2.5e-45 188.0 761 30.7
Sabra02G0018600 Salix brachista HOM05D007378 ORTHO05D007577 3.0e-43 181.0 768 29.3
Duzib116G0067 Durio zibethinus HOM05D007378 ORTHO05D007577 2.0e-42 178.3 699 28.8
RcHm_v2.0_Chr6g0302801 Rosa chinensis HOM05D007378 ORTHO05D007577 9.7e-42 176.0 753 31.1
Manes.05G147800 Manihot esculenta HOM05D007378 ORTHO05D007577 1.4e-40 172.2 676 30.5
FvH4_2g38520 Fragaria vesca HOM05D007378 ORTHO05D007577 7.0e-40 169.9 739 30.4
TWI12G0183 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 1.0e-38 166.0 781 29.4
TAR381G0696 Trochodendron aralioides HOM05D007378 ORTHO05D007577 1.7e-38 165.2 679 29.6
Actinidia15419 Actinidia chinensis HOM05D007378 ORTHO05D007577 1.9e-37 161.8 708 28.7
FAN27G0575 Fragaria x ananassa HOM05D007378 ORTHO05D007577 2.5e-37 161.4 747 29.7
Rhsim07G0247100 Rhododendron simsii HOM05D007378 ORTHO05D007577 1.0e-35 156.0 695 27.9
FAN20G0665 Fragaria x ananassa HOM05D007378 ORTHO05D007577 1.8e-35 155.2 697 29.6
Glyma.04G024500 Glycine max HOM05D007378 ORTHO05D007577 1.5e-34 152.1 720 28.5
Manes.18G013740 Manihot esculenta HOM05D007378 ORTHO05D007577 1.5e-34 152.1 675 28.1
Lj1g0027004 Lotus japonicus HOM05D007378 ORTHO05D007577 5.7e-34 150.2 730 28.8
Glyma.06G024600 Glycine max HOM05D007378 ORTHO05D007577 9.7e-34 149.4 742 28.7
Atru.chr13.296 Acer truncatum HOM05D007378 ORTHO05D007577 1.3e-33 149.1 501 30.9
Actinidia16984 Actinidia chinensis HOM05D007378 ORTHO05D007577 1.1e-32 146.0 639 27.7
FAN15G3724 Fragaria x ananassa HOM05D007378 ORTHO05D007577 1.1e-32 146.0 776 27.7
Sabra05G0184500 Salix brachista HOM05D007378 ORTHO05D007577 1.4e-32 145.6 728 28.2
TWI56G0017 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 1.4e-32 145.6 696 28.3
Psat5g013200 Pisum sativum HOM05D007378 ORTHO05D007577 1.6e-31 142.1 711 27.1
Ca_15483_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 2.7e-31 141.4 717 26.5
CSS0010969 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 3.5e-31 141.0 377 34.2
MBI05_g30742_MAGBIO Magnolia biondii HOM05D007378 ORTHO05D007577 5.9e-31 140.2 743 29.6
VMungo0647G1459 Vigna mungo HOM05D007378 ORTHO05D007577 5.0e-30 137.1 682 27.0
DCAR_013867 Daucus carota HOM05D007378 ORTHO05D007577 1.9e-29 135.2 708 26.7
vmacro21724 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 1.9e-29 135.2 550 31.8
Glyma.17G258000 Glycine max HOM05D007378 ORTHO05D007577 2.5e-29 134.8 669 26.9
arahy.Tifrunner.gnm1.ann1.WP2VUZ Arachis hypogaea HOM05D007378 ORTHO05D007577 2.7e-28 131.3 694 27.5
TWI36G1616 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 6.1e-28 130.2 773 26.0
VMungo1309G2950 Vigna mungo HOM05D007378 ORTHO05D007577 6.1e-28 130.2 718 27.6
Phvul.009G016700 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 8.0e-28 129.8 689 27.6
Lalb_Chr11g0061931 Lupinus albus HOM05D007378 ORTHO05D007577 1.0e-27 129.4 729 26.3
Sopen04g035030 Solanum pennellii HOM05D007378 ORTHO05D007577 3.0e-27 127.9 690 27.2
arahy.Tifrunner.gnm1.ann1.KUKA7T Arachis hypogaea HOM05D007378 ORTHO05D007577 6.8e-27 126.7 695 27.9
Medtr3g113840 Medicago truncatula HOM05D007378 ORTHO05D007577 6.8e-27 126.7 720 26.1
CANSAT25G3202 Cannabis sativa HOM05D007378 ORTHO05D007577 1.2e-26 125.9 712 27.2
Lj5g0002996 Lotus japonicus HOM05D007378 ORTHO05D007577 1.2e-26 125.9 672 27.1
Nitab4.5_0002561g0040 Nicotiana tabacum HOM05D007378 ORTHO05D007577 1.5e-26 125.6 663 27.8
Glyma.14G219000 Glycine max HOM05D007378 ORTHO05D007577 7.5e-26 123.2 687 25.6
Eucgr.F00598 Eucalyptus grandis HOM05D007378 ORTHO05D007577 9.8e-26 122.9 732 26.4
Solyc04g081420.4 Solanum lycopersicum HOM05D007378 ORTHO05D007577 9.8e-26 122.9 686 27.7
PGSC0003DMG400009935 Solanum tuberosum HOM05D007378 ORTHO05D007577 5.4e-24 117.1 670 26.4
TPR.G34540 Trifolium pratense HOM05D007378 ORTHO05D007577 5.4e-24 117.1 682 26.2
Nn5g30152 Nelumbo nucifera HOM05D007378 ORTHO05D007577 2.0e-23 115.2 658 27.2
PGR031G0679 Punica granatum HOM05D007378 ORTHO05D007577 2.7e-23 114.8 691 24.7
CAN.G311.27 Capsicum annuum HOM05D007378 ORTHO05D007577 5.9e-23 113.6 667 27.1
Phvul.001G006800 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 1.7e-22 112.1 685 25.7
Cc10_g01700 Coffea canephora HOM05D007378 ORTHO05D007577 1.5e-21 109.0 706 27.3
Peaxi162Scf00438g00718 Petunia axillaris HOM05D007378 ORTHO05D007577 3.3e-21 107.8 675 26.4
Oeu020868.1 Olea europaea HOM05D007378 ORTHO05D007577 5.5e-21 107.1 623 25.0
Ca_13427_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 1.2e-20 105.9 647 25.8
Duzib041G0240 Durio zibethinus HOM05D007378 ORTHO05D007577 2.1e-20 105.1 221 37.6
Duzib041G0283 Durio zibethinus HOM05D007378 ORTHO05D007577 3.6e-20 104.4 410 26.8
TPR.G26373 Trifolium pratense HOM05D007378 ORTHO05D007577 6.1e-20 103.6 688 26.2
Medtr1g025180 Medicago truncatula HOM05D007378 ORTHO05D007577 6.8e-19 100.1 673 23.9
CSS0024961 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 7.5e-18 96.7 206 39.3
PSO700G0360 Papaver somniferum HOM05D007378 ORTHO05D007577 9.8e-18 96.3 614 27.4
TAR625G0788 Trochodendron aralioides HOM05D000628 ORTHO05D001121 1.7e-17 95.5 140 42.9
SalBow7G4715 Salvia bowleyana HOM05D007378 ORTHO05D007577 6.3e-17 93.6 523 29.3
CSS0029124 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 3.1e-16 91.3 266 33.1
Lalb_Chr08g0246161 Lupinus albus HOM05D007378 ORTHO05D007577 5.4e-16 90.5 647 25.2
MSTRG.25246 Avicennia marina HOM05D007378 ORTHO05D007577 1.6e-15 89.0 612 26.0
PSO170G0005 Papaver somniferum HOM05D007378 ORTHO05D007577 3.5e-15 87.8 611 28.0
AT1G75730 Arabidopsis thaliana HOM05D010473 ORTHO05D007577 2.3e-14 85.1 698 26.8
Sp5g30850 Schrenkiella parvula HOM05D010473 ORTHO05D007577 1.2e-12 79.3 495 28.5
AL2G35720 Arabidopsis lyrata HOM05D010473 ORTHO05D007577 2.1e-12 78.6 480 27.7
C02p33740 Brassica napus HOM05D010473 ORTHO05D007577 6.8e-11 73.6 153 39.2
Aqoxy5G01785 Aquilegia oxysepala HOM05D007378 ORTHO05D007577 1.2e-10 72.8 568 25.7
Thhalv10018322m.g Eutrema salsugineum HOM05D010473 ORTHO05D007577 2.6e-10 71.6 444 25.5
Psat6g003040 Pisum sativum HOM05D007378 ORTHO05D007577 4.4e-10 70.9 617 23.5
THA.LOC104814031 Tarenaya hassleriana HOM05D010473 ORTHO05D007577 1.7e-09 68.9 444 27.5
BcaB05g24937 Brassica carinata HOM05D010473 ORTHO05D007577 2.9e-09 68.2 434 27.2
Carub.0002s2258 Capsella rubella HOM05D010473 ORTHO05D007577 2.9e-09 68.2 440 27.5
CARHR069140 Cardamine hirsuta HOM05D010473 ORTHO05D007577 2.9e-09 68.2 165 35.8
Migut.C00828 Erythranthe guttata HOM05D007378 ORTHO05D007577 1.4e-08 65.9 515 25.4
A02p20200 Brassica napus HOM05D010473 ORTHO05D007577 2.4e-08 65.1 512 26.0
BraA02t07054Z Brassica rapa HOM05D010473 ORTHO05D007577 3.2e-08 64.7 511 26.2
BolC2t09331H Brassica oleracea HOM05D010473 ORTHO05D007577 7.0e-08 63.5 491 26.1
SGA_v2.0_scaffold92G28233 Striga asiatica HOM05D007378 ORTHO05D007577 5.0e-06 57.4 136 38.2


User provided reference genes

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