Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc15g0004960 Simmondsia chinensis HOM05D007760 ORTHO05D008337 3.3e-139 498.4 261 100.0
Hund05187 Selenicereus undatus HOM05D030748 ORTHO05D008337 8.9e-20 101.7 296 32.8
CSS0044946 Camellia sinensis var. sinensis HOM05D007760 ORTHO05D008337 1.5e-14 84.3 286 33.6
Dinv39521 Davidia involucrata HOM05D007760 ORTHO05D008337 1.2e-13 81.3 211 34.6
MSTRG.24243 Avicennia marina HOM05D007760 ORTHO05D008337 2.8e-13 80.1 173 38.2
TAR625G0557 Trochodendron aralioides HOM05D007760 ORTHO05D008337 4.0e-12 76.3 298 30.2
Nitab4.5_0009651g0030 Nicotiana tabacum HOM05D007760 ORTHO05D008337 5.2e-12 75.9 247 30.0
Migut.C00840 Erythranthe guttata HOM05D007760 ORTHO05D008337 4.4e-11 72.8 297 31.0
Dinv31848 Davidia involucrata HOM05D007760 ORTHO05D008337 9.9e-11 71.6 297 30.3
Medtr1g025290 Medicago truncatula HOM05D007760 ORTHO05D008337 9.9e-11 71.6 188 33.5
Rhsim06G0021400 Rhododendron simsii HOM05D007760 ORTHO05D008337 2.2e-10 70.5 281 31.0
SGA_v2.0_scaffold11G05919 Striga asiatica HOM05D007760 ORTHO05D008337 8.4e-10 68.6 298 30.2
Cpa.g.sc26.48 Carica papaya HOM05D007760 ORTHO05D008337 3.2e-09 66.6 267 31.5
Gohir.A06G003800 Gossypium hirsutum HOM05D007760 ORTHO05D008337 5.4e-09 65.9 203 33.0
TAR381G0719 Trochodendron aralioides HOM05D007760 ORTHO05D008337 5.4e-09 65.9 164 35.4
Gorai.010G004000 Gossypium raimondii HOM05D007760 ORTHO05D008337 1.2e-08 64.7 251 30.3
TPR.G20837 Trifolium pratense HOM05D007760 ORTHO05D008337 1.2e-08 64.7 301 28.9
Peaxi162Scf00438g00084 Petunia axillaris HOM05D021694 ORTHO05D008337 1.6e-08 64.3 273 27.5
Ciclev10001832m.g Citrus clementina HOM05D007760 ORTHO05D008337 2.1e-08 63.9 215 29.8
Oeu027538.2 Olea europaea HOM05D007760 ORTHO05D008337 2.1e-08 63.9 299 30.8
AUR62033901 Chenopodium quinoa HOM05D030748 ORTHO05D008337 2.7e-08 63.5 88 40.9
Manes.18G013300 Manihot esculenta HOM05D007760 ORTHO05D008337 2.7e-08 63.5 198 31.3
RhsimUnG0065900 Rhododendron simsii HOM05D007760 ORTHO05D008337 3.5e-08 63.2 275 31.6
Oeu046271.1 Olea europaea HOM05D007760 ORTHO05D008337 4.6e-08 62.8 284 29.9
EL10Ac1g02191 Beta vulgaris HOM05D030748 ORTHO05D008337 6.0e-08 62.4 144 35.4
Duzib116G0858 Durio zibethinus HOM05D007760 ORTHO05D008337 6.0e-08 62.4 174 31.6
TWI56G0173 Tripterygium wilfordii HOM05D007760 ORTHO05D008337 7.8e-08 62.0 284 29.6
Migut.N03163 Erythranthe guttata HOM05D007760 ORTHO05D008337 1.0e-07 61.6 275 29.5
Gohir.D06G006600 Gossypium hirsutum HOM05D007760 ORTHO05D008337 1.7e-07 60.8 228 28.9
Actinidia15424 Actinidia chinensis HOM05D007760 ORTHO05D008337 2.3e-07 60.5 274 29.6
Rhsim07G0247700 Rhododendron simsii HOM05D007760 ORTHO05D008337 2.3e-07 60.5 186 32.3
Prupe.1G364900 Prunus persica HOM05D015458 ORTHO05D008337 5.1e-07 59.3 168 32.1
Gohir.A06G003700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 1.5e-06 57.8 228 28.1
MSTRG.1190 Avicennia marina HOM05D007760 ORTHO05D008337 1.9e-06 57.4 280 28.6
Nitab4.5_0025981g0010 Nicotiana tabacum HOM05D007760 ORTHO05D008337 1.9e-06 57.4 163 31.9
Psat6g002640 Pisum sativum HOM05D007760 ORTHO05D008337 1.9e-06 57.4 160 34.4
RhsimUnG0066000 Rhododendron simsii HOM05D007760 ORTHO05D008337 1.9e-06 57.4 279 29.7
SalBow7G2592 Salvia bowleyana HOM05D007760 ORTHO05D008337 1.9e-06 57.4 279 29.7
VMungo1309G0539 Vigna mungo HOM05D007760 ORTHO05D008337 1.9e-06 57.4 262 27.9
Duzib041G0564 Durio zibethinus HOM05D007760 ORTHO05D008337 2.5e-06 57.0 183 31.1
MELO3C011015.2 Cucumis melo HOM05D016278 ORTHO05D008337 3.3e-06 56.6 154 30.5
Gorai.010G003900 Gossypium raimondii HOM05D007760 ORTHO05D008337 3.3e-06 56.6 267 27.0
TWI36G1437 Tripterygium wilfordii HOM05D007760 ORTHO05D008337 3.3e-06 56.6 295 28.1
Thecc.08G044900 Theobroma cacao HOM05D007760 ORTHO05D008337 4.3e-06 56.2 168 30.4
EL10Ac1g02192 Beta vulgaris HOM05D030748 ORTHO05D008337 5.6e-06 55.8 206 28.6
Nitab4.5_0000192g0190 Nicotiana tabacum HOM05D021694 ORTHO05D008337 5.6e-06 55.8 265 29.1
MD08G1012900 Malus domestica HOM05D015458 ORTHO05D008337 7.3e-06 55.5 221 26.2
SalBow8G4233 Salvia bowleyana HOM05D007760 ORTHO05D008337 9.6e-06 55.1 267 30.3


User provided reference genes

Program Settings