Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc15g0003580 Simmondsia chinensis HOM05D009209 ORTHO05D011705 7.6e-132 473.8 230 100.0
Sc17g0002300 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.9e-45 186.8 250 46.4
Sc15g0001330 Simmondsia chinensis HOM05D009209 ORTHO05D011705 2.7e-44 183.0 158 58.9
Sc14g0002520 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.3e-43 180.6 149 61.7
Sc21g0004040 Simmondsia chinensis HOM05D009209 ORTHO05D011705 8.6e-43 177.9 167 55.1
Sc03g0004550 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.5e-39 167.2 111 68.5
Sc17g0002350 Simmondsia chinensis HOM05D009209 ORTHO05D011705 4.6e-36 155.6 93 73.1
Sc03g0004450 Simmondsia chinensis HOM05D009209 ORTHO05D011705 6.8e-32 141.7 93 69.9
Sc11g0007070 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.6e-28 130.6 102 58.8
Sc15g0000880 Simmondsia chinensis HOM05D009209 ORTHO05D011705 7.1e-13 78.6 44 72.7
CSS0025340 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 6.0e-12 75.5 90 43.3
Sc01g0007590 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.3e-11 74.3 40 75.0
CSS0000615 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 1.8e-11 73.9 90 43.3
CSS0042161 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 1.8e-11 73.9 90 43.3
CSS0004424 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 6.7e-11 72.0 143 31.5
vmacro01896 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 6.7e-11 72.0 183 25.7
CSS0028826 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 2.8e-09 66.6 91 39.6
Sc02g0007350 Simmondsia chinensis HOM05D011136 ORTHO05D010856 1.1e-08 64.7 82 32.9
arahy.Tifrunner.gnm1.ann1.2029P5 Arachis hypogaea HOM05D012808 ORTHO05D011705 2.4e-08 63.5 89 36.0
Actinidia11343 Actinidia chinensis HOM05D019814 ORTHO05D009356 3.1e-08 63.2 132 31.1
Sc15g0000710 Simmondsia chinensis HOM05D009209 ORTHO05D011705 6.9e-08 62.0 66 50.0
Sc16g0001350 Simmondsia chinensis HOM05D009348 ORTHO05D010856 1.2e-07 61.2 75 36.0
vmacro00512 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 1.5e-07 60.8 90 33.3
Rhsim09G0140400 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.6e-07 60.1 111 29.7
Rhsim11G0140400 Rhododendron simsii HOM05D000026 ORTHO05D009356 2.6e-07 60.1 97 32.0
RhsimUnG0239600 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.6e-07 60.1 97 33.0
Rhsim04G0141400 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.4e-07 59.7 97 32.0
vmacro12106 Vaccinium macrocarpon HOM05D000081 ORTHO05D009356 5.8e-07 58.9 105 32.4
Sc14g0002620 Simmondsia chinensis HOM05D009209 ORTHO05D011705 7.6e-07 58.5 30 80.0
Sc06g0004220 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.0e-06 58.2 89 28.1
vmacro21269 Vaccinium macrocarpon HOM05D005003 ORTHO05D006220 1.3e-06 57.8 66 36.4
Rhsim04G0090900 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.7e-06 57.4 97 33.0
Rhsim07G0230400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.7e-06 57.4 78 33.3
Sc18g0006260 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.7e-06 57.4 90 26.7
vmacro21908 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 1.7e-06 57.4 60 36.7
Sc13g0006150 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.2e-06 57.0 103 27.2
Psat5g038560 Pisum sativum HOM05D007807 ORTHO05D001516 2.9e-06 56.6 90 28.9
Actinidia34556 Actinidia chinensis HOM05D008219 ORTHO05D009356 6.4e-06 55.5 60 40.0
CSS0009574 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 6.4e-06 55.5 90 35.6
Sc18g0002450 Simmondsia chinensis HOM05D006933 ORTHO05D009629 8.4e-06 55.1 103 26.2


User provided reference genes

Program Settings